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Report for Sequence Feature Glyma.14g065800

Feature Type:gene_model
Chromosome:Gm14
Start:5403689
stop:5407864
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g065800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G56740.1AT histone acetyltransferase of the GNAT family 2 JGI N/AIEA
GO:0006325GO-bp chromatin organization EnsemblGenomesN/AIEA
GO:0006348GO-bp chromatin silencing at telomere EnsemblGenomesN/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0016573GO-bp histone acetylation EnsemblGenomesN/AIEA
GO:0043967GO-bp histone H4 acetylation EnsemblGenomesN/AIEA
GO:0000781GO-cc chromosome, telomeric region EnsemblGenomesN/AIEA
GO:0000790GO-cc nuclear chromatin EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0004402GO-mf histone acetyltransferase activity EnsemblGenomesN/AIEA
GO:0004402GO-mf histone acetyltransferase activity JGI N/AIEA
GO:0008080GO-mf N-acetyltransferase activity JGI N/AIEA
GO:0010485GO-mf H4 histone acetyltransferase activity EnsemblGenomesN/AIEA
GO:0016747GO-mf transferase activity, transferring acyl groups other than amino-acyl groups JGI N/AIEA
GO:0042393GO-mf histone binding EnsemblGenomesN/AIEA
KOG2696 KOG Histone acetyltransferase type b catalytic subunit JGI N/AIEA
PTHR12046Panther HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT JGI N/AIEA
PF01853PFAM MOZ/SAS family JGI N/AIEA
PF10394PFAM Histone acetyl transferase HAT1 N-terminus JGI N/AIEA

Expression Patterns of Glyma.14g065800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.14g065800
ParalogEvidenceComments
Glyma.02g250900 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g065800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g07140 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.14g065800
>Glyma.14g065800.1 sequence-type=CDS polypeptide=Glyma.14g065800.1.p locus=Glyma.14g065800 ID=Glyma.14g065800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGCAGAAGCAGCGTTCGAGTTCCGATGCCGACAACGAAGTCAAGAAACGACGCCGTGTTGGTTTCTCAGGCGTTGATTCTGGAGTTGAGGCCAAAGACTGCATCACAATCTATCTAGTTTCAAGCAAGGAAGAATTCGATGCTCCAGAGAGTTTTGTCATTCATCCTGTGGATCTGAATAGCTTTTTTGATGATGATGGGAAAATTTATGGCTATGAGGGTTTGAAGATTACCATCTGGGTTAGCAGCATATCATTTTATGCATATGCTGATATTACATTCCAGAGTTCATCTGATCGAGGCAAAGGGGTCACAGATTTGAAATCTGCTCTTCAGACAATTTTTGCTGAGACTCTTGTTGATAGCAAGGATGAATTCCTTCAGAAATATTTGGTGGATAACGACTTTGTTAGAACAAACATCTCAAATGGAGAAGCTTTGAAGCACAAAGCTTTCCAGGGGAACATTTCTGATTATAATCCACATACAGATTCATCTACTTCTACTGTTGAGGTTGTCCGTTTGGTGGCAGGCAACATGACTACTGGACAACTTTACAGTCATCTAATACCCCTCACACTACTTCTCGTTGATGGTAGCAGTCCTATTGATGTTACTGATTCACAGTGGGAGCTGTATGTTTTGTGTCAGAAGAAAACTGATCCGCAGGGAGAGATCCAATGTAGGTTGATTGGTTTTACTGCTGTTTATCGATTTTATCACTATCCTGATGATTCCCGATTACGACTAAGCCAGATACTGGTATTACCTCCTTACCAGCACAAGGGTTATGGTCGATTCCTTCTAGAGGTGCTATATGATGTTGCTATATCTGAAAATGTTTTTGACTTCACGGTAGAAGAGCCATTAGATCACTTCCAACATGTTCGTACTTGTGTTGACTCACTTCGCCTGCTTCAGTTTTACCCAATTCAGAATATAGTTACTAAAGCTGTTTCACTTCTGAAGCAAGGAAAGTTATCAAAGAAAGCAAATTGTCCTCGACTTTTGCCACCTCCCAGCGCAATTGAGGATGTTAGGAAAAGTCTGAAAATTAACAAGCAGCAGTTTCTCCAGTGTTGGGAGGTTTTGATCTACATTGGCCTTAATCCTGTTGACAAGAACACGGAGAACTTTGTTAGTATTATTTTGAACCGTGTTAAGTATGATATCTTAGGGAAAGATTCTGGGACGTCTGGGAAGCAGCTTATTGAAGTACCAAGTGATGTTGATCAGGAGATGTCATTTGTCATGTTCAGATCAGAAGCCAACGAAGCTAGTAGTGTGCAAATGGATGACAATCAGGCTAATCAAGAAGAGCAACTCCAGAGGTTAGTTCAGGAAAGGGTGAAAGAAATTCAGTTGATTGCGGAAAAGGTAACCCTGCATCTTGGGAGCTCAGGGGTGGTGGTTAATTAG
Predicted protein sequences of Glyma.14g065800
>Glyma.14g065800.1.p sequence-type=predicted peptide transcript=Glyma.14g065800.1 locus=Glyma.14g065800 ID=Glyma.14g065800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGQKQRSSSDADNEVKKRRRVGFSGVDSGVEAKDCITIYLVSSKEEFDAPESFVIHPVDLNSFFDDDGKIYGYEGLKITIWVSSISFYAYADITFQSSSDRGKGVTDLKSALQTIFAETLVDSKDEFLQKYLVDNDFVRTNISNGEALKHKAFQGNISDYNPHTDSSTSTVEVVRLVAGNMTTGQLYSHLIPLTLLLVDGSSPIDVTDSQWELYVLCQKKTDPQGEIQCRLIGFTAVYRFYHYPDDSRLRLSQILVLPPYQHKGYGRFLLEVLYDVAISENVFDFTVEEPLDHFQHVRTCVDSLRLLQFYPIQNIVTKAVSLLKQGKLSKKANCPRLLPPPSAIEDVRKSLKINKQQFLQCWEVLIYIGLNPVDKNTENFVSIILNRVKYDILGKDSGTSGKQLIEVPSDVDQEMSFVMFRSEANEASSVQMDDNQANQEEQLQRLVQERVKEIQLIAEKVTLHLGSSGVVVN*






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