Glyma.14g152900

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Report for Sequence Feature Glyma.14g152900

Feature Type:	gene_model
Chromosome:	Gm14
Start:	33236399
stop:	33242783
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.14g152900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G21720.1	AT	proteasome beta subunit C1	JGI	N/A	IEA
GO:0006508	GO-bp	proteolysis	EnsemblGenomes	N/A	IEA
GO:0043161	GO-bp	proteasome-mediated ubiquitin-dependent protein catabolic process	EnsemblGenomes	N/A	IEA
GO:0051603	GO-bp	proteolysis involved in cellular protein catabolic process	EnsemblGenomes	N/A	IEA
GO:0051603	GO-bp	proteolysis involved in cellular protein catabolic process	JGI	N/A	IEA
GO:0000502	GO-cc	proteasome complex	EnsemblGenomes	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0005839	GO-cc	proteasome core complex	EnsemblGenomes	N/A	IEA
GO:0005839	GO-cc	proteasome core complex	JGI	N/A	IEA
GO:0019774	GO-cc	proteasome core complex, beta-subunit complex	EnsemblGenomes	N/A	IEA
GO:0004175	GO-mf	endopeptidase activity	EnsemblGenomes	N/A	IEA
GO:0004298	GO-mf	threonine-type endopeptidase activity	EnsemblGenomes	N/A	IEA
GO:0004298	GO-mf	threonine-type endopeptidase activity	JGI	N/A	IEA
GO:0008233	GO-mf	peptidase activity	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
KOG0180	KOG	20S proteasome, regulatory subunit beta type PSMB3/PUP3	JGI	N/A	IEA
PTHR11599	Panther	PROTEASOME SUBUNIT ALPHA/BETA	JGI	N/A	IEA
PTHR11599:SF7	Panther		JGI	N/A	IEA
PF00227	PFAM	Proteasome subunit	JGI	N/A	IEA

Expression Patterns of Glyma.14g152900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g152900 not represented in the dataset	Glyma.14g152900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.14g152900

Paralog	Evidence	Comments
Glyma.13g031200	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g152900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma14g24270	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.14g152900

Limit To All Plant Sequences

>Glyma.14g152900.2 sequence-type=transcript locus=Glyma.14g152900 ID=Glyma.14g152900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACTAAGACGACAAGGACAACATTATTTGACGACTTAACCCCAAACAAAGGCTCTGCAATTGCAAATTCAGAGGATGTCGATCTTCGAGTACAACGGAAGCGCCGTGGTGGCTATGGTCGGCAAGAACTGCTTCGCCATTGCCAGCGACCGAAGGCTCGGCGTTCAGCTCCAAACTATAGCCACGGATTTTCAACGCATTTCCAAGATTCACGACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGTTTAGTCTCTGCTCTGCTCTATGAGAAAAGGTTTGGTCCATATTTTTGCCAGCCTGTAATTGCTGGATTAGGGGATGAAGACAAACCATTCATTTGCACAATGGATTGTATTGGCGCAAAGGAGCTTGCAAAAGATTTTGTTGTTTCTGGCACTGCATCTGAGTCTCTGTATGGTGCTTGTGAGGCAATGTTTAAGCCTGACATGGAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATTATAAGCCACCTGGGATTTCTGTTTAGCTTGGAGCTGAATGTCATGACATTTACCCTCCTTTGTTTTAAAGGATTATCAGTGAAAAGGAGATACTTGAGTTGGGCATGTTGTGAATTTGAGTGGCCTATTGGAATGTTTTTCAGTGCAGACTGGCATGCAAAGCACGAGAATGATACAAGAATTGCCTCAAATCTATTTCTCCCGTTTTTTTCTTCCTTTCTTCTGGTGTTCTTGTATAAATGATTATTTGCTTTCAAAAA

