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Report for Sequence Feature Glyma.14g101700

Feature Type:gene_model
Chromosome:Gm14
Start:10063978
stop:10069417
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g101700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G25080.1AT Sas10/Utp3/C1D family JGI N/AIEA
GO:0000460GO-bp maturation of 5.8S rRNA EnsemblGenomesN/AIEA
GO:0000178GO-cc exosome (RNase complex) EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
KOG4835 KOG DNA-binding protein C1D involved in regulation of double-strand break repair JGI N/AIEA
PF04000PFAM Sas10/Utp3/C1D family JGI N/AIEA

Expression Patterns of Glyma.14g101700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g101700 not represented in the dataset
Glyma.14g101700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.14g101700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g11730 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g101700
>Glyma.14g101700.1 sequence-type=CDS polypeptide=Glyma.14g101700.1.p locus=Glyma.14g101700 ID=Glyma.14g101700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGAAAGGAAGAAGCGAAATGGATGGCGTAGAAGTACCTGAAGCCATGATAGATACTCTCAACCGTACTTTGGAGAGCCTTCAACAACTCGAGACACAGTTACCCCAATTTCTCTCTCTCTCCGACCCTGATTTTCTCGCTGAATTACCACTCGTTGAACGCGCTCACTCACTCTTCTCCCTCGCCAAACTCACCTCTACCCTCTTCTCATTGAAGTTGAGGTGTAGAGGTGTTAACCCAAATGGCCACCCTGTCAAATCCGAGCTTGACAAGATAAACGTGTTGCAGAAGAAACTGGAACGGCTTCCGCGGTTCACTGAAGCACAGGAGCAAGACACTAGGAACATAAGTGAAGAGGAGGAGCCAGAGATGAACTATCAGGAACGGACTAGTCAAAAGAGGAAGTATCCATCGTCTGAAGAACAGTTTGTTCAAATTGATGCTGTGGGATCCCTGGTTAAAGTAAAGGAGGAACATGTTGGTGATAATAATGGAAATATTAAGGAAGCAATAGTGATTGACATTTCAGATGATGATGAATGA
Predicted protein sequences of Glyma.14g101700
>Glyma.14g101700.1.p sequence-type=predicted peptide transcript=Glyma.14g101700.1 locus=Glyma.14g101700 ID=Glyma.14g101700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVKGRSEMDGVEVPEAMIDTLNRTLESLQQLETQLPQFLSLSDPDFLAELPLVERAHSLFSLAKLTSTLFSLKLRCRGVNPNGHPVKSELDKINVLQKKLERLPRFTEAQEQDTRNISEEEEPEMNYQERTSQKRKYPSSEEQFVQIDAVGSLVKVKEEHVGDNNGNIKEAIVIDISDDDE*






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