SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.14g123200

Feature Type:gene_model
Chromosome:Gm14
Start:18396863
stop:18398785
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g123200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G21360.1AT glycolipid transfer protein 2 JGI N/AIEA
GO:0046836GO-bp glycolipid transport JGI N/AIEA
GO:0120009GO-bp intermembrane lipid transfer EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm JGI N/AIEA
GO:0017089GO-mf glycolipid transporter activity JGI N/AIEA
GO:0051861GO-mf glycolipid binding JGI N/AIEA
GO:0120013GO-mf intermembrane lipid transfer activity EnsemblGenomesN/AIEA
KOG3221 KOG Glycolipid transfer protein JGI N/AIEA
PTHR10219Panther GLYCOLIPID TRANSFER PROTEIN-RELATED JGI N/AIEA
PTHR10219:SF4Panther JGI N/AIEA
PF08718PFAM Glycolipid transfer protein (GLTP) JGI N/AIEA

Expression Patterns of Glyma.14g123200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g123200 not represented in the dataset
Glyma.14g123200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.14g123200 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g28652 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.14g123200
>Glyma.14g123200.2 sequence-type=transcript locus=Glyma.14g123200 ID=Glyma.14g123200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAGAAGGAAGGGAACAAAAATGAAGAGCACTAGGAGAGAAATGGAGAAGAAGTCGGAGATAGGTTCAGCCATTGAAGAGCTTTCTACGATGACCATAGTTAAACCTGGTGAAAATCACGGGTCTGCCCACATCCCCACTAAGCCTTTTCTCTCTGTTTGTTACTTCGTTCTTCAAGTTCTTGATAAGATAGGGCCAACAATGACTGTTATGAGACAAGACGTGCACCAGAATATTAAGACCTTGGAACTGATGCATGAATCAAATCCCTCATTGAACTCGAATTTGGTTGAGATATTGAAGTCAGAAGCAAGAGAAGGCAATGCTAGGAAAGGGTCAAGCTGCAGTAAGGCCCTTGTTTGGCTTACTAGGACCCTGGATTTCGCCTCGTTGTTGTTACACACACTGGCAAAAGATCCTGAAAAGAGAATGGAGCAAGTAGTTGAAGAGGCTTATGATGTAACTTTAAAACCGAGGCATGGATGGATTTCATCTGCTGCTTTCAGAGTGGCTCTAAGACTGGTCCCAGAAAGTAAAACATTCGTAAATATTCTTAAAACTGAAGATGAAAACTATGACACCCTAAAGGAGAACATGCAGATGCTGGTTTCTCTATTTGTGCCTTTTCTTGAGGATATGCATTGTATTCTAAGATTGTACAACTTGGACAAGCTAAAGTCAACCTAAAGTCAAAGAGAGAAGAGCCAATGTGTAGTTTCATGTATTATGGCTTCCCTAAGAGAAATTATTAAACGATCCAACACGAATCATATGGTCTCGGTGAATCTCTAGATGATATGCAATTAACTATTATTAATTTTTCTCTTAAATTAAAAACTTAAATACATATATACCATACAGAGATCGATTAATATTATGGACAAGTGATGATTCTACACTTCATAATAATTCTTCCTTCATATGATATGGTTACTTTCATATAAACGAAGATGTAAATAGCTTGTATATTAACTGATAAAAAAATAGTTTGTATACCAAAATTTGTATGACACAATTATGTAGTTATAGTTTTTTTTAAGCAATTGTGTAGCTACCTCAA
Coding sequences of Glyma.14g123200
>Glyma.14g123200.1 sequence-type=CDS polypeptide=Glyma.14g123200.1.p locus=Glyma.14g123200 ID=Glyma.14g123200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGAGCACTAGGAGAGAAATGGAGAAGAAGTCGGAGATAGGTTCAGCCATTGAAGAGCTTTCTACGATGACCATAGTTAAACCTGGTGAAAATCACGGGTCTGCCCACATCCCCACTAAGCCTTTTCTCTCTGTTTGTTACTTCGTTCTTCAAGTTCTTGATAAGATAGGGCCAACAATGACTGTTATGAGACAAGACGTGCACCAGAATATTAAGACCTTGGAACTGATGCATGAATCAAATCCCTCATTGAACTCGAATTTGGTTGAGATATTGAAGTCAGAAGCAAGAGAAGGCAATGCTAGGAAAGGGTCAAGCTGCAGTAAGGCCCTTGTTTGGCTTACTAGGACCCTGGATTTCGCCTCGTTGTTGTTACACACACTGGCAAAAGATCCTGAAAAGAGAATGGAGCAAGTAGTTGAAGAGGCTTATGATGTAACTTTAAAACCGAGGCATGGATGGATTTCATCTGCTGCTTTCAGAGTGGCTCTAAGACTGGTCCCAGAAAGTAAAACATTCGTAAATATTCTTAAAACTGAAGATGAAAACTATGACACCCTAAAGGAGAACATGCAGATGCTGGTTTCTCTATTTGTGCCTTTTCTTGAGGATATGCATTGTATTCTAATTGTACAACTTGGACAAGCTAAAGTCAACCTAAAGTCAAAGAGAGAAGAGCCAATGTGTAGTTTCATGTATTATGGCTTCCCTAAGAGAAATTATTAA

