Glyma.14G044800

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Report for Sequence Feature Glyma.14G044800

Feature Type:	gene_model
Chromosome:	Gm14
Start:	3401719
stop:	3406106
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.14G044800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G34570.1	AT	PIN domain-like family protein	JGI	N/A	IEA
GO:0000462	GO-bp	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	EnsemblGenomes	N/A	IEA
GO:0005730	GO-cc	nucleolus	EnsemblGenomes	N/A	IEA
GO:0032040	GO-cc	small-subunit processome	EnsemblGenomes	N/A	IEA
GO:0032040	GO-cc	small-subunit processome	JGI	N/A	IEA
GO:0070181	GO-mf	small ribosomal subunit rRNA binding	EnsemblGenomes	N/A	IEA
KOG3164	KOG	Uncharacterized proteins of PilT N-term./Vapc superfamily	JGI	N/A	IEA
PTHR12416	Panther	UNCHARACTERIZED	JGI	N/A	IEA
PF04900	PFAM	Fcf1	JGI	N/A	IEA

Expression Patterns of Glyma.14G044800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.14G044800 not represented in the dataset	Glyma.14G044800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.14G044800

Paralog	Evidence	Comments
Glyma.02g271800	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.14G044800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.14g044800	Wm82.a4.v1	ISS	As supplied by JGI
Glyma14g04920	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.14G044800

Limit To All Plant Sequences

>Glyma.14g044800.2 sequence-type=transcript locus=Glyma.14g044800 ID=Glyma.14g044800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTTAACATAAGCGTGGGATAAGTGTTAACTTATGCACCCTCGTACAGGCGGCACAGCTTCGTACCCCGTTCTTTTTCTCACTGACAACCCTAACCTAAAGTCTCCGCTGCGCACAGCTGCTCCGCCGTGACTCTGTGGTCGACGGTATAAAATTGTGTTATATGCATTGTTGCAGATGAAGGTGAAAAAGCAGAAGAGGCACAGGAAGATTTTGACGTTTTACACTGCTTGCTTCGGTTTTCGGAAGCCTTACAAGGTTCTATGTGATGGCACATTTGTTCATCACCTTCTTGTGAATCGAATAACCCCTGCTGACACGGCCATTGGCAATGTCCTCAGTGCTACGATCAAGCTCTACACAACAAGATGTGTTCTAGCTGAGTTGAAACGACTTGGTAGCTCGTATTCTGAGGCTCTCGAGGCAGCTCATAAACTTATAGTTGCAAGATGTGAGCATGAAAAATGTAAGAGCGCAGATGCTTGCATCATGGAGGTTGTTGGAGAAAAAAATTCTGAGCATTTCTTTGTTGCTAGTCAGGACACTGACCTGCGGAAACAGTTGCAAGAGGTACCTGGTGTGCCTCTCATATTTGGTCTTAGAAATGCTCTTTTCCTTGAATCTCCATCTGCATTTCAGCGGCAATATGTCAAAACTTCTGAAGAAGGACGATTACATATGACACAGAAGGAGTACCAGATATTTAAGGATAGGGTAATGAATAGATTGACTGGTGAGGAAGCCAACAATTCCATTACTGAAATAATGGAAATTGAAGATTCAGAAGATCAGACCATAAATGTGCAGGCAGTAGAGAAGGGTATTACCTCAAGGAATCGTATGGAAATCAAGGATAAACCTCAGTTCAAGAGAAAAAGAGCTAAGGGTCCAAACCCACTTTCATGCAAGAAGAAGAAAAGTGAAAAACAAAATATTGGTCCTTTGAAGGAAACGAATGAAGACAACACAGTGAAGAGAAGTAGGAAAAGGAAGAGGTCACATAAACAAAAAATGGCAACAGAAACAAGCAGTTAGGTCCatatatatatatatatatatatatatatatatatatatatataCACACAGTTACAAATAGGTATTTTTAGAAGAGCTCCTTGACTTTACTGCTTCTGTTGAGTCGAGAGAAAAGCAAGTTTTAAATCCATGCTGACATGGAAGGGGAAGTGTATCGAGATTAGTTGCTTGTTGAATTTTATACTGTGTCTATTTTGCTGGCTATCGTATTTTTACCTACGGATAGCCAAATAGCCGTTGTTCACGGTGGAAATAGATTCTGATATTTATGATCTTAATTAGAGATGTAAATAGGTTGGTTTGGATTGAATTTCATCAAATTCATGATTCAATCCAATTACATTTGAAAGGTTTGAGTCGATTTTTCTAAGAGAAAAAAAAATGAAATTCAACTCAAATTAATTCGTTTGTAGACGGGTTGGGTTTGGGTTTG

