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Report for Sequence Feature Glyma.14g019100

Feature Type:gene_model
Chromosome:Gm14
Start:1370340
stop:1375020
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g019100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G55130.1AT co-factor for nitrate, reductase and xanthine dehydrogenase 5 JGI N/AIEA
GO:0002098GO-bp tRNA wobble uridine modification EnsemblGenomesN/AIEA
GO:0002143GO-bp tRNA wobble position uridine thiolation EnsemblGenomesN/AIEA
GO:0006777GO-bp Mo-molybdopterin cofactor biosynthetic process EnsemblGenomesN/AIEA
GO:0008033GO-bp tRNA processing EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0018192GO-bp enzyme active site formation via cysteine modification to L-cysteine persulfide EnsemblGenomesN/AIEA
GO:0034227GO-bp tRNA thio-modification EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0004792GO-mf thiosulfate sulfurtransferase activity EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0008641GO-mf ubiquitin-like modifier activating enzyme activity EnsemblGenomesN/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
GO:0016779GO-mf nucleotidyltransferase activity EnsemblGenomesN/AIEA
GO:0016783GO-mf sulfurtransferase activity EnsemblGenomesN/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
GO:0061604GO-mf molybdopterin-synthase sulfurtransferase activity EnsemblGenomesN/AIEA
GO:0061605GO-mf molybdopterin-synthase adenylyltransferase activity EnsemblGenomesN/AIEA
KOG2017 KOG Molybdopterin synthase sulfurylase JGI N/AIEA
PTHR10953Panther UBIQUITIN-ACTIVATING ENZYME E1 JGI N/AIEA
PTHR10953:SF79Panther JGI N/AIEA
PF00581PFAM Rhodanese-like domain JGI N/AIEA
PF00899PFAM ThiF family JGI N/AIEA
PF05237PFAM MoeZ/MoeB domain JGI N/AIEA
PWY-6823SoyCyc9 molybdenum cofactor biosynthesis Plant Metabolic Network ISS
GN7V-56413SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Expression Patterns of Glyma.14g019100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g019100 not represented in the dataset
Glyma.14g019100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.14g019100
ParalogEvidenceComments
Glyma.02g293600 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g019100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g02260 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.14g019100
>Glyma.14g019100.2 sequence-type=transcript locus=Glyma.14g019100 