>Glyma.14g123200.2 sequence-type=CDS polypeptide=Glyma.14g123200.2.p locus=Glyma.14g123200 ID=Glyma.14g123200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGAGCACTAGGAGAGAAATGGAGAAGAAGTCGGAGATAGGTTCAGCCATTGAAGAGCTTTCTACGATGACCATAGTTAAACCTGGTGAAAATCACGGGTCTGCCCACATCCCCACTAAGCCTTTTCTCTCTGTTTGTTACTTCGTTCTTCAAGTTCTTGATAAGATAGGGCCAACAATGACTGTTATGAGACAAGACGTGCACCAGAATATTAAGACCTTGGAACTGATGCATGAATCAAATCCCTCATTGAACTCGAATTTGGTTGAGATATTGAAGTCAGAAGCAAGAGAAGGCAATGCTAGGAAAGGGTCAAGCTGCAGTAAGGCCCTTGTTTGGCTTACTAGGACCCTGGATTTCGCCTCGTTGTTGTTACACACACTGGCAAAAGATCCTGAAAAGAGAATGGAGCAAGTAGTTGAAGAGGCTTATGATGTAACTTTAAAACCGAGGCATGGATGGATTTCATCTGCTGCTTTCAGAGTGGCTCTAAGACTGGTCCCAGAAAGTAAAACATTCGTAAATATTCTTAAAACTGAAGATGAAAACTATGACACCCTAAAGGAGAACATGCAGATGCTGGTTTCTCTATTTGTGCCTTTTCTTGAGGATATGCATTGTATTCTAAGATTGTACAACTTGGACAAGCTAAAGTCAACCTAA
Predicted protein sequences of Glyma.14g123200
>Glyma.14g123200.1.p sequence-type=predicted peptide transcript=Glyma.14g123200.1 locus=Glyma.14g123200 ID=Glyma.14g123200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKSTRREMEKKSEIGSAIEELSTMTIVKPGENHGSAHIPTKPFLSVCYFVLQVLDKIGPTMTVMRQDVHQNIKTLELMHESNPSLNSNLVEILKSEAREGNARKGSSCSKALVWLTRTLDFASLLLHTLAKDPEKRMEQVVEEAYDVTLKPRHGWISSAAFRVALRLVPESKTFVNILKTEDENYDTLKENMQMLVSLFVPFLEDMHCILIVQLGQAKVNLKSKREEPMCSFMYYGFPKRNY*

>Glyma.14g123200.2.p sequence-type=predicted peptide transcript=Glyma.14g123200.2 locus=Glyma.14g123200 ID=Glyma.14g123200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKSTRREMEKKSEIGSAIEELSTMTIVKPGENHGSAHIPTKPFLSVCYFVLQVLDKIGPTMTVMRQDVHQNIKTLELMHESNPSLNSNLVEILKSEAREGNARKGSSCSKALVWLTRTLDFASLLLHTLAKDPEKRMEQVVEEAYDVTLKPRHGWISSAAFRVALRLVPESKTFVNILKTEDENYDTLKENMQMLVSLFVPFLEDMHCILRLYNLDKLKST*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo