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Report for Sequence Feature Glyma.14g003300

Feature Type:gene_model
Chromosome:Gm14
Start:312114
stop:315407
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.14g003300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G11340.1AT Acyl-CoA N-acyltransferases (NAT) superfamily protein JGI N/AIEA
GO:0006474GO-bp N-terminal protein amino acid acetylation EnsemblGenomesN/AIEA
GO:0007064GO-bp mitotic sister chromatid cohesion EnsemblGenomesN/AIEA
GO:0016573GO-bp histone acetylation EnsemblGenomesN/AIEA
GO:0031415GO-cc NatA complex EnsemblGenomesN/AIEA
GO:0008080GO-mf N-acetyltransferase activity EnsemblGenomesN/AIEA
GO:0008080GO-mf N-acetyltransferase activity JGI N/AIEA
GO:0016747GO-mf transferase activity, transferring acyl groups other than amino-acyl groups JGI N/AIEA
KOG3138 KOG Predicted N-acetyltransferase JGI N/AIEA
PTHR23091Panther N-TERMINAL ACETYLTRANSFERASE JGI N/AIEA
PTHR23091:SF2Panther JGI N/AIEA
PF00583PFAM Acetyltransferase (GNAT) family JGI N/AIEA
GN7V-68440SoyCyc9-rxn N-terminal methionine Nα-acetyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.14g003300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14g003300 not represented in the dataset
Glyma.14g003300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.14g003300
ParalogEvidenceComments
Glyma.02g309600 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14g003300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma14g00630 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.14g003300
>Glyma.14g003300.2 sequence-type=transcript locus=Glyma.14g003300 ID=Glyma.14g003300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGaaaaggaaaaatgaaattgtaaaatgtcaaaagaaCCCCGGGTCTAGGTTTTTCGCTCTCGTCCACCGCCACGCACTCTTCACTCGCAGATTCAAACGTTTCCGAGGTGAGGCTGAGGCATCTCTCTCTGCTTTCTAGAATGGGAGCTGGGCGTGGAGTCTCCATCTCACTTGATGGGGTGAGGGACAAGAACCTTATGCAGCTCAAAAAGCTCAATCTCGCTCTTTTCCCCGTTCGTTACAATGACAAATACTATGTCGATGCACTCGCTTCCGCTTACTATAGTGATATTTGTGTTGGAGCAATTGCATGCCGGCTGGAGAAGAAGGAAGGTGGGGGGCAAGTTCGGGTTTACATCATGACGTTAGGTGTTTTGGCACCTTACCGTGGACTTGGTATTGGAACAAAGTTATTGAATCATGTTCTTGATCTTTGCTCCAAGCAAAACATTTCTGAGGTTTACTTGCATGTGCAGACAAACAATGAAGATGCCATAAACTTCTACAAGAAATTTGGGTTTGAAATTACAGAAACAATCCAGAACTATTATACGAACATTACACCGACAGACTGCTATGTTCTCACGAGGTATACGGCAAGCACAACGAAGAAATAACATTTCAGCCAGTTATTTTGAGGGGAAGTGATCAGAGATTGTTGCATTGTTTTATGGTTTTTGCCATGGATGTATTACACTAAAGTTTTTTATGTCCAATGCTAGACTTTACCATAAAGTTAGCTAAAAAAAAAAGCAGCACTTGGAGATCTCTTGCTAAGGTACTATTATGCTATTTTACCCGTTTGCTCTCATCTACCC
Coding sequences of Glyma.14g003300
>Glyma.14g003300.1 sequence-type=CDS polypeptide=Glyma.14g003300.1.p locus=Glyma.14g003300 ID=Glyma.14g003300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGCTGGGCGTGGAGTCTCCATCTCACTTGATGGGGTGAGGGACAAGAACCTTATGCAGCTCAAAAAGCTCAATCTCGCTCTTTTCCCCGTTCGTTACAATGACAAATACTATGTCGATGCACTCGCTTCCGGTGAATTTACCAAACTAGCTTACTATAGTGATATTTGTGTTGGAGCAATTGCATGCCGGCTGGAGAAGAAGGAAGGTGGGGGGCAAGTTCGGGTTTACATCATGACGTTAGGTGTTTTGGCACCTTACCGTGGACTTGGTATTGGAACAAAGTTATTGAATCATGTTCTTGATCTTTGCTCCAAGCAAAACATTTCTGAGGTTTACTTGCATGTGCAGACAAACAATGAAGATGCCATAAACTTCTACAAGAAATTTGGGTTTGAAATTACAGAAACAATCCAGAACTATTATACGAACATTACACCGACAGACTGCTATGTTCTCACGAGGTATACGGCAAGCACAACGAAGAAATAA

>Glyma.14g003300.2 sequence-type=CDS polypeptide=Glyma.14g003300.2.p locus=Glyma.14g003300 ID=Glyma.14g003300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGCTGGGCGTGGAGTCTCCATCTCACTTGATGGGGTGAGGGACAAGAACCTTATGCAGCTCAAAAAGCTCAATCTCGCTCTTTTCCCCGTTCGTTACAATGACAAATACTATGTCGATGCACTCGCTTCCGCTTACTATAGTGATATTTGTGTTGGAGCAATTGCATGCCGGCTGGAGAAGAAGGAAGGTGGGGGGCAAGTTCGGGTTTACATCATGACGTTAGGTGTTTTGGCACCTTACCGTGGACTTGGTATTGGAACAAAGTTATTGAATCATGTTCTTGATCTTTGCTCCAAGCAAAACATTTCTGAGGTTTACTTGCATGTGCAGACAAACAATGAAGATGCCATAAACTTCTACAAGAAATTTGGGTTTGAAATTACAGAAACAATCCAGAACTATTATACGAACATTACACCGACAGACTGCTATGTTCTCACGAGGTATACGGCAAGCACAACGAAGAAATAA
Predicted protein sequences of Glyma.14g003300
>Glyma.14g003300.1.p sequence-type=predicted peptide transcript=Glyma.14g003300.1 locus=Glyma.14g003300 ID=Glyma.14g003300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGAGRGVSISLDGVRDKNLMQLKKLNLALFPVRYNDKYYVDALASGEFTKLAYYSDICVGAIACRLEKKEGGGQVRVYIMTLGVLAPYRGLGIGTKLLNHVLDLCSKQNISEVYLHVQTNNEDAINFYKKFGFEITETIQNYYTNITPTDCYVLTRYTASTTKK*

>Glyma.14g003300.2.p sequence-type=predicted peptide transcript=Glyma.14g003300.2 locus=Glyma.14g003300 ID=Glyma.14g003300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGAGRGVSISLDGVRDKNLMQLKKLNLALFPVRYNDKYYVDALASAYYSDICVGAIACRLEKKEGGGQVRVYIMTLGVLAPYRGLGIGTKLLNHVLDLCSKQNISEVYLHVQTNNEDAINFYKKFGFEITETIQNYYTNITPTDCYVLTRYTASTTKK*






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