ID=Glyma.14g019100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATATCAATTCGAAGCACATTTGTTTTGTTGCAAGAGAAACAGTAATGTTGGACTAGAAAGTGGAAAACCCTGGTTTAGATTGGTGTTGGGCTTTTGCGCAGGAACATAGTCAACACTCAACATAGGATAGATAGTTTGTTCGTTGCGTTGCCATGTCGGCGTCGGAGATTCTTCGGGAACTGGATTCGCTGAAGGACGAAAAGACCAAAATTGAGCACAAAATCTCTGCGCTTGAAGCTCAACTCAGAGAGATTAATCTCCAAAACGACGCCGCACCTCCCAATGCTTCTTCTTCTTCATCGTACCCCACCAACGGATTGACCCAGGACATGATTCACAGATACAGTCGCCACCTTGTGCTCCCTTCCTTTGGTGTTCAAGGGCAGGCAAATCTATTGAAGTCGTCAATCTTAGTTGTGGGAGCTGGAGGTTTGGGTGCACCTGCATTGTTATACTTTGCAGCTTCTGGTGTTGGTAACATGGCGCTTGGGTGTTATTGACCATGACGTGGTTGAGCTGAATAATATGCATAGGCAGGTTATCCACACCGAAGCATATGTTGGTAAGCCAAAAGTGAAATCTGCCGCTGCTGCTTGTTGCTCGATCAACTCCACTATTCAAGTTGTGGAACATGAAGAAGCTTTGCAGACTTCCAACGCTTTGGAAATTCTCAGCAAATATGATATAATAGTAGATGCAACAGATAATGCTCCTACCCGATACTTGATCAGTGATTGCTGTGTGGTTCTAGGAAAGCCTCTTGTATCAGGTGCTGCACTGGGATTGGAAGGGCAGCTTACTGTCTACAATTACAATGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTAGAACAGCATGCCAAAGTTGTGCTGAGGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTTGAGGCTATTAAGATTGCAGCTTCTGTTGGTGAGCCACTCTCAGGAAGGATGCTTCTCTTGGATGCATTGTCTGGACGGATTCGTATTGTCAAAATTAGAGGAAGGTCTATGCAGTGTGAAGCTTGTGGAGAAAATGCAACATTTACCCAACAGCAATTCCGAGAATTTGATTATGAGAAGTTCACTCAGACTCCCTTGCGTGTGCCTCCTTTGAAGTTAAATCTACTTCCCAGAGAATCAAGAATCAGCAGCAAGGAGTACAGTGAAGTAATTATTAAGAAGGGACCTCATGTGCTGGTTGATGTTAGACCAGCACACCATTTCAAGATTGCATCTCTACCAAAGTCTCTGAACATTCCACTCTCAACATTAGAGGCTAGGCTGCCTGAAGTATCATCAGCTTTGAAGAAAGAGGAAGAGGAAAGTGGTGCAGTTTCTGGGTCAAGTGCACAATTGTATGTAGTATGTAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTATCTTCACAAAATGGGTTTCACTTCTGCCAAGGATATTGTTGGTGGCTTAGAATCTTGGGCCCACAATGTGGACCATCAGTTCCCTACATATTAGCTGACACCTCTAGCTATGTTAAATATCACTTTCATTAAGTAGTTATACTGCTTGTTTAAAATTATTTCTCTTATTAGTGACGCTGCTTTCATTTTTCCATGTCTATTTACAACATTCACGTGACTTTATTTTTTTTAGTCTTAATTCATTTTATTCTTGTTTTTCTTTGCTTTGGGTAGAGTTTAAAAAACCACTGGTTATTCGCGTTGTTGCTACAGTGCCAATAATAGTTACTTTCCATTTCTTTCATCAAATGATGTTTGCT
Coding sequences of Glyma.14g019100
>Glyma.14g019100.1 sequence-type=CDS polypeptide=Glyma.14g019100.1.p locus=Glyma.14g019100 ID=Glyma.14g019100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGGCGTCGGAGATTCTTCGGGAACTGGATTCGCTGAAGGACGAAAAGACCAAAATTGAGCACAAAATCTCTGCGCTTGAAGCTCAACTCAGAGAGATTAATCTCCAAAACGACGCCGCACCTCCCAATGCTTCTTCTTCTTCATCGTACCCCACCAACGGATTGACCCAGGACATGATTCACAGATACAGTCGCCACCTTGTGCTCCCTTCCTTTGGTGTTCAAGGGCAGGCAAATCTATTGAAGTCGTCAATCTTAGTTGTGGGAGCTGGAGGTTTGGGTGCACCTGCATTGTTATACTTTGCAGCTTCTGGTGTTGGGCGCTTGGGTGTTATTGACCATGACGTGGTTGAGCTGAATAATATGCATAGGCAGGTTATCCACACCGAAGCATATGTTGGTAAGCCAAAAGTGAAATCTGCCGCTGCTGCTTGTTGCTCGATCAACTCCACTATTCAAGTTGTGGAACATGAAGAAGCTTTGCAGACTTCCAACGCTTTGGAAATTCTCAGCAAATATGATATAATAGTAGATGCAACAGATAATGCTCCTACCCGATACTTGATCAGTGATTGCTGTGTGGTTCTAGGAAAGCCTCTTGTATCAGGTGCTGCACTGGGATTGGAAGGGCAGCTTACTGTCTACAATTACAATGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTAGAACAGCATGCCAAAGTTGTGCTGAGGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTTGAGGCTATTAAGATTGCAGCTTCTGTTGGTGAGCCACTCTCAGGAAGGATGCTTCTCTTGGATGCATTGTCTGGACGGATTCGTATTGTCAAAATTAGAGGAAGGTCTATGCAGTGTGAAGCTTGTGGAGAAAATGCAACATTTACCCAACAGCAATTCCGAGAATTTGATTATGAGAAGTTCACTCAGACTCCCTTGCGTGTGCCTCCTTTGAAGTTAAATCTACTTCCCAGAGAATCAAGAATCAGCAGCAAGGAGTACAGTGAAGTAATTATTAAGAAGGGACCTCATGTGCTGGTTGATGTTAGACCAGCACACCATTTCAAGATTGCATCTCTACCAAAGTCTCTGAACATTCCACTCTCAACATTAGAGGCTAGGCTGCCTGAAGTATCATCAGCTTTGAAGAAAGAGGAAGAGGAAAGTGGTGCAGTTTCTGGGTCAAGTGCACAATTGTATGTAGTATGTAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTATCTTCACAAAATGGGTTTCACTTCTGCCAAGGATATTGTTGGTGGCTTAGAATCTTGGGCCCACAATGTGGACCATCAGTTCCCTACATATTAG

