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Report for Sequence Feature Glyma.14g127200

Feature Type:gene_model
Chromosome:Gm14
Start:20383233
stop:20386115
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g127200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G11330.2AT FAD/NAD(P)-binding oxidoreductase family protein JGI N/AIEA
GO:0044550GO-bp secondary metabolite biosynthetic process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0004497GO-mf monooxygenase activity EnsemblGenomesN/AIEA
PTHR13789Panther MONOOXYGENASE JGI N/AIEA
PTHR13789:SF8Panther JGI N/AIEA
GN7V-64768SoyCyc9-rxn 6-hydroxynicotinate 3-monooxygenase Plant Metabolic Network ISS

Expression Patterns of Glyma.14g127200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g127200 not represented in the dataset
Glyma.14g127200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.14g127200
ParalogEvidenceComments
Glyma.17g206700 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g127200 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g15291 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g127200
>Glyma.14g127200.1 sequence-type=CDS polypeptide=Glyma.14g127200.1.p locus=Glyma.14g127200 ID=Glyma.14g127200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTGGGGAAGGAAAGCCAAGGGCAGTGATTGTTGGTGGTAGCATAGCTGCTGGTTGGAATGTCACTGTGCTTGAGAAAACCAATGCACCTCATAGGGGAAGTCCAACTGGTGCAGGTCTTGGACTTGACCCTCTTTCTCAAAGAATCAGACCACAACTCTTCCACAACATCACTGTACCGCTAACTATAGATCAGAACCAGGCAATTGATAATGAGAAGAAGGTCAGTTGGACATTGGCAAGAGATGAGAGTTTCAACTTCAGAGCAGTACATTGGTCTGATCTTCATGGTCTTCTATACAATGCACTGCCATCAAATGTATTTTTATGGGGTCATCTTTTTCTCTCTTTCCATGTTGCACATGACAAGGGTTCTGTCATAGTAAAGGCTAAGGTTCTAGAAACTGGCAAGGTTATAGAGATAGTAGGGGATTTGCTTGTTGCAGCAGATGGTTGTCTCTCTTCCATCCGCCAGAAATATCTCCCTGATTTTAAACTCAGATATTTGGGCTATTGTGCATGGAGAGGGGTCTTTGAATTATCAGAAGCTGAGGCTTTAGAAACCATCAAGGTCATAAAAAAGGCATACCCTGATTTAGGAAAATGCTTGTACTCCGACTTGGGCTCATGTACACACAGTGGTTTCTATGAGCTTCTAAACAAAAAGATCAATTGGATTTGGTATGTGAATCAGCCACAGCCTGAAGTCAAGCTCGAAGTAGATGAGATTTCAACTGCCTTAAGGCTTCATCCCTCTCGATAA
Predicted protein sequences of Glyma.14g127200
>Glyma.14g127200.1.p sequence-type=predicted peptide transcript=Glyma.14g127200.1 locus=Glyma.14g127200 ID=Glyma.14g127200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVGEGKPRAVIVGGSIAAGWNVTVLEKTNAPHRGSPTGAGLGLDPLSQRIRPQLFHNITVPLTIDQNQAIDNEKKVSWTLARDESFNFRAVHWSDLHGLLYNALPSNVFLWGHLFLSFHVAHDKGSVIVKAKVLETGKVIEIVGDLLVAADGCLSSIRQKYLPDFKLRYLGYCAWRGVFELSEAEALETIKVIKKAYPDLGKCLYSDLGSCTHSGFYELLNKKINWIWYVNQPQPEVKLEVDEISTALRLHPSR*






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