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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G33300.1 | AT | ADR1-like 1 | JGI | N/A | IEA |
GO:0006952 | GO-bp | defense response | EnsemblGenomes | N/A | IEA |
GO:0007165 | GO-bp | signal transduction | EnsemblGenomes | N/A | IEA |
GO:0005886 | GO-cc | plasma membrane | EnsemblGenomes | N/A | IEA |
GO:0043531 | GO-mf | ADP binding | EnsemblGenomes | N/A | IEA |
GO:0043531 | GO-mf | ADP binding | JGI | N/A | IEA |
KOG4658 | KOG | Apoptotic ATPase | JGI | N/A | IEA |
PTHR23155 | Panther | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | JGI | N/A | IEA |
PTHR23155:SF282 | Panther | JGI | N/A | IEA | |
PF00560 | PFAM | Leucine Rich Repeat | JGI | N/A | IEA |
PF00931 | PFAM | NB-ARC domain | JGI | N/A | IEA |
PF05659 | PFAM | Arabidopsis broad-spectrum mildew resistance protein RPW8 | JGI | N/A | IEA |
Glyma.14g079500 not represented in the dataset |
Glyma.14g079500 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.17g245600 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma14g08700 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.14g079500.2 sequence-type=transcript locus=Glyma.14g079500 ID=Glyma.14g079500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 AATCATTTCCCGAAGGCACCAGCGAGAGTCAGTGCTGACTCTTATAATATATGAAGAAACAAAAAGAAAAGAAAAATAGCACTAGTTGGCGCAAAACCATGGTGCTAACGGAGTTCTTCCACGCCGAGATCTCATCGGAGCTATGGAAAATGCTGGTGTCAATTTCCCGAAAAGCCCTCCGCTGCAAGTCGAGCGCCAAGAGCCTCATCTCCTACGTCCACGAGCTCCTTCCGACGATCGAAGAGATCAAGTACTCCGGCGTGGAGCTGCCGGCGCCGCGCCAGTCGCAGGTCGACCGCCTCTCGGAGATCCTCCGCTCCGGCGTCGAGCTCTCCCACCAGGCCCTCTCCTCCTCGCGCTGGAACGTCTACCGCAACTTCCAGCTCGCCAAAAAAATGGAGAAGCTCGAGAAGCACGTGACAAGGTTCTTGCAGGTTCCCATGCAGGCGCATATATTGGCGGACGTGAACCACGTGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGGCGAACCAGAGGATGGAGAAGTTTATCGGGGAGATGAAGATTGGAGTGAACGGGGGAGGGTGGGTGGAGGAGGCTGTGAGGAGTATGCAGGAGGATGAGACGTGGGTTGAAGGGTGTAATGGGAACAATAACGGTTTTGGGGTTGGGTTGGAGTTCGGGAAGAACAAGGTTATGGAGATGGTTTTTACGAGGAGTGATGTTTCTGTTGTCGGGATTTGGGGGATTGGTGGGTCCGGGAAAACCACTCTTGCTAGAGAAGTCTGCAGAGATGACCAAGTGAGATGTTATTTCAAGGAGAGGATCTTGTTTTTGACTGTGTCACAGTCCCCGAATCTGGAGCAGCTGAGAGCGAGGATCTGGGGACACGTCATGGGCAACCAAGTGCTGGAGCAGCTTGTGTGGAAAATTCCTGGCTGCAAATTCCTTGTGGTGTCCAGATTTAATTTCCCAACAATTTTTAATGCCACTTATCGTGTGGAGTTGCTGGGTGAACATGATGCCCTTTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATTCCAATGGGTGCTAATGTGAGTTTGGTGAAGCAGGTTGTGGCCGAGTGTGGAAGGCTTCCACTGGCTCTGAAGGTGATTGGAGCTTCTTTGCGAGACCAGAATGAAATGTTTTGGTTGAGTGTTAAAAGCAGGCTCTCTCAAGGCCAAAGCATTGGTGAATCCTATGAAATCCATCTGATTGATAGAATGGCAATTAGTACTAACTACCTGCCAGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGTTCTTTTCCTGAGGATAGAAAAATTCCTCTGGAAGTTTTAATCAATATGTGGGTTGAAATTCATGACATCAATGAAACGGAAGCATATGCCATTGTGGTTGAGCTTTCAAACAAGAATCTTCTCACCTTAGTAAAAGAAGCACGTGCCGGGGGCATGTATAGCAGTTGCTTTGAGATTTCTGTCACTCAACATGATATATTGAGGGACCTTGTTCTTCATTTGTGCAACCGTGGCAGCATTCATCAACACCGAAGGCTAGTTATGGCTAAACGAAAAGAAAATGGACTACTTCCCAAAGAATGGTCTAGATACAAGGACCAACCCTTTGAAGCACAGATTGTTTCAATCAACACAGGGGCAATGACCAAAATGGACTGGTTTGAGCTGGATTTTCCCAAGGCTGAAGTGTTGATCATTAATTTCACATCCAGTGATTACTTTTTACCTCCCTTCATCAATAAAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGCACCTCATATGCCCGCCTTCAAAATGTTTCAGTTTTTAGGAATTTGACCAACTTGAGAAGTCTCTGGCTTGAAAAGGTTTCCATCCCTCAGTTATCAGGCAGTGTCTTGCAAAACTTGGGCAAATTATTTGTAGTCCTCTGCAAAATTAACAACAGTTTGGATGGGAAACAATTCCCTAACCTCTCTGAGCTCACTCTTGATCACTGTGATGATCTAACTCAATTGCCCTCAAGCATTTGTGGAATAAAGTCACTACAAAACTTGAGTGTCACCAACTGCCACCATTTGAGTCAACTACCTGTTGAATTTGGCAAACTAAGATCACTAGAGATCCTCCGTTTATATGCTTGTCCAGATCTAGAAACACTTCCTCCTAGCATGTGTGACATGAAGAGATTGAAGTATATTGATATTTCTCAATGTGTTAACCTTTCATGCTTCCCTGAAGAGATTGGTAGATTAGTATGCTTAGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGTATTTACCAAAGTCTGCAGTGGCATTGCAATCTCTGCAGCTTGTAATTTGTGATGAGGAGGTATATGGTATGTGGAGAGATGTTGAGATGGCCAACTCAAATGTCCTTATTAAAGTAGCAGAACAACACTATGATCTAGACTGGCTTCAAGAGTGACCCATGTGTCTACGTTCTTGGGATGTTTTACCTTCCCAATTCGTTGCACTTGTATATACTTATTCATAGCCTCAATTCTGAAAAGGAATTTTTCTTTTTCCAAAAAGCTAATTTCCGTGATGGTGAAAACTGTGGCACAATATTTTCACTATAGTTCCTAGAATTAATGCCAGCAGTAGCCAGTGATAACCCATATTTAGTTATTATTAGGACTTCAACGGTGATGCACGTAAACTAATTTATATTCTCATTTAATTATAAATCATCTTTATTTCAGTGTATAATCTTTCTTCTGAAAGTATCTTGAGGCCACCATCACCATATGTGTACATGCACATTGTACATGTGCGACCGGTTCTTATCACATTCCTCCACCTCCTAATGGGCATGTTCTAGATTAATGAGAAAACGCGTAAAAGAGAATCATAAAAACAAAAACTGAAAGCAACCCTTGGGATTGAACTCACCAGATTCGTACAGGTCACTGTCATGTATCTTCTACCTTGAAGCTTCCTTACTCGATTTCTTATCTCTTCTTCTTTCAATATTGTCTCTTTGGTCAATGTCTTTCTTTGATTATTTATCCCCACTTATTGTTAATCCGTAAATAGTGCAGGTCAAGCATTCCAAGCCAACTTCATCATCAAGAAAACTAA
>Glyma.14g079500.1 sequence-type=CDS polypeptide=Glyma.14g079500.1.p locus=Glyma.14g079500 ID=Glyma.14g079500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGAAGAAACAAAAAGAAAAGAAAAATAGCACTAGTTGGCGCAAAACCATGGTGCTAACGGAGTTCTTCCACGCCGAGATCTCATCGGAGCTATGGAAAATGCTGGTGTCAATTTCCCGAAAAGCCCTCCGCTGCAAGTCGAGCGCCAAGAGCCTCATCTCCTACGTCCACGAGCTCCTTCCGACGATCGAAGAGATCAAGTACTCCGGCGTGGAGCTGCCGGCGCCGCGCCAGTCGCAGGTCGACCGCCTCTCGGAGATCCTCCGCTCCGGCGTCGAGCTCTCCCACCAGGCCCTCTCCTCCTCGCGCTGGAACGTCTACCGCAACTTCCAGCTCGCCAAAAAAATGGAGAAGCTCGAGAAGCACGTGACAAGGTTCTTGCAGGTTCCCATGCAGGCGCATATATTGGCGGACGTGAACCACGTGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGGCGAACCAGAGGATGGAGAAGTTTATCGGGGAGATGAAGATTGGAGTGAACGGGGGAGGGTGGGTGGAGGAGGCTGTGAGGAGTATGCAGGAGGATGAGACGTGGGTTGAAGGGTGTAATGGGAACAATAACGGTTTTGGGGTTGGGTTGGAGTTCGGGAAGAACAAGGTTATGGAGATGGTTTTTACGAGGAGTGATGTTTCTGTTGTCGGGATTTGGGGGATTGGTGGGTCCGGGAAAACCACTCTTGCTAGAGAAGTCTGCAGAGATGACCAAGTGAGATGTTATTTCAAGGAGAGGATCTTGTTTTTGACTGTGTCACAGTCCCCGAATCTGGAGCAGCTGAGAGCGAGGATCTGGGGACACGTCATGGGCAACCAAGGTTTGAATGGCACTTATGCGGTTCCACAATGGATGCCACAGTTTGAGTGTAAAGTGGAAACTCAAGTACTTGTTGTTCTGGATGATGTGTGGTCACTCCCAGTGCTGGAGCAGCTTGTGTGGAAAATTCCTGGCTGCAAATTCCTTGTGGTGTCCAGATTTAATTTCCCAACAATTTTTAATGCCACTTATCGTGTGGAGTTGCTGGGTGAACATGATGCCCTTTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATTCCAATGGGTGCTAATGTGAGTTTGGTGAAGCAGGTTGTGGCCGAGTGTGGAAGGCTTCCACTGGCTCTGAAGGTGATTGGAGCTTCTTTGCGAGACCAGAATGAAATGTTTTGGTTGAGTGTTAAAAGCAGGCTCTCTCAAGGCCAAAGCATTGGTGAATCCTATGAAATCCATCTGATTGATAGAATGGCAATTAGTACTAACTACCTGCCAGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGTTCTTTTCCTGAGGATAGAAAAATTCCTCTGGAAGTTTTAATCAATATGTGGGTTGAAATTCATGACATCAATGAAACGGAAGCATATGCCATTGTGGTTGAGCTTTCAAACAAGAATCTTCTCACCTTAGTAAAAGAAGCACGTGCCGGGGGCATGTATAGCAGTTGCTTTGAGATTTCTGTCACTCAACATGATATATTGAGGGACCTTGTTCTTCATTTGTGCAACCGTGGCAGCATTCATCAACACCGAAGGCTAGTTATGGCTAAACGAAAAGAAAATGGACTACTTCCCAAAGAATGGTCTAGATACAAGGACCAACCCTTTGAAGCACAGATTGTTTCAATCAACACAGGGGCAATGACCAAAATGGACTGGTTTGAGCTGGATTTTCCCAAGGCTGAAGTGTTGATCATTAATTTCACATCCAGTGATTACTTTTTACCTCCCTTCATCAATAAAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGCACCTCATATGCCCGCCTTCAAAATGTTTCAGTTTTTAGGAATTTGACCAACTTGAGAAGTCTCTGGCTTGAAAAGGTTTCCATCCCTCAGTTATCAGGCAGTGTCTTGCAAAACTTGGGCAAATTATTTGTAGTCCTCTGCAAAATTAACAACAGTTTGGATGGGAAACAATTCCCTAACCTCTCTGAGCTCACTCTTGATCACTGTGATGATCTAACTCAATTGCCCTCAAGCATTTGTGGAATAAAGTCACTACAAAACTTGAGTGTCACCAACTGCCACCATTTGAGTCAACTACCTGTTGAATTTGGCAAACTAAGATCACTAGAGATCCTCCGTTTATATGCTTGTCCAGATCTAGAAACACTTCCTCCTAGCATGTGTGACATGAAGAGATTGAAGTATATTGATATTTCTCAATGTGTTAACCTTTCATGCTTCCCTGAAGAGATTGGTAGATTAGTATGCTTAGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGTATTTACCAAAGTCTGCAGTGGCATTGCAATCTCTGCAGCTTGTAATTTGTGATGAGGAGGTATATGGTATGTGGAGAGATGTTGAGATGGCCAACTCAAATGTCCTTATTAAAGTAGCAGAACAACACTATGATCTAGACTGGCTTCAAGAGTGA >Glyma.14g079500.2 sequence-type=CDS polypeptide=Glyma.14g079500.2.p locus=Glyma.14g079500 ID=Glyma.14g079500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGAAGAAACAAAAAGAAAAGAAAAATAGCACTAGTTGGCGCAAAACCATGGTGCTAACGGAGTTCTTCCACGCCGAGATCTCATCGGAGCTATGGAAAATGCTGGTGTCAATTTCCCGAAAAGCCCTCCGCTGCAAGTCGAGCGCCAAGAGCCTCATCTCCTACGTCCACGAGCTCCTTCCGACGATCGAAGAGATCAAGTACTCCGGCGTGGAGCTGCCGGCGCCGCGCCAGTCGCAGGTCGACCGCCTCTCGGAGATCCTCCGCTCCGGCGTCGAGCTCTCCCACCAGGCCCTCTCCTCCTCGCGCTGGAACGTCTACCGCAACTTCCAGCTCGCCAAAAAAATGGAGAAGCTCGAGAAGCACGTGACAAGGTTCTTGCAGGTTCCCATGCAGGCGCATATATTGGCGGACGTGAACCACGTGCGGTTCGAGATGGCGGAGCGGTTCGACCGGGTGGAGGCGGCGAACCAGAGGATGGAGAAGTTTATCGGGGAGATGAAGATTGGAGTGAACGGGGGAGGGTGGGTGGAGGAGGCTGTGAGGAGTATGCAGGAGGATGAGACGTGGGTTGAAGGGTGTAATGGGAACAATAACGGTTTTGGGGTTGGGTTGGAGTTCGGGAAGAACAAGGTTATGGAGATGGTTTTTACGAGGAGTGATGTTTCTGTTGTCGGGATTTGGGGGATTGGTGGGTCCGGGAAAACCACTCTTGCTAGAGAAGTCTGCAGAGATGACCAAGTGAGATGTTATTTCAAGGAGAGGATCTTGTTTTTGACTGTGTCACAGTCCCCGAATCTGGAGCAGCTGAGAGCGAGGATCTGGGGACACGTCATGGGCAACCAAGTGCTGGAGCAGCTTGTGTGGAAAATTCCTGGCTGCAAATTCCTTGTGGTGTCCAGATTTAATTTCCCAACAATTTTTAATGCCACTTATCGTGTGGAGTTGCTGGGTGAACATGATGCCCTTTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATTCCAATGGGTGCTAATGTGAGTTTGGTGAAGCAGGTTGTGGCCGAGTGTGGAAGGCTTCCACTGGCTCTGAAGGTGATTGGAGCTTCTTTGCGAGACCAGAATGAAATGTTTTGGTTGAGTGTTAAAAGCAGGCTCTCTCAAGGCCAAAGCATTGGTGAATCCTATGAAATCCATCTGATTGATAGAATGGCAATTAGTACTAACTACCTGCCAGAAAAGATCAAGGAGTGCTTCTTGGACCTGTGTTCTTTTCCTGAGGATAGAAAAATTCCTCTGGAAGTTTTAATCAATATGTGGGTTGAAATTCATGACATCAATGAAACGGAAGCATATGCCATTGTGGTTGAGCTTTCAAACAAGAATCTTCTCACCTTAGTAAAAGAAGCACGTGCCGGGGGCATGTATAGCAGTTGCTTTGAGATTTCTGTCACTCAACATGATATATTGAGGGACCTTGTTCTTCATTTGTGCAACCGTGGCAGCATTCATCAACACCGAAGGCTAGTTATGGCTAAACGAAAAGAAAATGGACTACTTCCCAAAGAATGGTCTAGATACAAGGACCAACCCTTTGAAGCACAGATTGTTTCAATCAACACAGGGGCAATGACCAAAATGGACTGGTTTGAGCTGGATTTTCCCAAGGCTGAAGTGTTGATCATTAATTTCACATCCAGTGATTACTTTTTACCTCCCTTCATCAATAAAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGCACCTCATATGCCCGCCTTCAAAATGTTTCAGTTTTTAGGAATTTGACCAACTTGAGAAGTCTCTGGCTTGAAAAGGTTTCCATCCCTCAGTTATCAGGCAGTGTCTTGCAAAACTTGGGCAAATTATTTGTAGTCCTCTGCAAAATTAACAACAGTTTGGATGGGAAACAATTCCCTAACCTCTCTGAGCTCACTCTTGATCACTGTGATGATCTAACTCAATTGCCCTCAAGCATTTGTGGAATAAAGTCACTACAAAACTTGAGTGTCACCAACTGCCACCATTTGAGTCAACTACCTGTTGAATTTGGCAAACTAAGATCACTAGAGATCCTCCGTTTATATGCTTGTCCAGATCTAGAAACACTTCCTCCTAGCATGTGTGACATGAAGAGATTGAAGTATATTGATATTTCTCAATGTGTTAACCTTTCATGCTTCCCTGAAGAGATTGGTAGATTAGTATGCTTAGAGAAGATTGACATGAGGGAATGCCCCATGATTAGGTATTTACCAAAGTCTGCAGTGGCATTGCAATCTCTGCAGCTTGTAATTTGTGATGAGGAGGTATATGGTATGTGGAGAGATGTTGAGATGGCCAACTCAAATGTCCTTATTAAAGTAGCAGAACAACACTATGATCTAGACTGGCTTCAAGAGTGA
