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Report for Sequence Feature Glyma.14g046200

Feature Type:gene_model
Chromosome:Gm14
Start:3515948
stop:3520547
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g046200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G21630.1AT chitin elicitor receptor kinase 1 JGI N/AIEA
GO:0006468GO-bp protein phosphorylation EnsemblGenomesN/AIEA
GO:0006468GO-bp protein phosphorylation JGI N/AIEA
GO:0007166GO-bp cell surface receptor signaling pathway EnsemblGenomesN/AIEA
GO:0007178GO-bp transmembrane receptor protein serine/threonine kinase signaling pathway EnsemblGenomesN/AIEA
GO:0005886GO-cc plasma membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity JGI N/AIEA
GO:0004674GO-mf protein serine/threonine kinase activity EnsemblGenomesN/AIEA
GO:0004675GO-mf transmembrane receptor protein serine/threonine kinase activity EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
KOG1187 KOG Serine/threonine protein kinase JGI N/AIEA
PTHR24420Panther LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE JGI N/AIEA
PTHR24420:SF421Panther JGI N/AIEA
PF07714PFAM Protein tyrosine kinase JGI N/AIEA

Proteins Associated with Glyma.14g046200
LocusGene SymbolProtein Name
NFR1B LysM-type receptor kinase NFR1B

Expression Patterns of Glyma.14g046200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.14g046200
ParalogEvidenceComments
Glyma.02g270800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g046200 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g05060 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.14g046200
>Glyma.14g046200.2 sequence-type=transcript locus=Glyma.14g046200 ID=Glyma.14g046200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CAGGTCTTGCTACGAGTGCTTCAGTTGGAATACCTATAGCAGGAATATGCGTTCTTCTATTAGTAATTTGCATATATGTCAAGTACTTCCAGAAGAAGGAAGGAGAGAAAGCTAAATTGGCAACAGAAAATTCTATGGCGTTTTCAACTCAAGATGTCTCTGGAAGTGCAGAATATGAAACTTCAGGATCCAGTGGGACTGCTAGTACTAGTGCTACTGGCCTTACAGGCATTATGGTGGCAAAATCAATGGAGTTCTCATATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTTGGAGAATAAAATTGGTCAAGGTGGATTTGGAATTGTCTATTATGCAGAACTGAGAGGCGAGAAAACTGCAATCAAGAAGATGGACGTGCAAGCATCAACAGAATTTCTTTGCGAGTTGAAGGTCTTAACTCATGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGTGTTGAGGGGTCTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGGAAAGATCCTTTCCTATGGTCTAGCCGAGTGCAAATTGCACTAGATTCAGCAAGAGGCCTTGAATATATTCACGAGCACACTGTGCCAGTGTATATCCATCGTGATGTAAAATCTGCAAATATATTAATAGACAAAAACTTCCGTGGAAAGGTTGCAGATTTTGGTTTGACCAAACTTATTGAAGTTGGAGGTTCCACACTTCAAACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGACATTTCTCCAAAAGTAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTGTCCTAAAGACAGTAGAATCTGTTGCTGAATCAAAGGGCCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAGAGTAATCCTTCAGAAAGTATTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATCGATTCAGTTCTCAAGATTGCTCAACTTGGGAGAGCTTGTACAAGAGATAACCCACTACTACGCCCGAGTATGAGGTCTATAGTTGTTGCTCTCTTGACACTTTCATCACCTACTGAGGATTGCTATGATGACACTTCCTACGAAAATCAGACTCTCATAAATCTACTGTCTGTGAGATGAAGGTTCTTTGTGACAATTACACCATGTTTTTAATGACTTTTGGAAGCACTTTATGTAAGGTCTGAAAAGTTTGTACATGAATGGAGTTGAGATTTTTGTAAATGAGTTTTGTTCAATTTTCTTCTATCTGATTTGGAAACACCTGTTGTTCTGACTCCTAATAGAAGTTTTTATTTATCAGCGAATATTAATTTGTTGGGatgttagttttctgagaagagaagatcg
Coding sequences of Glyma.14g046200
>Glyma.14g046200.1 sequence-type=CDS polypeptide=Glyma.14g046200.1.p locus=Glyma.14g046200 ID=Glyma.14g046200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAACTCAAAAAATGGTTACTGTTCTTTTTGTTGCTGGAGTATGTTTGTTGCAATGCGGAGTCTAAGTGTGTGAAGGGATGTGATGTAGCTTTAGCTTCATACTATGTTAGTCCAGGGTATTTACTCTTGGAAAATATAACGCGCTTGATGGAATCAATTGTTCTGTCCAATTCTGATGTTATAATCTACAACAAAGACAAAATATTCAATGAAAATGTGCTAGCATTTTCCAGACTCAATATTCCATTCCCCTGTGGCTGTATCGATGGTGAGTTTCTGGGGCATGTGTTTGAGTACTCAGCTTCTGCAGGTGACACCTATGATTCGATTGCGAAAGTGACATATGCCAATCTCACCACTGTTGAGCTTTTGCGGAGGTTCAACAGTTATGATCAAAATGGTATACCTGCAAATGCCACGGTTAATGTCACGGTCAATTGTTCTTGTGGGAACAGCCAGGTTTCAAAAGATTATGGGCTGTTTATTACCTATCTACTCAGGCCTGGGAATAATTTGCATGATATTGCCAACGAGGCTCGCCTTGATGCACAGTTGCTACAGAGTTACAATCCTGGTGTCAATTTCAGCAAAGAGAGTGGGGATATTGTTTTCATTCCAGGAAAAGGTCTTGCTACGAGTGCTTCAGTTGGAATACCTATAGCAGGAATATGCGTTCTTCTATTAGTAATTTGCATATATGTCAAGTACTTCCAGAAGAAGGAAGGAGAGAAAGCTAAATTGGCAACAGAAAATTCTATGGCGTTTTCAACTCAAGATGTCTCTGGAAGTGCAGAATATGAAACTTCAGGATCCAGTGGGACTGCTAGTACTAGTGCTACTGGCCTTACAGGCATTATGGTGGCAAAATCAATGGAGTTCTCATATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTTGGAGAATAAAATTGGTCAAGGTGGATTTGGAATTGTCTATTATGCAGAACTGAGAGGCGAGAAAACTGCAATCAAGAAGATGGACGTGCAAGCATCAACAGAATTTCTTTGCGAGTTGAAGGTCTTAACTCATGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGTGTTGAGGGGTCTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGGAAAGATCCTTTCCTATGGTCTAGCCGAGTGCAAATTGCACTAGATTCAGCAAGAGGCCTTGAATATATTCACGAGCACACTGTGCCAGTGTATATCCATCGTGATGTAAAATCTGCAAATATATTAATAGACAAAAACTTCCGTGGAAAGGTTGCAGATTTTGGTTTGACCAAACTTATTGAAGTTGGAGGTTCCACACTTCAAACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGACATTTCTCCAAAAGTAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTGTCCTAAAGACAGTAGAATCTGTTGCTGAATCAAAGGGCCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAGAGTAATCCTTCAGAAAGTATTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATCGATTCAGTTCTCAAGATTGCTCAACTTGGGAGAGCTTGTACAAGAGATAACCCACTACTACGCCCGAGTATGAGGTCTATAGTTGTTGCTCTCTTGACACTTTCATCACCTACTGAGGATTGCTATGATGACACTTCCTACGAAAATCAGACTCTCATAAATCTACTGTCTGTGAGATGA

>Glyma.14g046200.2 sequence-type=CDS polypeptide=Glyma.14g046200.2.p locus=Glyma.14g046200 ID=Glyma.14g046200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGTTTTCAACTCAAGATGTCTCTGGAAGTGCAGAATATGAAACTTCAGGATCCAGTGGGACTGCTAGTACTAGTGCTACTGGCCTTACAGGCATTATGGTGGCAAAATCAATGGAGTTCTCATATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTTGGAGAATAAAATTGGTCAAGGTGGATTTGGAATTGTCTATTATGCAGAACTGAGAGGCGAGAAAACTGCAATCAAGAAGATGGACGTGCAAGCATCAACAGAATTTCTTTGCGAGTTGAAGGTCTTAACTCATGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGTGTTGAGGGGTCTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGGAAAGATCCTTTCCTATGGTCTAGCCGAGTGCAAATTGCACTAGATTCAGCAAGAGGCCTTGAATATATTCACGAGCACACTGTGCCAGTGTATATCCATCGTGATGTAAAATCTGCAAATATATTAATAGACAAAAACTTCCGTGGAAAGGTTGCAGATTTTGGTTTGACCAAACTTATTGAAGTTGGAGGTTCCACACTTCAAACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGACATTTCTCCAAAAGTAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTGTCCTAAAGACAGTAGAATCTGTTGCTGAATCAAAGGGCCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAGAGTAATCCTTCAGAAAGTATTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATCGATTCAGTTCTCAAGATTGCTCAACTTGGGAGAGCTTGTACAAGAGATAACCCACTACTACGCCCGAGTATGAGGTCTATAGTTGTTGCTCTCTTGACACTTTCATCACCTACTGAGGATTGCTATGATGACACTTCCTACGAAAATCAGACTCTCATAAATCTACTGTCTGTGAGATGA
Predicted protein sequences of Glyma.14g046200
>Glyma.14g046200.1.p sequence-type=predicted peptide transcript=Glyma.14g046200.1 locus=Glyma.14g046200 ID=Glyma.14g046200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MELKKWLLFFLLLEYVCCNAESKCVKGCDVALASYYVSPGYLLLENITRLMESIVLSNSDVIIYNKDKIFNENVLAFSRLNIPFPCGCIDGEFLGHVFEYSASAGDTYDSIAKVTYANLTTVELLRRFNSYDQNGIPANATVNVTVNCSCGNSQVSKDYGLFITYLLRPGNNLHDIANEARLDAQLLQSYNPGVNFSKESGDIVFIPGKGLATSASVGIPIAGICVLLLVICIYVKYFQKKEGEKAKLATENSMAFSTQDVSGSAEYETSGSSGTASTSATGLTGIMVAKSMEFSYQELAKATNNFSLENKIGQGGFGIVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPFLWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLIEVGGSTLQTRLVGTFGYMPPEYAQYGDISPKVDVYAFGVVLYELISAKNAVLKTVESVAESKGLVALFEEALNQSNPSESIRKLVDPRLGENYPIDSVLKIAQLGRACTRDNPLLRPSMRSIVVALLTLSSPTEDCYDDTSYENQTLINLLSVR*

>Glyma.14g046200.2.p sequence-type=predicted peptide transcript=Glyma.14g046200.2 locus=Glyma.14g046200 ID=Glyma.14g046200.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAFSTQDVSGSAEYETSGSSGTASTSATGLTGIMVAKSMEFSYQELAKATNNFSLENKIGQGGFGIVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPFLWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLIEVGGSTLQTRLVGTFGYMPPEYAQYGDISPKVDVYAFGVVLYELISAKNAVLKTVESVAESKGLVALFEEALNQSNPSESIRKLVDPRLGENYPIDSVLKIAQLGRACTRDNPLLRPSMRSIVVALLTLSSPTEDCYDDTSYENQTLINLLSVR*






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