Glyma.14g124300

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Report for Sequence Feature Glyma.14g124300

Feature Type:	gene_model
Chromosome:	Gm14
Start:	18984437
stop:	18988305
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.14g124300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G41700.3	AT	ubiquitin conjugating enzyme 8	JGI	N/A	IEA
AT5G53300.1	AT	ubiquitin-conjugating enzyme 10	JGI	N/A	IEA
GO:0000166	GO-mf	nucleotide binding	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	JGI	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0016740	GO-mf	transferase activity	EnsemblGenomes	N/A	IEA
GO:0016881	GO-mf	acid-amino acid ligase activity	JGI	N/A	IEA
KOG0417	KOG	Ubiquitin-protein ligase	JGI	N/A	IEA
KOG0426	KOG	Ubiquitin-protein ligase	JGI	N/A	IEA
PTHR24068	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PF00179	PFAM	Ubiquitin-conjugating enzyme	JGI	N/A	IEA

Expression Patterns of Glyma.14g124300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g124300 not represented in the dataset	Glyma.14g124300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.14g124300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma14g29120	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.14g124300

Limit To All Plant Sequences

>Glyma.14g124300.2 sequence-type=transcript locus=Glyma.14g124300 ID=Glyma.14g124300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTGGAACCAAtaaataataaataaataattacataaaataataacaataattaattattaattaattaattaTAGAAGAATAACCCAAACCCAATCAATCACAGAGAAGAAGATCGATTCCGAAGCCCCACATACCATTTGTTATTCATATAAAAACTCGTTTTCCTTCTCCATTTCTCGTCGCACCTTTTCctcttctctctctttctctctttctAGTTCGTGTTCTTCGTCGCAAATCCGAAGTAGGATCTCTCTTGTTTTTTCTCTAGGTTTTTCGCGATGGCGTCGAAGCGAATTTTGAAGGAGCTTAAGGATTTGCAGAAGGATCCTCCAACATCTTGCAGTGCCGGTCCTGTTCATGAAGATATGTTTCATTGGCAAGCTACAATTATGGGTCCTCCAGACAGTCCCTATGCTGGAGGTGTTTTCCTAGTGACTATTCATTTCCCTCCAGATTATCCCTTTAAGCCACCCAAGGTTGCATTCAGGACGAAGGTGTTCCACCCAAATATAAATAGCAATGGAAGCATTTGCCTTGATATATTGAAGGAGCAGTGGAGCCCTGCTCTAACCATTTCCAAGACAGACAGGAACAAGTACGAGTCAACTGCAAGAAGCTGGACCCAGAAATATGCCATGGGCTAATTGACATAGAGAAGAGAGCGATTTTTACTTTCAGTGTTTAGGCCAAACAGCCTTGTATGAATATTTGTGGTCTTCGATTAAGGCCCCTCCAGTTGAAGATGAATGGGGAAATATTTCTTCTGTTGTCTGTATTGCAGAATGCAAACGCTACTTTTAAAACAGTGAAATGTAAGCCCAATTAAAAAGTTTAAAATTTTAACCTTGTATTGACAGTATTGTCGAATATTTAGAGAATGATTGGTTTGCTCTGTTATTCTGTTTTAGTTAATAATTGTGATTTGTGAAGTACCCATCTCGATCTTGTATTAAGATTTTATAAATGAAATTCGTAAAACAGCCATTTTATTCA

>Glyma.14g124300.3 sequence-type=transcript locus=Glyma.14g124300 ID=Glyma.14g124300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTGGAACCAAtaaataataaataaataattacataaaataataacaataattaattattaattaattaattaTAGAAGAATAACCCAAACCCAATCAATCACAGAGAAGAAGATCGATTCCGAAGCCCCACATACCATTTGTTATTCATATAAAAACTCGTTTTCCTTCTCCATTTCTCGTCGCACCTTTTCctcttctctctctttctctctttctAGTTCGTGTTCTTCGTCGCAAATCCGAAGTAGGATCTCTCTTGTTTTTTCTCTAGGTTTTTCGCGATGGCGTCGAAGCGAATTTTGAAGGAGCTTAAGGATTTGCAGAAGGATCCTCCAACATCTTGCAGTGCCGGTCCTGTTCATGAAGATATGTTTCATTGGCAAGCTACAATTATGGGTCCTCCAGACAGTCCCTATGCTGGAGGTGTTTTCCTAGTGACTATTCATTTCCCTCCAGATTATCCCTTTAAGCCACCCAAGGTTGCATTCAGGACGAAGGTGTTCCACCCAAATATAAATAGCAATGGAAGCATTTGCCTTGATATATTGAAGGAGCAGTGGAGCCCTGCTCTAACCATTTCCAAGGTAACCTGGTGCTTGGACAAACTGGCTCAATCGGTCTGTCCAGTGCAGGCTTCCCAACACTAGTATTAGTCTATATATGATGTTCTTGTGTCTTGAAGTTTGAATGTCATCCATTGATCCATATAAAGCTTGGTTGTTTTCATTGTTGAAGTTATGCTGGCTGATTTGCATGAAGTTTGTATTGATGTGATCAGTTTTGAACTGATCCCATGCAGGGGGTTTAGCTGAGTCCAAAATTTCTTCTTTAAACTATGTACTTTGACATCATTGTTTACTTTGTTTATATGTATTTGGCATCTTTAGGTGTTGCTCTCAATTTGTTCCCTGTTGACGGACCCAAATCCTGATGATCCTTTGGTCCCCGAAATTGCACACATGTACAAGACAGACAGGAACAAGTACGAGTCAACTGCAAGAAGCTGGACCCAGAAATATGCCATGGGCTAATTGACATAGAGAAGAGAGCGATTTTTACTTTCAGTGTTTAGGCCAAACAGCCTTGTATGAATATTTGTGGTCTTCGATTAAGGCCCCTCCAGTTGAAGATGAATGGGGAAATATTTCTTCTGTTGTCTGTATTGCAGAATGCAAACGCTACTTTTAAAACAGTGAAATGTAAGCCCAATTAAAAAGTTTAAAATTTTAACCTTGTATTGACAGTATTGTCGAATATTTAGAGAATGATTGGTTTGCTCTGTTATTCTGTTTTAGTTAATAATTGTGATTTGTGAAGTACCCATCTCGATCTTGTATTAAGATTTTATAAATGAAATTCGTAAAACAGCCATTTTATTCA