>Glyma.14g079500.1.p sequence-type=predicted peptide transcript=Glyma.14g079500.1 locus=Glyma.14g079500 ID=Glyma.14g079500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MKKQKEKKNSTSWRKTMVLTEFFHAEISSELWKMLVSISRKALRCKSSAKSLISYVHELLPTIEEIKYSGVELPAPRQSQVDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQVPMQAHILADVNHVRFEMAERFDRVEAANQRMEKFIGEMKIGVNGGGWVEEAVRSMQEDETWVEGCNGNNNGFGVGLEFGKNKVMEMVFTRSDVSVVGIWGIGGSGKTTLAREVCRDDQVRCYFKERILFLTVSQSPNLEQLRARIWGHVMGNQGLNGTYAVPQWMPQFECKVETQVLVVLDDVWSLPVLEQLVWKIPGCKFLVVSRFNFPTIFNATYRVELLGEHDALSLFCHHAFGQKSIPMGANVSLVKQVVAECGRLPLALKVIGASLRDQNEMFWLSVKSRLSQGQSIGESYEIHLIDRMAISTNYLPEKIKECFLDLCSFPEDRKIPLEVLINMWVEIHDINETEAYAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDILRDLVLHLCNRGSIHQHRRLVMAKRKENGLLPKEWSRYKDQPFEAQIVSINTGAMTKMDWFELDFPKAEVLIINFTSSDYFLPPFINKMPNLRALIIINYSTSYARLQNVSVFRNLTNLRSLWLEKVSIPQLSGSVLQNLGKLFVVLCKINNSLDGKQFPNLSELTLDHCDDLTQLPSSICGIKSLQNLSVTNCHHLSQLPVEFGKLRSLEILRLYACPDLETLPPSMCDMKRLKYIDISQCVNLSCFPEEIGRLVCLEKIDMRECPMIRYLPKSAVALQSLQLVICDEEVYGMWRDVEMANSNVLIKVAEQHYDLDWLQE* >Glyma.14g079500.2.p sequence-type=predicted peptide transcript=Glyma.14g079500.2 locus=Glyma.14g079500 ID=Glyma.14g079500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MKKQKEKKNSTSWRKTMVLTEFFHAEISSELWKMLVSISRKALRCKSSAKSLISYVHELLPTIEEIKYSGVELPAPRQSQVDRLSEILRSGVELSHQALSSSRWNVYRNFQLAKKMEKLEKHVTRFLQVPMQAHILADVNHVRFEMAERFDRVEAANQRMEKFIGEMKIGVNGGGWVEEAVRSMQEDETWVEGCNGNNNGFGVGLEFGKNKVMEMVFTRSDVSVVGIWGIGGSGKTTLAREVCRDDQVRCYFKERILFLTVSQSPNLEQLRARIWGHVMGNQVLEQLVWKIPGCKFLVVSRFNFPTIFNATYRVELLGEHDALSLFCHHAFGQKSIPMGANVSLVKQVVAECGRLPLALKVIGASLRDQNEMFWLSVKSRLSQGQSIGESYEIHLIDRMAISTNYLPEKIKECFLDLCSFPEDRKIPLEVLINMWVEIHDINETEAYAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDILRDLVLHLCNRGSIHQHRRLVMAKRKENGLLPKEWSRYKDQPFEAQIVSINTGAMTKMDWFELDFPKAEVLIINFTSSDYFLPPFINKMPNLRALIIINYSTSYARLQNVSVFRNLTNLRSLWLEKVSIPQLSGSVLQNLGKLFVVLCKINNSLDGKQFPNLSELTLDHCDDLTQLPSSICGIKSLQNLSVTNCHHLSQLPVEFGKLRSLEILRLYACPDLETLPPSMCDMKRLKYIDISQCVNLSCFPEEIGRLVCLEKIDMRECPMIRYLPKSAVALQSLQLVICDEEVYGMWRDVEMANSNVLIKVAEQHYDLDWLQE*
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