|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G31870.1 | AT | glutathione peroxidase 7 | JGI | N/A | IEA |
GO:0006979 | GO-bp | response to oxidative stress | EnsemblGenomes | N/A | IEA |
GO:0006979 | GO-bp | response to oxidative stress | JGI | N/A | IEA |
GO:0055114 | GO-bp | oxidation-reduction process | EnsemblGenomes | N/A | IEA |
GO:0055114 | GO-bp | oxidation-reduction process | JGI | N/A | IEA |
GO:0098869 | GO-bp | cellular oxidant detoxification | EnsemblGenomes | N/A | IEA |
GO:0004601 | GO-mf | peroxidase activity | EnsemblGenomes | N/A | IEA |
GO:0004602 | GO-mf | glutathione peroxidase activity | EnsemblGenomes | N/A | IEA |
GO:0004602 | GO-mf | glutathione peroxidase activity | JGI | N/A | IEA |
GO:0016491 | GO-mf | oxidoreductase activity | EnsemblGenomes | N/A | IEA |
PTHR11592 | Panther | GLUTATHIONE PEROXIDASE | JGI | N/A | IEA |
PF00255 | PFAM | Glutathione peroxidase | JGI | N/A | IEA |
PWY-4081 | SoyCyc9 | glutathione-peroxide redox reactions | Plant Metabolic Network | ISS | |
GN7V-44649 | SoyCyc9-rxn | phospholipid-hydroperoxide glutathione peroxidase | Plant Metabolic Network | ISS |
Glyma.14g101200 not represented in the dataset |
Glyma.14g101200 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.17g223900 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
>Glyma.14g101200.1 sequence-type=CDS polypeptide=Glyma.14g101200.1.p locus=Glyma.14g101200 ID=Glyma.14g101200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGTGCACTTATGCAGCTTCTTTCCAGGTTTGGAGATTTTAGCTTTCCCCTGCAATCAATTTGGTATGCAAGAACCTGGATCAAATGAAGATATCAAGCAGTTTGCTTGCACTCGATATAAATCAGAATTTCCAAATTTTAATAAGGTTGATGTCAATGAACCATTTACAACTCCAGTGTACCAGTTTCTGAAATCAAGTGCTGGAGGCTTTCTGGGTGATCTTATAAAGTGGAATTTTGAGAAATTCTTGGTTGATAAAAATGGTAAAGTTATTGAAAGATACCCACCAACAATGTCTCCTTTTCAAATTGAGAAGGATATCCAGATGTTACTTGCTGCCTGA
>Glyma.14g101200.1.p sequence-type=predicted peptide transcript=Glyma.14g101200.1 locus=Glyma.14g101200 ID=Glyma.14g101200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MVHLCSFFPGLEILAFPCNQFGMQEPGSNEDIKQFACTRYKSEFPNFNKVDVNEPFTTPVYQFLKSSAGGFLGDLIKWNFEKFLVDKNGKVIERYPPTMSPFQIEKDIQMLLAA*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||