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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G42810.1 | AT | inositol-pentakisphosphate 2-kinase 1 | JGI | N/A | IEA |
| GO:0016310 | GO-bp | phosphorylation | EnsemblGenomes | N/A | IEA |
| GO:0032958 | GO-bp | inositol phosphate biosynthetic process | EnsemblGenomes | N/A | IEA |
| GO:0052746 | GO-bp | inositol phosphorylation | EnsemblGenomes | N/A | IEA |
| GO:0005634 | GO-cc | nucleus | EnsemblGenomes | N/A | IEA |
| GO:0000166 | GO-mf | nucleotide binding | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | JGI | N/A | IEA |
| GO:0016301 | GO-mf | kinase activity | EnsemblGenomes | N/A | IEA |
| GO:0016740 | GO-mf | transferase activity | EnsemblGenomes | N/A | IEA |
| GO:0035299 | GO-mf | inositol pentakisphosphate 2-kinase activity | EnsemblGenomes | N/A | IEA |
| GO:0035299 | GO-mf | inositol pentakisphosphate 2-kinase activity | JGI | N/A | IEA |
| KOG4749 | KOG | Inositol polyphosphate kinase | JGI | N/A | IEA |
| PTHR14456 | Panther | INOSITOL POLYPHOSPHATE KINASE 1 | JGI | N/A | IEA |
| PTHR14456:SF6 | Panther | JGI | N/A | IEA | |
| PF06090 | PFAM | Inositol-pentakisphosphate 2-kinase | JGI | N/A | IEA |
| PWY-4541 | SoyCyc9 | lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) | Plant Metabolic Network | ISS | |
| PWY-4562 | SoyCyc9 | lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) | Plant Metabolic Network | ISS | |
| PWY-4661 | SoyCyc9 | 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) | Plant Metabolic Network | ISS | |
| PWY-4765 | SoyCyc9 | superpathway of lipid-dependent phytate biosynthesis | Plant Metabolic Network | ISS | |
| PWY-6369 | SoyCyc9 | inositol pyrophosphates biosynthesis | Plant Metabolic Network | ISS | |
| PWY-6554 | SoyCyc9 | 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3) | Plant Metabolic Network | ISS | |
| GN7V-59817 | SoyCyc9-rxn | Enzyme name not determined | Plant Metabolic Network | ISS |
| Locus | Gene Symbol | Protein Name |
|---|---|---|
| IPK1 | inositol pentakisphosphate 2-kinase |
|
Glyma.14g072200 not represented in the dataset |
Glyma.14g072200 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma14g07880 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.14g072200.1 sequence-type=CDS polypeptide=Glyma.14g072200.1.p locus=Glyma.14g072200 ID=Glyma.14g072200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCATTGACTTTGAAAGAGGAAGACGCAGCTGACTGGGTTTACAGAGGGGAAGGAGCAGTTAATCTTGTGCTCGCTTACGCTGGATCCTCACCTTCTTTTATTGGGAAAGTGGTCCGCATACGTAAGGCTCCAAGGAATGGATCGCAGTCAAAGAGTGTGAGTGTGAGGAATAGCATAGCTTTGACTCCACATGAACGTGTTCTCTGGAAAGATGTGCATCAACTTATCTCCTCTTCAGACAAGGAAATAGTTGGTCAACTATATGTGCAGCATGTTATGAAGCCTTTGCTTGGTTCCAACTCTGTTGATGCTGGGATGCACGTCCTGGTGACCAGGGAATTCCTTGAGTTGGTTGAGAAGAATGTTTCTGGTCAACGTCCTGCGTGGCGAGTTGAAGCTGCCAGGGTTGATGCACATTGTGATTTTGGCCTTCTCATGTCAGATCATTCTCTCTTTGCTTATGGCAGTCAAGGATCTAGCCTCTGCTTATCTGTTGAGATAAAGCCCAAATGCGGATTTCTTCCTCTTTCAAGATTCATATCTGAAGTAAATGCTATCAAAAGGAGAATAACCCGATTTGAAATGCACCAAACTCTGAAATTGCTTCAAGGAGAGATATCGCAACTAAGTGAGTACAATCCACTTGATCTGTTCTCTGGATCCAAGGAAAGAATTCTGAAAGCTATTAAAGGTCTCCTTACAACTCCTCAAAACAATTTTCGTGTATTTTTGAATGGCTCTCTCATACTTGGAGGACTGGGAGGTGTTGCAAAAAATACAGATGTTTGTATTGCTAAAGCATTTGAAGATGAACTTAAGTCAATCATTCGAGCTGATGATGATCTATGTACAAATAACTTATCTACTCTTGTTACTGAGGCTTTGCAAAAATCAGGAGTCCTTGATAAGCTCCTGAAGGTGCAGAAGCTTGATAATATTGACATAGAAGGGGTCATCCATGCATATTATAACATTACTTCTCAACAGTGCATGGTGTGTAAGGAATTGAGTGAAGAACAGGCAAAAATATATACCCCTTTGCATTCAGCTTCACTGGATGAAAGTTTGAGAATTGTAAAGGACTACCTGATAGCAACAACTGCAAAAGACTGCAGTTTGATGTTGTGTTTTAGACCAAGGAATGAGGAGGATTCTGGATCTGTGTACGATAATGTATATCTGGACTCAACGGAGCAATCCTTTGATTATAAGGTGTATTTTATCGACCTTGATTTAAAGCGCTTAAGTAAAGTGGAAGACTACTATGAATTAGATAAGAAGATAGTGAACTGCTACAGACAAATCATCAAAATGGATCAAGGAAGAAATGAAGAGACAGGCTTGAAGGCATCTAATGCTGCATATTGA
>Glyma.14g072200.1.p sequence-type=predicted peptide transcript=Glyma.14g072200.1 locus=Glyma.14g072200 ID=Glyma.14g072200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MALTLKEEDAADWVYRGEGAVNLVLAYAGSSPSFIGKVVRIRKAPRNGSQSKSVSVRNSIALTPHERVLWKDVHQLISSSDKEIVGQLYVQHVMKPLLGSNSVDAGMHVLVTREFLELVEKNVSGQRPAWRVEAARVDAHCDFGLLMSDHSLFAYGSQGSSLCLSVEIKPKCGFLPLSRFISEVNAIKRRITRFEMHQTLKLLQGEISQLSEYNPLDLFSGSKERILKAIKGLLTTPQNNFRVFLNGSLILGGLGGVAKNTDVCIAKAFEDELKSIIRADDDLCTNNLSTLVTEALQKSGVLDKLLKVQKLDNIDIEGVIHAYYNITSQQCMVCKELSEEQAKIYTPLHSASLDESLRIVKDYLIATTAKDCSLMLCFRPRNEEDSGSVYDNVYLDSTEQSFDYKVYFIDLDLKRLSKVEDYYELDKKIVNCYRQIIKMDQGRNEETGLKASNAAY*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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