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Report for Sequence Feature Glyma.14g108000

Feature Type:gene_model
Chromosome:Gm14
Start:11633177
stop:11634883
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g108000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G12440.1AT adenine phosphoribosyl transferase 4 JGI N/AIEA
GO:0006168GO-bp adenine salvage EnsemblGenomesN/AIEA
GO:0009116GO-bp nucleoside metabolic process EnsemblGenomesN/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0003999GO-mf adenine phosphoribosyltransferase activity EnsemblGenomesN/AIEA
PTHR11776Panther ADENINE PHOSPHORIBOSYLTRANSFERASE JGI N/AIEA
PWY-5043SoyCyc9 purine nucleosides salvage II (plant) Plant Metabolic Network ISS
PWY-6605SoyCyc9 adenine and adenosine salvage II Plant Metabolic Network ISS
GN7V-59032SoyCyc9-rxn adenine phosphoribosyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.14g108000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g108000 not represented in the dataset
Glyma.14g108000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.14g108000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g12850 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g108000
>Glyma.14g108000.1 sequence-type=CDS polypeptide=Glyma.14g108000.1.p locus=Glyma.14g108000 ID=Glyma.14g108000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGTTCGCGCTAATTCATGAACACTCTCGCTTGAGCTCCTGCTTCCCTGTTTCTCTTAAACCACATGTCTACCGTGACCTCGCTGTGACCTGTGGCATTTGCCCGCACCCCCGTGACCTCGTTGTTGTGCAAATGTTGCCTTGCTCTAAAAAAGTAATGTTTGAATGCATTAAAAATGAATTCCTTCTCTGTTTTGTAGGAATTGAAGCTCGGGGTTTCATTTTTGGTTCTCCCATTGCACTGGCAATAAGAGCAAAGTTTGTACCATTGAGGAAACCGAAAAAATTTCCTGAGCATATTCTGGAATACGGAAGAGACTGTCTTGAGATGCATGTTGTTGTTGATGATTTGATTGCAACTGGTGGAAAACTTTGTGCAGCTATGGACTTACTAGGTAATCACTCTATTATCTCTCTTTGTATATCAATAATCCCTCTACCTGCATACAAGCTTTTCGCCTCCAAGTGA
Predicted protein sequences of Glyma.14g108000
>Glyma.14g108000.1.p sequence-type=predicted peptide transcript=Glyma.14g108000.1 locus=Glyma.14g108000 ID=Glyma.14g108000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLFALIHEHSRLSSCFPVSLKPHVYRDLAVTCGICPHPRDLVVVQMLPCSKKVMFECIKNEFLLCFVGIEARGFIFGSPIALAIRAKFVPLRKPKKFPEHILEYGRDCLEMHVVVDDLIATGGKLCAAMDLLGNHSIISLCISIIPLPAYKLFASK*






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