Coding sequences of Glyma.14g124300

Limit To All Plant Sequences

>Glyma.14g124300.1 sequence-type=CDS polypeptide=Glyma.14g124300.1.p locus=Glyma.14g124300 ID=Glyma.14g124300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGTCGAAGCGAATTTTGAAGGAGCTTAAGGATTTGCAGAAGGATCCTCCAACATCTTGCAGTGCCGGTCCTGTTCATGAAGATATGTTTCATTGGCAAGCTACAATTATGGGTCCTCCAGACAGTCCCTATGCTGGAGGTGTTTTCCTAGTGACTATTCATTTCCCTCCAGATTATCCCTTTAAGCCACCCAAGGTTGCATTCAGGACGAAGGTGTTCCACCCAAATATAAATAGCAATGGAAGCATTTGCCTTGATATATTGAAGGAGCAGTGGAGCCCTGCTCTAACCATTTCCAAGGTGTTGCTCTCAATTTGTTCCCTGTTGACGGACCCAAATCCTGATGATCCTTTGGTCCCCGAAATTGCACACATGTACAAGACAGACAGGAACAAGTACGAGTCAACTGCAAGAAGCTGGACCCAGAAATATGCCATGGGCTAA

>Glyma.14g124300.2 sequence-type=CDS polypeptide=Glyma.14g124300.2.p locus=Glyma.14g124300 ID=Glyma.14g124300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGTCGAAGCGAATTTTGAAGGAGCTTAAGGATTTGCAGAAGGATCCTCCAACATCTTGCAGTGCCGGTCCTGTTCATGAAGATATGTTTCATTGGCAAGCTACAATTATGGGTCCTCCAGACAGTCCCTATGCTGGAGGTGTTTTCCTAGTGACTATTCATTTCCCTCCAGATTATCCCTTTAAGCCACCCAAGGTTGCATTCAGGACGAAGGTGTTCCACCCAAATATAAATAGCAATGGAAGCATTTGCCTTGATATATTGAAGGAGCAGTGGAGCCCTGCTCTAACCATTTCCAAGACAGACAGGAACAAGTACGAGTCAACTGCAAGAAGCTGGACCCAGAAATATGCCATGGGCTAA

>Glyma.14g124300.3 sequence-type=CDS polypeptide=Glyma.14g124300.3.p locus=Glyma.14g124300 ID=Glyma.14g124300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGTCGAAGCGAATTTTGAAGGAGCTTAAGGATTTGCAGAAGGATCCTCCAACATCTTGCAGTGCCGGTCCTGTTCATGAAGATATGTTTCATTGGCAAGCTACAATTATGGGTCCTCCAGACAGTCCCTATGCTGGAGGTGTTTTCCTAGTGACTATTCATTTCCCTCCAGATTATCCCTTTAAGCCACCCAAGGTTGCATTCAGGACGAAGGTGTTCCACCCAAATATAAATAGCAATGGAAGCATTTGCCTTGATATATTGAAGGAGCAGTGGAGCCCTGCTCTAACCATTTCCAAGGTAACCTGGTGCTTGGACAAACTGGCTCAATCGGTCTGTCCAGTGCAGGCTTCCCAACACTAG

Predicted protein sequences of Glyma.14g124300

Limit To All Plant Sequences

>Glyma.14g124300.1.p sequence-type=predicted peptide transcript=Glyma.14g124300.1 locus=Glyma.14g124300 ID=Glyma.14g124300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASKRILKELKDLQKDPPTSCSAGPVHEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYESTARSWTQKYAMG*

>Glyma.14g124300.2.p sequence-type=predicted peptide transcript=Glyma.14g124300.2 locus=Glyma.14g124300 ID=Glyma.14g124300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASKRILKELKDLQKDPPTSCSAGPVHEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKTDRNKYESTARSWTQKYAMG*

>Glyma.14g124300.3.p sequence-type=predicted peptide transcript=Glyma.14g124300.3 locus=Glyma.14g124300 ID=Glyma.14g124300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASKRILKELKDLQKDPPTSCSAGPVHEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTWCLDKLAQSVCPVQASQH*

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