Glyma.14g102600

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Report for Sequence Feature Glyma.14g102600

Feature Type:	gene_model
Chromosome:	Gm14
Start:	10180714
stop:	10191178
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.14g102600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G31810.1	AT	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	JGI	N/A	IEA
GO:0008152	GO-bp	metabolic process	JGI	N/A	IEA
GO:0003824	GO-mf	catalytic activity	JGI	N/A	IEA
GO:0003860	GO-mf	3-hydroxyisobutyryl-CoA hydrolase activity	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
KOG1684	KOG	Enoyl-CoA hydratase	JGI	N/A	IEA
PTHR11941	Panther	ENOYL-COA HYDRATASE-RELATED	JGI	N/A	IEA
PTHR11941:SF19	Panther	ENOYL-COA HYDRATASE/ISOMERASE DOMAIN-CONTAINING PROTEIN	JGI	N/A	IEA
PF00378	PFAM	Enoyl-CoA hydratase/isomerase family	JGI	N/A	IEA
VALDEG-PWY	SoyCyc9	L-valine degradation I	Plant Metabolic Network		ISS
GN7V-60892	SoyCyc9-rxn	3-hydroxyisobutyryl-CoA hydrolase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.14g102600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g102600 not represented in the dataset	Glyma.14g102600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.14g102600

Paralog	Evidence	Comments
Glyma.17g222800	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g102600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma14g11860	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.14g102600

Limit To All Plant Sequences

>Glyma.14g102600.2 sequence-type=transcript locus=Glyma.14g102600 ID=Glyma.14g102600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGTTACCGAGGGAAAGCGTTCTTCAATTTCAGAGTTCGGGCTTCATTTCAGACTCAGAGTAACACTACAGTACAGAGTACAAACATCAAACACCTTCTCTGCACGCAAAAACCAGAATCGAAGATGCAGAGATTTAAAGCTCTGCTACCTCAACAAACTAGGTCCTCACTTCGCACTTTCTGTTCTCACCGTCGAGCTTTCTCCGCTCAACCAAATTACTCAGAGCACCACGACGACGATTCTCAGGAACAGATTTTGGTCGAAGGAAGAGCGAAATCGCGAGCAGCCATTCTCAACAGGCCGTCTTCGCTGAACTCGCTCAATGCTTCAATGGTTGCTCGGTTGAAGAGGCTGTATGATTCCTGGGAAGAGAACTCTGATATTGGCTTTGTTCTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGTTGTATCAATCACTCAATGAAGGAAATACTGACGAAGCTGAACAGTTTTTTAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCCCATGTTGCCATTTTGGATGGCATAACAATGGGATGTGGATCTGGAATTTCTCTGCCAGGGATGTTTCGTGTGGTAACTGATAAAACTATTTTTTCTCACCCAGAAACTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATATTTTGTCTCGTCTACCTGGCTACTTAGGGGAATACTTGGCCCTCACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCCGCCTTGCTACTCATTATTCACTAAATGCAAGGCTTGCTTTGCTTGAAGAACGTCTTGGTAAACTAATCACAGATGAACCTTCTGTTGTGGAGGCATCCCTTGCACAGTATGGTGATCTTGTTTATCCAGATAGGAGCAGTGTCCTTCACAGGATTGATACAATTGATAGATGTTTCAGTCAAGAAACTGTGGAGGAAATTATTGAAGCTTTGGGGAAAGAAGCTACTGAATCTTGTGACGAATGGTGTTTGAATACTCTAAGGAGAATAAGAGAAGCCTCCCCTTTGAGTTTGAAAGTTACTTTACAATCTATACGTGAAGGTAGATTTGAAACTCTCGATAAATGTCTTATACGTGAGTACCGCATGTCCCTACGTGGAATTTCTAAGCTTGTCTCCTCTGATTTCTTCGAGGGTGTTCGAGCACGAATGGTTGATAAAGATTTTGCACCAAAGTGGGACCCACCTAGTTTAAAAGATATATCAGAGGACATGATTGAATACTATTTCTCTCCTTTAAGTGAAGTTCAATCTGAACTAGTGCTGCCAACGGCTTTGCGAGAACCTTACATGTGAAACTAGCATACCTCTAAGCAATGCTCTTAGCAAGGGTAAGACAAATAAGTTCTAATTTTGTTCTCAAACTTCATTAGAAGTTTTTAAAATATGTTTGTTGTATTGGCATAAAAATGTAGAAGTCACACTTGTATTTTTGGTGGGGAGAGGTGGTTGAATTATTCGCAGTCTTTCATGAAAATGTAGATCATCTAATTTTCTCACTCATCACAATGTCAATTCGTTGGCCATCCCTAGAGTCACCAAGAGGAAGAATTATTAAATACTAGTAGGTGGTGTGTAAACT

Coding sequences of Glyma.14g102600

Limit To All Plant Sequences

>Glyma.14g102600.1 sequence-type=CDS polypeptide=Glyma.14g102600.1.p locus=Glyma.14g102600 ID=Glyma.14g102600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAGATTTAAAGCTCTGCTACCTCAACAAACTAGGTCCTCACTTCGCACTTTCTGTTCTCACCGTCGAGCTTTCTCCGCTCAACCAAATTACTCAGAGCACCACGACGACGATTCTCAGGAACAGATTTTGGTCGAAGGAAGAGCGAAATCGCGAGCAGCCATTCTCAACAGGCCGTCTTCGCTGAACTCGCTCAATGCTTCAATGGTTGCTCGGTTGAAGAGGCTGTATGATTCCTGGGAAGAGAACTCTGATATTGGCTTTGTTCTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGTTGTATCAATCACTCAATGAAGGAAATACTGACGAAGCTGAACAGTTTTTTAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCCCATGTTGCCATTTTGGATGGCATAACAATGGGATGTGGATCTGGAATTTCTCTGCCAGGGATGTTTCGTGTGGTAACTGATAAAACTATTTTTTCTCACCCAGAAACTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATATTTTGTCTCGTCTACCTGGCTACTTAGGGGAATACTTGGCCCTCACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCCGCCTTGCTACTCATTATTCACTAAATGCAAGGCTTGCTTTGCTTGAAGAACGTCTTGGTAAACTAATCACAGATGAACCTTCTGTTGTGGAGGCATCCCTTGCACAGTATGGTGATCTTGTTTATCCAGATAGGAGCAGTGTCCTTCACAGGATTGATACAATTGATAGATGTTTCAGTCAAGAAACTGTGGAGGAAATTATTGAAGCTTTGGGGAAAGAAGCTACTGAATCTTGTGACGAATGGTGTTTGAATACTCTAAGGAGAATAAGAGAAGCCTCCCCTTTGAGTTTGAAAGTTACTTTACAATCTATACGTGAAGGTAGATTTGAAACTCTCGATAAATGTCTTATACGTGAGTACCGCATGTCCCTACGTGGAATTTCTAAGCTTGTCTCCTCTGATTTCTTCGAGGGTGTTCGAGCACGAATGGTTGATAAAGATTTTGCACCAAAGTGGGACCCACCTAGTTTAAAAGATATATCAGAGGACATGATTGAATACTATTTCTCTCCTTTAAGTGAAGTTCAATCTGAACTAGTGCTGCCAACGGCTTTGCGAGAACCTTACATGTGA

