SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.14g074300

Feature Type:gene_model
Chromosome:Gm14
Start:6223805
stop:6226038
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g074300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G19440.1AT 3-ketoacyl-CoA synthase 4 JGI N/AIEA
GO:0006633GO-bp fatty acid biosynthetic process EnsemblGenomesN/AIEA
GO:0006633GO-bp fatty acid biosynthetic process JGI N/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008610GO-bp lipid biosynthetic process JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
GO:0016746GO-mf transferase activity, transferring acyl groups EnsemblGenomesN/AIEA
GO:0016746GO-mf transferase activity, transferring acyl groups JGI N/AIEA
GO:0016747GO-mf transferase activity, transferring acyl groups other than amino-acyl groups EnsemblGenomesN/AIEA
GO:0016747GO-mf transferase activity, transferring acyl groups other than amino-acyl groups JGI N/AIEA
PF08392PFAM FAE1/Type III polyketide synthase-like protein JGI N/AIEA
PF08541PFAM 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JGI N/AIEA
PWY-5080SoyCyc9 very long chain fatty acid biosynthesis I Plant Metabolic Network ISS
GN7V-58061SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Proteins Associated with Glyma.14g074300
LocusGene SymbolProtein Name
DDKCS 3-ketoacyl-CoA synthase 4-like

Expression Patterns of Glyma.14g074300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.14g074300
ParalogEvidenceComments
Glyma.17g251000 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g074300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g08080 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g074300
>Glyma.14g074300.1 sequence-type=CDS polypeptide=Glyma.14g074300.1.p locus=Glyma.14g074300 ID=Glyma.14g074300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACAGTGACGATGAGTGGAGAAGAAGAAGCTGCGGTGGGAGTTCAGATCCAACAGAAGAGCAGAATGGTGCTCCCAGATTTCCTCCAGAGCGTGAATCTCAAGTACGTGAAATTAGGTTACCACTACTTGATCTCCAACCTCGTTACCCTATTCCTGGTCCCTTTGATCCTCGTCACGCTAATCCAGGTCTCTCAGACCACCGACCTCCGCCACCTCTGGCTCCACCTCCAGTACAACCTCCTCACCATCCTCACCTGCTCCGCCGTCCTCGTCTTCGGCCTCACCCTCTACGCCGTCACCTGCCCACGCCCCGTCTACCTCCTCGACTCCGCCTGCTTCCGCCCCGCCGACCACCTCAAGGCCCCCTTCCGGAGCTTCATGGATCACTCCCGCCTCACGGGAGACTTCGAGGAGTCCTCCCTGGAGTTCCAGCGGAAGATCCTCGAACGCTCTGGCCTCGGGGAGGAAACCTACGTCCCCGACGCCATGCACTCTATTCCGCCCCAGCCCTCCATGGCCGCTGCCAGGGCCGAGGCGGAACAGGTCATGTTTGGTGCCTTGGACAACCTCTTCCAAAGCACCAACATAAAACCAAAGGATATTGGTATCCTTATTGTGAATTGCAGCTTGTTTAACCCTACCCCCTCACTGTCTTCCATGATTGTTAACAAGTACAAATTAAGGGGTAACATTAGGAGCTTTAATTTGGGAGGGATGGGGTGCAGTGCTGGAGTCATTGCTGTTGATCTTGCTAAGGACCTTTTGCAGGTCCATAGGAACACATATGCTGTGGTTGTTAGCACTGAGAACATTACTCAGAATTGGTACTTTGGGAACAAGAAATCCATGCTCATTCCCAATTGCCTTTTTCGCGTTGGCTGCTCCGTGCTGCTGCTCTCCAACAAGCCGGCGGATCGAAGGAGGGCAAAGTACCGGCTTGTCCATGTTGTGAGGACTCATCGCGGTGCGGACGACAAGGCATTCCGGTGTGTTTACCAGGAGCAGGATGATGCAGGGAAGACTGGTGTTTCCTTGTCTAAGGATTTGATGGCAATTGCTGGTGGAGCATTGAAGACCAACATCACAACACTTGGCCCTTTGGTGCTGCCAATTAGTGAGCAGCTTCTGTTTTTCGTGACTCTGCTGATGAAGAAGTTGTTTAAGGCTGATGTGAAGCCTTACATACCGGATTTCAAGCTTGCTTTTGATCATTTCTGCATCCATGCCGGGGGCAGGGCCGTGATTGATGAGTTGGAGAAGAACCTGCAGCTGCTTCCTGAGCATGTGGAGGCTTCTAGAATGACCCTTCATAGATTTGGGAACACTTCCTCAAGCTCCATTTGGTATGAGTTGGCTTACATTGAAGCCAAAGGGAGGATCAAGAAGGGTAACAGGATTTGGCAAATTGCTTTTGGGAGTGGTTTCAAATGTAACAGTGCGGTTTGGCAGGCTCTGAGAAATGTGAGGCCTTCTCCTAATGGACCATGGGAAGATTGCATTGATAAGTATCCTGTGGAAATAGTCTCATAG
Predicted protein sequences of Glyma.14g074300
>Glyma.14g074300.1.p sequence-type=predicted peptide transcript=Glyma.14g074300.1 locus=Glyma.14g074300 ID=Glyma.14g074300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTVTMSGEEEAAVGVQIQQKSRMVLPDFLQSVNLKYVKLGYHYLISNLVTLFLVPLILVTLIQVSQTTDLRHLWLHLQYNLLTILTCSAVLVFGLTLYAVTCPRPVYLLDSACFRPADHLKAPFRSFMDHSRLTGDFEESSLEFQRKILERSGLGEETYVPDAMHSIPPQPSMAAARAEAEQVMFGALDNLFQSTNIKPKDIGILIVNCSLFNPTPSLSSMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSVLLLSNKPADRRRAKYRLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFVTLLMKKLFKADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRIKKGNRIWQIAFGSGFKCNSAVWQALRNVRPSPNGPWEDCIDKYPVEIVS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo