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Report for Sequence Feature Glyma.14g114900

Feature Type:gene_model
Chromosome:Gm14
Start:13635763
stop:13649892
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g114900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G15850.1AT RNA helicase 1 JGI N/AIEA
GO:0010501GO-bp RNA secondary structure unwinding EnsemblGenomesN/AIEA
GO:0005730GO-cc nucleolus EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0004004GO-mf ATP-dependent RNA helicase activity EnsemblGenomesN/AIEA
GO:0004386GO-mf helicase activity EnsemblGenomesN/AIEA
GO:0004386GO-mf helicase activity JGI N/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0008026GO-mf ATP-dependent helicase activity JGI N/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
KOG0330 KOG ATP-dependent RNA helicase JGI N/AIEA
PTHR24031Panther FAMILY NOT NAMED JGI N/AIEA
PTHR24031:SF18Panther JGI N/AIEA
PF00270PFAM DEAD/DEAH box helicase JGI N/AIEA
PF00271PFAM Helicase conserved C-terminal domain JGI N/AIEA

Expression Patterns of Glyma.14g114900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g114900 not represented in the dataset
Glyma.14g114900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.14g114900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g14113 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g114900
>Glyma.14g114900.1 sequence-type=CDS polypeptide=Glyma.14g114900.1.p locus=Glyma.14g114900 ID=Glyma.14g114900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTACCATGGATGCGCCACCCTGTCGACATCACTCGCTGTCAAGAACTCCCCGTTTGTAGTGTCACACTTTGGCAAGAAACGGTTGGACCAAGTGACTTTGAGCGAGACCTTTGCATAAACTCGCCCACCGGAAGGGGCAAAACTTTGGCCTATGCTCTTCCCCTTCATTCAAAACTTGTTAAGCGTGTCTTCGACGCCCTTGCATCACTGTTGGGTCTCCGTATTGGCTTGGCTGCTGGTCAATCTTCGCTTCGCCACGAGTTTTCTAGCCTCATTTTTCTACCCAGAGAAGATGACGGTCCAAATCCTGGGTTTTTGTCTTCGTTGTGGTTCCAAAGCAAGGTCAACATATTGGTAGCGACCCTTGGAAGGCTAGTGGACCATGTCAACAAGTTGTCGTTGAAGCATCTTCGTTATCTCGTGGTTGACGAAGCAGATCGATTTCTACATGAGGACTACCAGTCCTGGTTGCCTACTGTGATTAAATTAACTCAGTTTGGGCTGGCAAAGATAGTTTTATTTGCTATGTTAACTCGGGGCCCAGGAAGGCTTGCTCAACTTATTTTGCATTACCTTTTATTCCTGAGTGCTGGGAAAATGTGTTATCGGCTCCCAGAATATTTGGAATGTTACAAACTGATATGTGAAAGAAAGGTCAAACCCTTGTATTTGGTTGCCCTTTTGAAATCCCTAGGAGAAGAAAAATGCATAGTTTTTACAAGATTTGTGGAATCAACACATCATCTCTGCAAATTGCTAAATTTTTTTGGTGATCTTAAAATTGGTATCAAGGAGTTTTCTGGTCTAAAACATCAACAGGTAAGAAGCAAGACAGTAGGTGAATTTCAGAGAAGGGAGTTTCAAGTTCTTGTATCTTCTGATGCAATGACTCGGGTAATGGATGTTGAAGGGTTAAGAAATGTCATTAATTATGACGTGCCCAAATACACAAAGACGTATGTTCATCGACCTGGTAGAACTGCAAGAGCTGGCCAGACTGGGTGTTGCTTTACATTGATGTCAAAAGATGAGGTCGGAGGATTTGAGAAGTTGATGAAAAAGGCGGAGGCCAGTGATTGTCTTCAGCATACTGTTCCATCCAGTTTGATTGAAGCACTTCATAGTACCTACAGTTCA
Predicted protein sequences of Glyma.14g114900
>Glyma.14g114900.1.p sequence-type=predicted peptide transcript=Glyma.14g114900.1 locus=Glyma.14g114900 ID=Glyma.14g114900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
LPWMRHPVDITRCQELPVCSVTLWQETVGPSDFERDLCINSPTGRGKTLAYALPLHSKLVKRVFDALASLLGLRIGLAAGQSSLRHEFSSLIFLPREDDGPNPGFLSSLWFQSKVNILVATLGRLVDHVNKLSLKHLRYLVVDEADRFLHEDYQSWLPTVIKLTQFGLAKIVLFAMLTRGPGRLAQLILHYLLFLSAGKMCYRLPEYLECYKLICERKVKPLYLVALLKSLGEEKCIVFTRFVESTHHLCKLLNFFGDLKIGIKEFSGLKHQQVRSKTVGEFQRREFQVLVSSDAMTRVMDVEGLRNVINYDVPKYTKTYVHRPGRTARAGQTGCCFTLMSKDEVGGFEKLMKKAEASDCLQHTVPSSLIEALHSTYSS






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