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Report for Sequence Feature Glyma.14g125300

Feature Type:gene_model
Chromosome:Gm14
Start:19876860
stop:19887327
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g125300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G35690.1AT acyl-CoA oxidase 5 JGI N/AIEA
AT4G16760.1AT acyl-CoA oxidase 1 JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0033539GO-bp fatty acid beta-oxidation using acyl-CoA dehydrogenase EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0003995GO-mf acyl-CoA dehydrogenase activity EnsemblGenomesN/AIEA
GO:0003995GO-mf acyl-CoA dehydrogenase activity JGI N/AIEA
GO:0016627GO-mf oxidoreductase activity, acting on the CH-CH group of donors EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding EnsemblGenomesN/AIEA
PTHR10909Panther ELECTRON TRANSPORT OXIDOREDUCTASE JGI N/AIEA
PTHR10909:SF11Panther PEROXISOMAL ACYL-COENZYME A OXIDASE 3 JGI N/AIEA
PF02770PFAM Acyl-CoA dehydrogenase, middle domain JGI N/AIEA
PWY-735SoyCyc9 jasmonic acid biosynthesis Plant Metabolic Network ISS
GN7V-61471SoyCyc9-rxn acyl-CoA oxidase Plant Metabolic Network ISS

Expression Patterns of Glyma.14g125300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.14g125300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g14990 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.14g125300
>Glyma.14g125300.2 sequence-type=transcript locus=Glyma.14g125300 ID=Glyma.14g125300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATATTTTTGGTAGCATTGCTTTGTGTACTAAATTTTAGTTGTTTATATTCTTTTGCAGGGAATGTTTGTGCCTGCTATCCAAGGACAAGGCACTGACGAACAGCAGCAGAAGTGGTTGCCTCTAGCTTATAGGATGCAAATAATTGGTTGCTATGCCCAAACTGAACTGGGTCATGGGTCCAATGTTCAAGGGCTAGAAACAACTGCAACGTTTGATCCCAAAACAGACGAATTTGTTATCCATAGCCCCACATTGACTTCCAGCAAATGGTGGCCTGGTGGATTGGGTAAAATATCCACCCATGCTGTTGCTTATGCCCGTCTAATTATTGGTGGTGAAGACCATGGAGTGCATGGTTTCATCGTCCAGCTGCGGAGCTTGGATGATCACTTGCCTCTTCCAGGCATAACTATTGGTGATATTGGGATGAAATTTGGAAATGCAGCATATAACACCATGGACAATGGAGTTCTAAGATTTGACCATGTACGAATTCCAAGGAATCAAATGTTAATGAGGGTTTCACAGGTTACCAGAGAAGGAAAATATGTACGCTCAAATGTTCCAAGACAATTAGTTTATGGTACTATGGTAAATGTGAGACAGAAAATCGTAGCTGATGCATCAGTTGCTTTGTCTCGAGCAGTTTGCATTGCTACAAGATATAGTGCTGTTAGAAGACAGTTTGGATCACATAATGGAGGTCTAGAAACACAGGTGATTGATTACAAAACACAGCAGGCTAGGCTCTTCCCTTTGCTGGCTTCTGCTTATGCTTTCAGATTTGTGGGTGGGTGGCTGAAATGGCTTTATATGGATGTGACGGAAAGATTGCAAGCTAATGATTTTTCAACATTGCCTGAGGCTCATGCATGCACTGCTGGATTGAAATCCTTGACTACTACGGCAACTGCTGATGGAATTGAAGAATGCCGTAAACTATGTGGTGGTCATGGTTACCTTTGTAGCAGTGGTCTCCCTGAGTTATTTGCTGTTTATGTTCCTGCCTGCACGTATGAAGGAGACAATATTGTGCTTCTTTTACAGGTGGCAAGGCATCTCGTGAAGACTGTTTCTCAGCTGGACTCTGGAAATAAGCCTGTTGGTACTACAGCTTATATGGCTCGAGTGGAACAACTGATGCAATATCACTCTAATGTTGAAAAGGCTGAGGATTGGTTGAAGCCTAATGTAGTGTTAGAAGCATTTGAAGCTAGGGCTGCTAGGATGTCAGTTGCTTGTGCTCAAAATCTTAGCAAGTTTGCTAACCCTGAACAG
Coding sequences of Glyma.14g125300
>Glyma.14g125300.1 sequence-type=CDS polypeptide=Glyma.14g125300.1.p locus=Glyma.14g125300 ID=Glyma.14g125300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCGTTCAGAAAGGATGATAGAGCCACACTTGATAGGAAGGAGTTGTTTAAAAACACCTTGAGAAAAGCAGCTTATGCATGGAAAAGGATCAACGAGCTCCGTCTTAATGAACAGGAAGCTTATAAGCTCAGATCTTTTGTGGATCAAGCTGCATTTACAGATCTTCATTGGGGAATGTTTGTGCCTGCTATCCAAGGACAAGGCACTGACGAACAGCAGCAGAAGTGGTTGCCTCTAGCTTATAGGATGCAAATAATTGGTTGCTATGCCCAAACTGAACTGGGTCATGGGTCCAATGTTCAAGGGCTAGAAACAACTGCAACGTTTGATCCCAAAACAGACGAATTTGTTATCCATAGCCCCACATTGACTTCCAGCAAATGGTGGCCTGGTGGATTGGGTAAAATATCCACCCATGCTGTTGCTTATGCCCGTCTAATTATTGGTGGTGAAGACCATGGAGTGCATGGTTTCATCGTCCAGCTGCGGAGCTTGGATGATCACTTGCCTCTTCCAGGCATAACTATTGGTGATATTGGGATGAAATTTGGAAATGCAGCATATAACACCATGGACAATGGAGTTCTAAGATTTGACCATGTACGAATTCCAAGGAATCAAATGTTAATGAGGGTTTCACAGGTTACCAGAGAAGGAAAATATGTACGCTCAAATGTTCCAAGACAATTAGTTTATGGTACTATGGTAAATGTGAGACAGAAAATCGTAGCTGATGCATCAGTTGCTTTGTCTCGAGCAGTTTGCATTGCTACAAGATATAGTGCTGTTAGAAGACAGTTTGGATCACATAATGGAGGTCTAGAAACACAGGTGATTGATTACAAAACACAGCAGGCTAGGCTCTTCCCTTTGCTGGCTTCTGCTTATGCTTTCAGATTTGTGGGTGGGTGGCTGAAATGGCTTTATATGGATGTGACGGAAAGATTGCAAGCTAATGATTTTTCAACATTGCCTGAGGCTCATGCATGCACTGCTGGATTGAAATCCTTGACTACTACGGCAACTGCTGATGGAATTGAAGAATGCCGTAAACTATGTGGTGGTCATGGTTACCTTTGTAGCAGTGGTCTCCCTGAGTTATTTGCTGTTTATGTTCCTGCCTGCACGTATGAAGGAGACAATATTGTGCTTCTTTTACAGGTGGCAAGGCATCTCGTGAAGACTGTTTCTCAGCTGGACTCTGGAAATAAGCCTGTTGGTACTACAGCTTATATGGCTCGAGTGGAACAACTGATGCAATATCACTCTAATGTTGAAAAGGCTGAGGATTGGTTGAAGCCTAATGTAGTGTTAGAAGCATTTGAAGCTAGGGCTGCTAGGATGTCAGTTGCTTGTGCTCAAAATCTTAGCAAGTTTGCTAACCCTGAACAG

>Glyma.14g125300.2 sequence-type=CDS polypeptide=Glyma.14g125300.2.p locus=Glyma.14g125300 ID=Glyma.14g125300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTGTGCCTGCTATCCAAGGACAAGGCACTGACGAACAGCAGCAGAAGTGGTTGCCTCTAGCTTATAGGATGCAAATAATTGGTTGCTATGCCCAAACTGAACTGGGTCATGGGTCCAATGTTCAAGGGCTAGAAACAACTGCAACGTTTGATCCCAAAACAGACGAATTTGTTATCCATAGCCCCACATTGACTTCCAGCAAATGGTGGCCTGGTGGATTGGGTAAAATATCCACCCATGCTGTTGCTTATGCCCGTCTAATTATTGGTGGTGAAGACCATGGAGTGCATGGTTTCATCGTCCAGCTGCGGAGCTTGGATGATCACTTGCCTCTTCCAGGCATAACTATTGGTGATATTGGGATGAAATTTGGAAATGCAGCATATAACACCATGGACAATGGAGTTCTAAGATTTGACCATGTACGAATTCCAAGGAATCAAATGTTAATGAGGGTTTCACAGGTTACCAGAGAAGGAAAATATGTACGCTCAAATGTTCCAAGACAATTAGTTTATGGTACTATGGTAAATGTGAGACAGAAAATCGTAGCTGATGCATCAGTTGCTTTGTCTCGAGCAGTTTGCATTGCTACAAGATATAGTGCTGTTAGAAGACAGTTTGGATCACATAATGGAGGTCTAGAAACACAGGTGATTGATTACAAAACACAGCAGGCTAGGCTCTTCCCTTTGCTGGCTTCTGCTTATGCTTTCAGATTTGTGGGTGGGTGGCTGAAATGGCTTTATATGGATGTGACGGAAAGATTGCAAGCTAATGATTTTTCAACATTGCCTGAGGCTCATGCATGCACTGCTGGATTGAAATCCTTGACTACTACGGCAACTGCTGATGGAATTGAAGAATGCCGTAAACTATGTGGTGGTCATGGTTACCTTTGTAGCAGTGGTCTCCCTGAGTTATTTGCTGTTTATGTTCCTGCCTGCACGTATGAAGGAGACAATATTGTGCTTCTTTTACAGGTGGCAAGGCATCTCGTGAAGACTGTTTCTCAGCTGGACTCTGGAAATAAGCCTGTTGGTACTACAGCTTATATGGCTCGAGTGGAACAACTGATGCAATATCACTCTAATGTTGAAAAGGCTGAGGATTGGTTGAAGCCTAATGTAGTGTTAGAAGCATTTGAAGCTAGGGCTGCTAGGATGTCAGTTGCTTGTGCTCAAAATCTTAGCAAGTTTGCTAACCCTGAACAG
Predicted protein sequences of Glyma.14g125300
>Glyma.14g125300.1.p sequence-type=predicted peptide transcript=Glyma.14g125300.1 locus=Glyma.14g125300 ID=Glyma.14g125300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
AFRKDDRATLDRKELFKNTLRKAAYAWKRINELRLNEQEAYKLRSFVDQAAFTDLHWGMFVPAIQGQGTDEQQQKWLPLAYRMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKISTHAVAYARLIIGGEDHGVHGFIVQLRSLDDHLPLPGITIGDIGMKFGNAAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVRSNVPRQLVYGTMVNVRQKIVADASVALSRAVCIATRYSAVRRQFGSHNGGLETQVIDYKTQQARLFPLLASAYAFRFVGGWLKWLYMDVTERLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARHLVKTVSQLDSGNKPVGTTAYMARVEQLMQYHSNVEKAEDWLKPNVVLEAFEARAARMSVACAQNLSKFANPEQ

>Glyma.14g125300.2.p sequence-type=predicted peptide transcript=Glyma.14g125300.2 locus=Glyma.14g125300 ID=Glyma.14g125300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFVPAIQGQGTDEQQQKWLPLAYRMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKISTHAVAYARLIIGGEDHGVHGFIVQLRSLDDHLPLPGITIGDIGMKFGNAAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVRSNVPRQLVYGTMVNVRQKIVADASVALSRAVCIATRYSAVRRQFGSHNGGLETQVIDYKTQQARLFPLLASAYAFRFVGGWLKWLYMDVTERLQANDFSTLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNIVLLLQVARHLVKTVSQLDSGNKPVGTTAYMARVEQLMQYHSNVEKAEDWLKPNVVLEAFEARAARMSVACAQNLSKFANPEQ






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