>Glyma.14g102600.2 sequence-type=CDS polypeptide=Glyma.14g102600.2.p locus=Glyma.14g102600 ID=Glyma.14g102600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGAGATTTAAAGCTCTGCTACCTCAACAAACTAGGTCCTCACTTCGCACTTTCTGTTCTCACCGTCGAGCTTTCTCCGCTCAACCAAATTACTCAGAGCACCACGACGACGATTCTCAGGAACAGATTTTGGTCGAAGGAAGAGCGAAATCGCGAGCAGCCATTCTCAACAGGCCGTCTTCGCTGAACTCGCTCAATGCTTCAATGGTTGCTCGGTTGAAGAGGCTGTATGATTCCTGGGAAGAGAACTCTGATATTGGCTTTGTTCTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGTTGTATCAATCACTCAATGAAGGAAATACTGACGAAGCTGAACAGTTTTTTAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCCCATGTTGCCATTTTGGATGGCATAACAATGGGATGTGGATCTGGAATTTCTCTGCCAGGGATGTTTCGTGTGGTAACTGATAAAACTATTTTTTCTCACCCAGAAACTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATATTTTGTCTCGTCTACCTGGCTACTTAGGGGAATACTTGGCCCTCACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCCGCCTTGCTACTCATTATTCACTAAATGCAAGGCTTGCTTTGCTTGAAGAACGTCTTGGTAAACTAATCACAGATGAACCTTCTGTTGTGGAGGCATCCCTTGCACAGTATGGTGATCTTGTTTATCCAGATAGGAGCAGTGTCCTTCACAGGATTGATACAATTGATAGATGTTTCAGTCAAGAAACTGTGGAGGAAATTATTGAAGCTTTGGGGAAAGAAGCTACTGAATCTTGTGACGAATGGTGTTTGAATACTCTAAGGAGAATAAGAGAAGCCTCCCCTTTGAGTTTGAAAGTTACTTTACAATCTATACGTGAAGGTAGATTTGAAACTCTCGATAAATGTCTTATACGTGAGTACCGCATGTCCCTACGTGGAATTTCTAAGCTTGTCTCCTCTGATTTCTTCGAGGGTGTTCGAGCACGAATGGTTGATAAAGATTTTGCACCAAAGTGGGACCCACCTAGTTTAAAAGATATATCAGAGGACATGATTGAATACTATTTCTCTCCTTTAAGTGAAGTTCAATCTGAACTAGTGCTGCCAACGGCTTTGCGAGAACCTTACATGTGA

Predicted protein sequences of Glyma.14g102600

Limit To All Plant Sequences

>Glyma.14g102600.1.p sequence-type=predicted peptide transcript=Glyma.14g102600.1 locus=Glyma.14g102600 ID=Glyma.14g102600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQRFKALLPQQTRSSLRTFCSHRRAFSAQPNYSEHHDDDSQEQILVEGRAKSRAAILNRPSSLNSLNASMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVVRLYQSLNEGNTDEAEQFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTIFSHPETQIGFHPDAGASYILSRLPGYLGEYLALTGDKLNGVEMIACRLATHYSLNARLALLEERLGKLITDEPSVVEASLAQYGDLVYPDRSSVLHRIDTIDRCFSQETVEEIIEALGKEATESCDEWCLNTLRRIREASPLSLKVTLQSIREGRFETLDKCLIREYRMSLRGISKLVSSDFFEGVRARMVDKDFAPKWDPPSLKDISEDMIEYYFSPLSEVQSELVLPTALREPYM*

>Glyma.14g102600.2.p sequence-type=predicted peptide transcript=Glyma.14g102600.2 locus=Glyma.14g102600 ID=Glyma.14g102600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQRFKALLPQQTRSSLRTFCSHRRAFSAQPNYSEHHDDDSQEQILVEGRAKSRAAILNRPSSLNSLNASMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVVRLYQSLNEGNTDEAEQFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTIFSHPETQIGFHPDAGASYILSRLPGYLGEYLALTGDKLNGVEMIACRLATHYSLNARLALLEERLGKLITDEPSVVEASLAQYGDLVYPDRSSVLHRIDTIDRCFSQETVEEIIEALGKEATESCDEWCLNTLRRIREASPLSLKVTLQSIREGRFETLDKCLIREYRMSLRGISKLVSSDFFEGVRARMVDKDFAPKWDPPSLKDISEDMIEYYFSPLSEVQSELVLPTALREPYM*

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