>Glyma.14g152900.3 sequence-type=transcript locus=Glyma.14g152900 ID=Glyma.14g152900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACTAAGACGACAAGGACAACATTATTTGACGACTTAACCCCAAACAAAGGCTCTGCAATTGCAAATTCAGAGGATGTCGATCTTCGAGTACAACGGAAGCGCCGTGGTGGCTATGGTCGGCAAGAACTGCTTCGCCATTGCCAGCGACCGAAGGCTCGGCGTTCAGCTCCAAACTATAGCCACGGATTTTCAACGCATTTCCAAGATTCACGACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGTTTAGTCTCTGCTCTGCTCTATGAGAAAAGGTTTGGTCCATATTTTTGCCAGCCTGTAATTGCTGGATTAGGGGATGAAGACAAACCATTCATTTGCACAATGGATTGTATTGGCGCAAAGGAGCTTGCAAAAGATTTTGTTGTTTCTGGCACTGCATCTGAGTCTCTGTATGGTGCTTGTGAGGCAATGTTTAAGCCTGACATGGAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGAATTATAAGCCACCTGGGATTTCTGTTTAGCTTGGAGCTGAATGTCATGACATTTACCCTCCTTTGTTTTAAAGGGTACCTTGTTATTGTGGCTCTTTAGATAAAATGTACCCTGAAATTTATATATTGACGGTTTCACTTGTTCTATATTTAGATTATCAGTGAAAAGGAGATACTTGAGTTGGGCATGTTGTGAATTTGAGTGGCCTATTGGAATGTTTTTCAGTGCAGACTGGCATGCAAAGCACGAGAATGATACAAGAATTGCCTCAAATCTATTTCTCCCGTTTTTTTCTTCCTTTCTTCTGGTGTTCTTGTATAAATGATTATTTGCTTTCAAAAA

>Glyma.14g152900.4 sequence-type=transcript locus=Glyma.14g152900 ID=Glyma.14g152900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACTAAGACGACAAGGACAACATTATTTGACGACTTAACCCCAAACAAAGGCTCTGCAATTGCAAATTCAGAGGATGTCGATCTTCGAGTACAACGGAAGCGCCGTGGTGGCTATGGTCGGCAAGAACTGCTTCGCCATTGCCAGCGACCGAAGGCTCGGCGTTCAGCTCCAAACTATAGCCACGGATTTTCAACGCATTTCCAAGATTCACGACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGTTTAGTCTCTGCTCTGCTCTATGAGAAAAGGTTTGGTCCATATTTTTGCCAGCCTGTAATTGCTGGATTAGGGGATGAAGACAAACCATTCATTTGCACAATGGATTGTATTGGCGCAAAGGAGCTTGCAAAAGATTTTGTTGTTTCTGGCACTGCATCTGAGTCTCTGTATGGTGCTTGTGAGGCAATGTTTAAGCCTGACATGGAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTGTAAGCTTACAAATTCTGATTCTCTTAGCAGTTTGATCTTTAGATTTTTAGATGCTGCTGTTGTCAATTTCCCATCTGAGTACTTGTACAAGCCACTGGCCAGACCGGAAGTTCTGACTTTTGCATCTATTAAAAAT

Coding sequences of Glyma.14g152900

Limit To All Plant Sequences

>Glyma.14g152900.1 sequence-type=CDS polypeptide=Glyma.14g152900.1.p locus=Glyma.14g152900 ID=Glyma.14g152900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGATCTTCGAGTACAACGGAAGCGCCGTGGTGGCTATGGTCGGCAAGAACTGCTTCGCCATTGCCAGCGACCGAAGGCTCGGCGTTCAGCTCCAAACTATAGCCACGGATTTTCAACGCATTTCCAAGATTCACGACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGTTTAGTCTCTGCTCTGCTCTATGAGAAAAGGTTTGGTCCATATTTTTGCCAGCCTGTAATTGCTGGATTAGGGGATGAAGACAAACCATTCATTTGCACAATGGATTGTATTGGCGCAAAGGAGCTTGCAAAAGATTTTGTTGTTTCTGGCACTGCATCTGAGTCTCTGTATGGTGCTTGTGAGGCAATGTTTAAGCCTGACATGGAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGA

>Glyma.14g152900.2 sequence-type=CDS polypeptide=Glyma.14g152900.2.p locus=Glyma.14g152900 ID=Glyma.14g152900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGATCTTCGAGTACAACGGAAGCGCCGTGGTGGCTATGGTCGGCAAGAACTGCTTCGCCATTGCCAGCGACCGAAGGCTCGGCGTTCAGCTCCAAACTATAGCCACGGATTTTCAACGCATTTCCAAGATTCACGACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGTTTAGTCTCTGCTCTGCTCTATGAGAAAAGGTTTGGTCCATATTTTTGCCAGCCTGTAATTGCTGGATTAGGGGATGAAGACAAACCATTCATTTGCACAATGGATTGTATTGGCGCAAAGGAGCTTGCAAAAGATTTTGTTGTTTCTGGCACTGCATCTGAGTCTCTGTATGGTGCTTGTGAGGCAATGTTTAAGCCTGACATGGAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTCACGCCAAATGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTGA

>Glyma.14g152900.3 sequence-type=CDS polypeptide=Glyma.14g152900.3.p locus=Glyma.14g152900 ID=Glyma.14g152900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGATCTTCGAGTACAACGGAAGCGCCGTGGTGGCTATGGTCGGCAAGAACTGCTTCGCCATTGCCAGCGACCGAAGGCTCGGCGTTCAGCTCCAAACTATAGCCACGGATTTTCAACGCATTTCCAAGATTCACGACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGTTTAGTCTCTGCTCTGCTCTATGAGAAAAGGTTTGGTCCATATTTTTGCCAGCCTGTAATTGCTGGATTAGGGGATGAAGACAAACCATTCATTTGCACAATGGATTGTATTGGCGCAAAGGAGCTTGCAAAAGATTTTGTTGTTTCTGGCACTGCATCTGAGTCTCTGTATGGTGCTTGTGAGGCAATGTTTAAGCCTGACATGGAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTCACGCCAAATGA

>Glyma.14g152900.4 sequence-type=CDS polypeptide=Glyma.14g152900.4.p locus=Glyma.14g152900 ID=Glyma.14g152900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGATCTTCGAGTACAACGGAAGCGCCGTGGTGGCTATGGTCGGCAAGAACTGCTTCGCCATTGCCAGCGACCGAAGGCTCGGCGTTCAGCTCCAAACTATAGCCACGGATTTTCAACGCATTTCCAAGATTCACGACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTGTATCAGCGTCTTGTTTTCCGGCACAAACTGTACCAGCTGCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGTTTAGTCTCTGCTCTGCTCTATGAGAAAAGGTTTGGTCCATATTTTTGCCAGCCTGTAATTGCTGGATTAGGGGATGAAGACAAACCATTCATTTGCACAATGGATTGTATTGGCGCAAAGGAGCTTGCAAAAGATTTTGTTGTTTCTGGCACTGCATCTGAGTCTCTGTATGGTGCTTGTGAGGCAATGTTTAAGCCTGACATGGAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTGTAA

Predicted protein sequences of Glyma.14g152900

Limit To All Plant Sequences

>Glyma.14g152900.1.p sequence-type=predicted peptide transcript=Glyma.14g152900.1 locus=Glyma.14g152900 ID=Glyma.14g152900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPNEVKERILKGRMD*

>Glyma.14g152900.2.p sequence-type=predicted peptide transcript=Glyma.14g152900.2 locus=Glyma.14g152900 ID=Glyma.14g152900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPNEVKERILKGRMD*

>Glyma.14g152900.3.p sequence-type=predicted peptide transcript=Glyma.14g152900.3 locus=Glyma.14g152900 ID=Glyma.14g152900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVHAK*

>Glyma.14g152900.4.p sequence-type=predicted peptide transcript=Glyma.14g152900.4 locus=Glyma.14g152900 ID=Glyma.14g152900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVV*

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