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Report for Sequence Feature Glyma.14g159800

Feature Type:gene_model
Chromosome:Gm14
Start:36473317
stop:36483793
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g159800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53180.1AT polypyrimidine tract-binding protein 2 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003723GO-mf RNA binding EnsemblGenomesN/AIEA
KOG1190 KOG Polypyrimidine tract-binding protein JGI N/AIEA
PTHR11546Panther HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN JGI N/AIEA
PTHR11546:SF16Panther POLYPYRIMIDINE TRACT-BINDING PROTEIN HOMOLOG 1 JGI N/AIEA
PF00076PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Expression Patterns of Glyma.14g159800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.14g159800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g30490 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.14g159800
>Glyma.14g159800.2 sequence-type=transcript locus=Glyma.14g159800 ID=Glyma.14g159800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CATCTTTGGGTTGGGTTATCTGAAGCTTCTCCTGCGGAGGAAACATAACAGCGCTTGTTTGGGAACCCTAGTTTGGCAAACATTTCAAGAATCAGAGTCTTTTACCACTCTCAGGTTTAGCATTATTATCTGAAATGGCATCGGTGTCTAGTCAGCAACAGTTCCGTTACACGCAGCCACCGTCAAAGGTTCTTCATTTGAGAAATTTGCCGTGGGAGTGTACAGAGGAGGAACTAATTGAGCTTGGGAAGCCATTTGGGAAAGTTGTGAACACAAAGTGCAACGTTGGAGCAAATCGTAATCAAGCTTTTATTGAATTTGCAGATTTAAATCAGGCGATTGCAATGATATCGTATTATGCCTCATCGTCGGAGCCTGCTCAAGTACGAGGGAAAACTGTGTATCTACAATATTCCAATAGGCAAGAAATAGTGAATAACAAAACTGCAGCAGATGTTGCTGGAAATGTACTGTTAGTTACAATTGAGGGTGAAGATGCACGCCTTGTCAGCATTGATGTCTTACACTTGGTCTTTTCAGCCTTTGGGTTTGTGCATAAGATTACTACTTTTGAGAAGACAGCAGGATTCCAGGCATTGGTGCAATTCTCAGATGCAGAAACTGCTACTTCTGCAAAGGATGCTTTGGATGGAAGAAGCATACCTAGGTACCTGCTTCCTGAACATATGGGACCATGTAGCCTTAAGATCACATATTCTGGACATTCAGACTTAAGTGTCAAGTTTCAAAGTCACAGAAGCAGAGACTACACTAATCCTTACCTCCCTGTTGCTCAATCTGCCATGGAGGGAAGTGGACAGCCCATGGTGGGTTTGGATGGAAAGAGGCTGGAGGCCGAGAGTAATGTTCTTCTTGCATCTATTGAGAACATGCAGTATGCTGTAACCTTGGATGTCTTACACATGGTTTTCTCTGCCTTTGGACCTGTCCAAAAGATTGCAATGTTTGACAAGAATGGTGGTTTACAGGCTCTGATTCAATATCCAGATATCCAAACAGCTGTTGTGGCCAAGGAAGCCTTGGAAGGACACTGCATATATGATGGAGGTTTTTGCAAGCTTCACATCTCGTATTCGCGTCATTCTGATCTTAGTATAAAGGTGAATAATGATAGAAGTAGAGACTATACTATTCCTAATGTACCACCACCTGTAGTGAATGCTCAGCCCTCAATTTTAGGGCAACATCCAGTTCCCATGACGGGTCCTCCTCCTCAACAGTACAATGGAGCTCAATACGCATCAGTTACTGAGCAGACTCTGATGCCTCAATCTCAGGCTGGATGGGGGACAGCTCCATCTCAGTCTATGCTGCAGATGCATAACAATCCTTACACGCCATCTGCTATGGTGCCACCGCAAACAGCCCCTGGAATGCAGTTTCCAAGTCACATTCAATAGCATCATGCATCTCATGTCTCTTACACAAAGTGGCGAACATAGTCAGCGCATCTGCAGAAGTGAGGACTACCATTTAAATTGTGGCTTTTCCTATGTGAGGAAACTGGCGTTTGCCAATGTGATTCCAAAATTCTCTCTCCCTTTGTTTATTATTAGATGAGATGAGATTTTGATTGTAAGCAATTGGCCAAGAACTTTTGGTTGGCTGGCAACACAGGAAAAAACTACACATTCTATTTTTCGTTTATTTTGACTTGGTTTGGCATTTGTTTTTCAGATATTGCTTTAAAAAAGTTAACAAGGCAATGAAATAAAAGTTGTTAATGGAATTCTTAGGTAATA

>Glyma.14g159800.3 sequence-type=transcript locus=Glyma.14g159800 ID=Glyma.14g159800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CATCTTTGGGTTGGGTTATCTGAAGCTTCTCCTGCGGAGGAAACATAACAGCGCTTGTTTGGGAACCCTAGTTTGGCAAACATTTCAAGAATCAGAGTCTTTTACCACTCTCAGGTTTAGCATTATTATCTGAAATGGCATCGGTGTCTAGTCAGCAACAGTTCCGTTACACGCAGCCACCGTCAAAGGTTCTTCATTTGAGAAATTTGCCGTGGGAGTGTACAGAGGAGGAACTAATTGAGCTTGGGAAGCCATTTGGGAAAGTTGTGAACACAAAGTGCAACGTTGGAGCAAATCGTAATCAAGCTTTTATTGAATTTGCAGATTTAAATCAGGCGATTGCAATGATATCGTATTATGCCTCATCGTCGGAGCCTGCTCAAGTACGAGGGAAAACTGTGTATCTACAATATTCCAATAGGCAAGAAATAGTGAATAACAAAACTGCAGCAGATGTTGCTGGAAATGTACTGTTAGTTACAATTGAGGGTGAAGATGCACGCCTTGTCAGCATTGATGTCTTACACTTGGTCTTTTCAGCCTTTGGGTTTGTGCATAAGATTACTACTTTTGAGAAGACAGCAGGATTCCAGGCATTGGTGCAATTCTCAGATGCAGAAACTGCTACTTCTGCAAAGGATGCTTTGGATGGAAGAAGCATACCTAGGTACCTGCTTCCTGAACATATGGGACCATGTAGCCTTAAGATCACATATTCTGGACATTCAGACTTAAGTGTCAAGTTTCAAAGTCACAGAAGCAGAGACTACACTAATCCTTACCTCCCTGTTGCTCAATCTGCCATGGAGGGAAGTGGACAGCCCATGGTGGGTTTGGATGGAAAGAGGCTGGAGGCCGAGAGTAATGTTCTTCTTGCATCTATTGAGAACATGCAGTATGCTGTAACCTTGGATGTCTTACACATGGTTTTCTCTGCCTTTGGACCTGTCCAAAAGATTGCAATGTTTGACAAGAATGGTGGTTTACAGGCTCTGATTCAATATCCAGATATCCAAACAGCTGTTGTGGCCAAGGAAGCCTTGGAAGGACACTGCATATATGATGGAGGTTTTTGCAAGCTTCACATCTCGTATTCGCGTCATTCTGATCTTAGTATAAAGGTAACCGATCTACAATGTATAAATGAGGATTCATGTCATGAGTAATGTTTGTAAGAGTTCAGTGTAATGATGAAAACCAGAAAGGTAAAGTGAACAAATCTTGTGCAACTATGATCAAATAATGGTCCATCCGTTATACAAGCATATCTAGACCTATTTGTTTTGGGATATACAGTTTACTGACCATGAGATTCTAGTTTTGGACCTATGGTTTTCAGGTTGAAGTAAGCATGTAGCTGTGTCAATATATGCTGAAAAGACTTCCACTGGATCTTTCCCGATTTCCCTTATTATTATTTGTTGTGGAATTTCTTGAATGCATTAATGTCAAGTATCCTGTCCCAAATAATAAATTCATATTTTCTGTTCATTATGCTTGGCAGGCGAGGGGAATTCCCTATTCAATTGTTATTGAATATTATGAAATCTTTTTCCAAGCTGTCAGCTAGTATGAGTCCATTTATTGTTATTTAACTTTTAAAGAAATGCACTTCTGTTATGTGTTTGGAGGTTCAAATGTTTTGGGATTTGTGTGATTACAGGTGAATAATGATAGAAGTAGAGACTATACTATTCCTAATGTACCACCACCTGTAGTGAATGCTCAGCCCTCAATTTTAGGGCAACATCCAGTTCCCATGACGGGTCCTCCTCCTCAACAGTACAATGGAGCTCAATACGCATCAGTTACTGAGCAGACTCTGATGCCTCAATCTCAGGCTGGATGGGGGACAGCTCCATCTCAGTCTATGCTGCAGATGCATAACAATCCTTACACGCCATCTGCTATGGTGCCACCGCAAACAGCCCCTGGAATGCAGTTTCCAAGTCACATTCAATAGCATCATGCATCTCATGTCTCTTACACAAAGTGGCGAACATAGTCAGCGCATCTGCAGAAGTGAGGACTACCATTTAAATTGTGGCTTTTCCTATGTGAGGAAACTGGCGTTTGCCAATGTGATTCCAAAATTCTCTCTCCCTTTGTTTATTATTAGATGAGATGAGATTTTGATTGTAAGCAATTGGCCAAGAACTTTTGGTTGGCTGGCAACACAGGAAAAAACTACACATTCTATTTTTCGTTTATTTTGACTTGGTTTGGCATTTGTTTTTCAGATATTGCTTTAAAAAAGTTAACAAGGCAATGAAATAAAAGTTGTTAATGGAATTCTTAGGTAATA
Coding sequences of Glyma.14g159800
>Glyma.14g159800.1 sequence-type=CDS polypeptide=Glyma.14g159800.1.p locus=Glyma.14g159800 ID=Glyma.14g159800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCATCGGTGTCTAGTCAGCAACAGTTCCGTTACACGCAGCCACCGTCAAAGGTTCTTCATTTGAGAAATTTGCCGTGGGAGTGTACAGAGGAGGAACTAATTGAGCTTGGGAAGCCATTTGGGAAAGTTGTGAACACAAAGTGCAACGTTGGAGCAAATCGTAATCAAGCTTTTATTGAATTTGCAGATTTAAATCAGGCGATTGCAATGATATCGTATTATGCCTCATCGTCGGAGCCTGCTCAAGTACGAGGGAAAACTGTGTATCTACAATATTCCAATAGGCAAGAAATAGTGAATAACAAAACTGCAGCAGATGTTGCTGGAAATGTACTGTTAGTTACAATTGAGGGTGAAGATGCACGCCTTGTCAGCATTGATGTCTTACACTTGGTCTTTTCAGCCTTTGGGTTTGTGCATAAGATTACTACTTTTGAGAAGACAGCAGGATTCCAGGCATTGGTGCAATTCTCAGATGCAGAAACTGCTACTTCTGCAAAGGATGCTTTGGATGGAAGAAGCATACCTAGGTACCTGCTTCCTGAACATATGGGACCATGTAGCCTTAAGATCACATATTCTGGACATTCAGACTTAAGTGTCAAGTTTCAAAGTCACAGAAGCAGAGACTACACTAATCCTTACCTCCCTGTTGCTCAATCTGCCATGGAGGGAAGTGGACAGCCCATGGTGGGTTTGGATGGAAAGAGGCTGGAGGCCGAGAGTAATGTTCTTCTTGCATCTATTGAGAACATGCAGTATGCTGTAACCTTGGATGTCTTACACATGGTTTTCTCTGCCTTTGGACCTGTCCAAAAGATTGCAATGTTTGACAAGAATGGTGGTTTACAGGCTCTGATTCAATATCCAGATATCCAAACAGCTGTTGTGGCCAAGGAAGCCTTGGAAGGACACTGCATATATGATGGAGGTTTTTGCAAGCTTCACATCTCGTATTCGCGTCATTCTGATCTTAGTATAAAGGTGAATAATGATAGAAGTAGAGACTATACTATTCCTAATGTACCACCACCTGTAGTGAATGCTCAGCCCTCAATTTTAGGGCAACATCCAGTTCCCATGACGGGTCCTCCTCCTCAACAGTACAATGGAGCTCAATACGCATCAGTTACTGAGCAGACTCTGATGCCTCAATCTCAGGCTGGATGGGGGACAGCTCCATCTCAGTCTATGCTGCAGATGCATAACAATCCTTACACGCCATCTGCTATGGTGCCACCGCAAACAGCCCCTGGAATGCAGTTTCCAAGTCACATTCAATAG

>Glyma.14g159800.2 sequence-type=CDS polypeptide=Glyma.14g159800.2.p locus=Glyma.14g159800 ID=Glyma.14g159800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCATCGGTGTCTAGTCAGCAACAGTTCCGTTACACGCAGCCACCGTCAAAGGTTCTTCATTTGAGAAATTTGCCGTGGGAGTGTACAGAGGAGGAACTAATTGAGCTTGGGAAGCCATTTGGGAAAGTTGTGAACACAAAGTGCAACGTTGGAGCAAATCGTAATCAAGCTTTTATTGAATTTGCAGATTTAAATCAGGCGATTGCAATGATATCGTATTATGCCTCATCGTCGGAGCCTGCTCAAGTACGAGGGAAAACTGTGTATCTACAATATTCCAATAGGCAAGAAATAGTGAATAACAAAACTGCAGCAGATGTTGCTGGAAATGTACTGTTAGTTACAATTGAGGGTGAAGATGCACGCCTTGTCAGCATTGATGTCTTACACTTGGTCTTTTCAGCCTTTGGGTTTGTGCATAAGATTACTACTTTTGAGAAGACAGCAGGATTCCAGGCATTGGTGCAATTCTCAGATGCAGAAACTGCTACTTCTGCAAAGGATGCTTTGGATGGAAGAAGCATACCTAGGTACCTGCTTCCTGAACATATGGGACCATGTAGCCTTAAGATCACATATTCTGGACATTCAGACTTAAGTGTCAAGTTTCAAAGTCACAGAAGCAGAGACTACACTAATCCTTACCTCCCTGTTGCTCAATCTGCCATGGAGGGAAGTGGACAGCCCATGGTGGGTTTGGATGGAAAGAGGCTGGAGGCCGAGAGTAATGTTCTTCTTGCATCTATTGAGAACATGCAGTATGCTGTAACCTTGGATGTCTTACACATGGTTTTCTCTGCCTTTGGACCTGTCCAAAAGATTGCAATGTTTGACAAGAATGGTGGTTTACAGGCTCTGATTCAATATCCAGATATCCAAACAGCTGTTGTGGCCAAGGAAGCCTTGGAAGGACACTGCATATATGATGGAGGTTTTTGCAAGCTTCACATCTCGTATTCGCGTCATTCTGATCTTAGTATAAAGGTGAATAATGATAGAAGTAGAGACTATACTATTCCTAATGTACCACCACCTGTAGTGAATGCTCAGCCCTCAATTTTAGGGCAACATCCAGTTCCCATGACGGGTCCTCCTCCTCAACAGTACAATGGAGCTCAATACGCATCAGTTACTGAGCAGACTCTGATGCCTCAATCTCAGGCTGGATGGGGGACAGCTCCATCTCAGTCTATGCTGCAGATGCATAACAATCCTTACACGCCATCTGCTATGGTGCCACCGCAAACAGCCCCTGGAATGCAGTTTCCAAGTCACATTCAATAG

>Glyma.14g159800.3 sequence-type=CDS polypeptide=Glyma.14g159800.3.p locus=Glyma.14g159800 ID=Glyma.14g159800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCATCGGTGTCTAGTCAGCAACAGTTCCGTTACACGCAGCCACCGTCAAAGGTTCTTCATTTGAGAAATTTGCCGTGGGAGTGTACAGAGGAGGAACTAATTGAGCTTGGGAAGCCATTTGGGAAAGTTGTGAACACAAAGTGCAACGTTGGAGCAAATCGTAATCAAGCTTTTATTGAATTTGCAGATTTAAATCAGGCGATTGCAATGATATCGTATTATGCCTCATCGTCGGAGCCTGCTCAAGTACGAGGGAAAACTGTGTATCTACAATATTCCAATAGGCAAGAAATAGTGAATAACAAAACTGCAGCAGATGTTGCTGGAAATGTACTGTTAGTTACAATTGAGGGTGAAGATGCACGCCTTGTCAGCATTGATGTCTTACACTTGGTCTTTTCAGCCTTTGGGTTTGTGCATAAGATTACTACTTTTGAGAAGACAGCAGGATTCCAGGCATTGGTGCAATTCTCAGATGCAGAAACTGCTACTTCTGCAAAGGATGCTTTGGATGGAAGAAGCATACCTAGGTACCTGCTTCCTGAACATATGGGACCATGTAGCCTTAAGATCACATATTCTGGACATTCAGACTTAAGTGTCAAGTTTCAAAGTCACAGAAGCAGAGACTACACTAATCCTTACCTCCCTGTTGCTCAATCTGCCATGGAGGGAAGTGGACAGCCCATGGTGGGTTTGGATGGAAAGAGGCTGGAGGCCGAGAGTAATGTTCTTCTTGCATCTATTGAGAACATGCAGTATGCTGTAACCTTGGATGTCTTACACATGGTTTTCTCTGCCTTTGGACCTGTCCAAAAGATTGCAATGTTTGACAAGAATGGTGGTTTACAGGCTCTGATTCAATATCCAGATATCCAAACAGCTGTTGTGGCCAAGGAAGCCTTGGAAGGACACTGCATATATGATGGAGGTTTTTGCAAGCTTCACATCTCGTATTCGCGTCATTCTGATCTTAGTATAAAGGTAACCGATCTACAATGTATAAATGAGGATTCATGTCATGAGTAA
Predicted protein sequences of Glyma.14g159800
>Glyma.14g159800.1.p sequence-type=predicted peptide transcript=Glyma.14g159800.1 locus=Glyma.14g159800 ID=Glyma.14g159800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASVSSQQQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVAGNVLLVTIEGEDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPEHMGPCSLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQPMVGLDGKRLEAESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALEGHCIYDGGFCKLHISYSRHSDLSIKVNNDRSRDYTIPNVPPPVVNAQPSILGQHPVPMTGPPPQQYNGAQYASVTEQTLMPQSQAGWGTAPSQSMLQMHNNPYTPSAMVPPQTAPGMQFPSHIQ*

>Glyma.14g159800.2.p sequence-type=predicted peptide transcript=Glyma.14g159800.2 locus=Glyma.14g159800 ID=Glyma.14g159800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASVSSQQQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVAGNVLLVTIEGEDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPEHMGPCSLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQPMVGLDGKRLEAESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALEGHCIYDGGFCKLHISYSRHSDLSIKVNNDRSRDYTIPNVPPPVVNAQPSILGQHPVPMTGPPPQQYNGAQYASVTEQTLMPQSQAGWGTAPSQSMLQMHNNPYTPSAMVPPQTAPGMQFPSHIQ*

>Glyma.14g159800.3.p sequence-type=predicted peptide transcript=Glyma.14g159800.3 locus=Glyma.14g159800 ID=Glyma.14g159800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASVSSQQQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVAGNVLLVTIEGEDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYLLPEHMGPCSLKITYSGHSDLSVKFQSHRSRDYTNPYLPVAQSAMEGSGQPMVGLDGKRLEAESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGLQALIQYPDIQTAVVAKEALEGHCIYDGGFCKLHISYSRHSDLSIKVTDLQCINEDSCHE*






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