>Glyma.14g019100.2 sequence-type=CDS polypeptide=Glyma.14g019100.2.p locus=Glyma.14g019100 ID=Glyma.14g019100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCATAGGCAGGTTATCCACACCGAAGCATATGTTGGTAAGCCAAAAGTGAAATCTGCCGCTGCTGCTTGTTGCTCGATCAACTCCACTATTCAAGTTGTGGAACATGAAGAAGCTTTGCAGACTTCCAACGCTTTGGAAATTCTCAGCAAATATGATATAATAGTAGATGCAACAGATAATGCTCCTACCCGATACTTGATCAGTGATTGCTGTGTGGTTCTAGGAAAGCCTCTTGTATCAGGTGCTGCACTGGGATTGGAAGGGCAGCTTACTGTCTACAATTACAATGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTAGAACAGCATGCCAAAGTTGTGCTGAGGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTTGAGGCTATTAAGATTGCAGCTTCTGTTGGTGAGCCACTCTCAGGAAGGATGCTTCTCTTGGATGCATTGTCTGGACGGATTCGTATTGTCAAAATTAGAGGAAGGTCTATGCAGTGTGAAGCTTGTGGAGAAAATGCAACATTTACCCAACAGCAATTCCGAGAATTTGATTATGAGAAGTTCACTCAGACTCCCTTGCGTGTGCCTCCTTTGAAGTTAAATCTACTTCCCAGAGAATCAAGAATCAGCAGCAAGGAGTACAGTGAAGTAATTATTAAGAAGGGACCTCATGTGCTGGTTGATGTTAGACCAGCACACCATTTCAAGATTGCATCTCTACCAAAGTCTCTGAACATTCCACTCTCAACATTAGAGGCTAGGCTGCCTGAAGTATCATCAGCTTTGAAGAAAGAGGAAGAGGAAAGTGGTGCAGTTTCTGGGTCAAGTGCACAATTGTATGTAGTATGTAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTATCTTCACAAAATGGGTTTCACTTCTGCCAAGGATATTGTTGGTGGCTTAGAATCTTGGGCCCACAATGTGGACCATCAGTTCCCTACATATTAG
Predicted protein sequences of Glyma.14g019100
>Glyma.14g019100.1.p sequence-type=predicted peptide transcript=Glyma.14g019100.1 locus=Glyma.14g019100 ID=Glyma.14g019100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSASEILRELDSLKDEKTKIEHKISALEAQLREINLQNDAAPPNASSSSSYPTNGLTQDMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGRLGVIDHDVVELNNMHRQVIHTEAYVGKPKVKSAAAACCSINSTIQVVEHEEALQTSNALEILSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCAEGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLLDALSGRIRIVKIRGRSMQCEACGENATFTQQQFREFDYEKFTQTPLRVPPLKLNLLPRESRISSKEYSEVIIKKGPHVLVDVRPAHHFKIASLPKSLNIPLSTLEARLPEVSSALKKEEEESGAVSGSSAQLYVVCRRGNDSQRAVQYLHKMGFTSAKDIVGGLESWAHNVDHQFPTY*

>Glyma.14g019100.2.p sequence-type=predicted peptide transcript=Glyma.14g019100.2 locus=Glyma.14g019100 ID=Glyma.14g019100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MHRQVIHTEAYVGKPKVKSAAAACCSINSTIQVVEHEEALQTSNALEILSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCAEGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLLDALSGRIRIVKIRGRSMQCEACGENATFTQQQFREFDYEKFTQTPLRVPPLKLNLLPRESRISSKEYSEVIIKKGPHVLVDVRPAHHFKIASLPKSLNIPLSTLEARLPEVSSALKKEEEESGAVSGSSAQLYVVCRRGNDSQRAVQYLHKMGFTSAKDIVGGLESWAHNVDHQFPTY*






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