>Glyma.14g044800.3 sequence-type=transcript locus=Glyma.14g044800 ID=Glyma.14g044800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTTAACATAAGCGTGGGATAAGTGTTAACTTATGCACCCTCGTACAGGCGGCACAGCTTCGTACCCCGTTCTTTTTCTCACTGACAACCCTAACCTAAAGTCTCCGCTGCGCACAGCTGCTCCGCCGTGACTCTGTGGTCGACGATTGTGTTATATGCATTGTTGCAGATGAAGGTGAAAAAGCAGAAGAGGCACAGGAAGATTTTGACGTTTTACACTGCTTGCTTCGGTTTTCGGAAGCCTTACAAGGTTCTATGTGATGGCACATTTGTTCATCACCTTCTTGTGAATCGAATAACCCCTGCTGACACGGCCATTGGCAATGTCCTCAGTGCTACGATCAAGCTCTACACAACAAGATGTGTTCTAGCTGAGTTGAAACGACTTGGTAGCTCGTATTCTGAGGCTCTCGAGGCAGCTCATAAACTTATAGTTGCAAGATGTGAGCATGAAAAATGTAAGAGCGCAGATGCTTGCATCATGGAGGTTGTTGGAGAAAAAAATTCTGAGCATTTCTTTGTTGCTAGTCAGGACACTGACCTGCGGAAACAGTTGCAAGAGGTACCTGGTGTGCCTCTCATATTTGGTCTTAGAAATGCTCTTTTCCTTGAATCTCCATCTGCATTTCAGCGGCAATATGTCAAAACTTCTGAAGAAGGACGATTACATATGACACAGAAGGAGTACCAGATATTTAAGGATAGGGTAATGAATAGATTGACTGGTGAGGAAGCCAACAATTCCATTACTGAAATAATGGAAATTGAAGATTCAGAAGATCAGACCATAAATGTGCAGGCAGTAGAGAAGGGTATTACCTCAAGGAATCGTATGGAAATCAAGGATAAACCTCAGTTCAAGAGAAAAAGAGCTAAGGGTCCAAACCCACTTTCATGCAAGAAGAAGAAAAGTGAAAAACAAAATATTGGTCCTTTGAAGGAAACGAATGAAGACAACACAGTGAAGAGAAGTAGGAAAAGGAAGAGGTCACATAAACAAAAAATGGCAACAGAAACAAGCAGTTAGGTCCatatatatatatatatatatatatatatatatatatatatataCACACAGTTACAAATAGGTATTTTTAGAAGAGCTCCTTGACTTTACTGCTTCTGTTGAGTCGAGAGAAAAGCAAGTTTTAAATCCATGCTGACATGGAAGGGGAAGTGTATCGAGATTAGTTGCTTGTTGAATTTTATACTGTGTCTATTTTGCTGGCTATCGTATTTTTACCTACGGATAGCCAAATAGCCGTTGTTCACGGTGGAAATAGATTCTGATATTTATGATCTTAATTAGAGATGTAAATAGGTTGGTTTGGATTGAATTTCATCAAATTCATGATTCAATCCAATTACATTTGAAAGGTTTGAGTCGATTTTTCTAAGAGAAAAAAAAATGAAATTCAACTCAAATTAATTCGTTTGTAGACGGGTTGGGTTTGGGTTTG

>Glyma.14g044800.4 sequence-type=transcript locus=Glyma.14g044800 ID=Glyma.14g044800.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCGTACAGGCGGCACAGCTTCGTACCCCGTTCTTTTTCTCACTGACAACCCTAACCTAAAGTCTCCGCTGCGCACAGCTGCTCCGCCGTGACTCTGTGGTCGACGGTATAAAATGAAGGTGAAAAAGCAGAAGAGGCACAGGAAGATTTTGACGTTTTACACTGCTTGCTTCGGTTTTCGGAAGCCTTACAAGGTTCTATGTGATGGCACATTTGTTCATCACCTTCTTGTGAATCGAATAACCCCTGCTGACACGGCCATTGGCAATGTCCTCAGTGCTACGATCAAGCTCTACACAACAAGATGTGTTCTAGCTGAGTTGAAACGACTTGGTAGCTCGTATTCTGAGGCTCTCGAGGCAGCTCATAAACTTATAGTTGCAAGATGTGAGCATGAAAAATGTAAGAGCGCAGATGCTTGCATCATGGAGGTTGTTGGAGAAAAAAATTCTGAGCATTTCTTTGTTGCTAGTCAGGACACTGACCTGCGGAAACAGTTGCAAGAGGTACCTGGTGTGCCTCTCATATTTGGTCTTAGAAATGCTCTTTTCCTTGAATCTCCATCTGCATTTCAGCGGCAATATGTCAAAACTTCTGAAGAAGGACGATTACATATGACACAGAAGGAGTACCAGATATTTAAGGATAGGGTAATGAATAGATTGACTGGTGAGGAAGCCAACAATTCCATTACTGAAATAATGGAAATTGAAGATTCAGAAGATCAGACCATAAATGTGCAGGCAGTAGAGAAGGGTATTACCTCAAGGAATCGTATGGAAATCAAGGATAAACCTCAGTTCAAGAGAAAAAGAGCTAAGGGTCCAAACCCACTTTCATGCAAGAAGAAGAAAAGTGAAAAACAAAATATTGGTCCTTTGAAGGAAACGAATGAAGACAACACAGTGAAGAGAAGTAGGAAAAGGAAGAGGTCACATAAACAAAAAATGGCAACAGAAACAAGCAGTTAGGTCCatatatatatatatatatatatatatatatatatatatatataCACACAGTTACAAATAGGTATTTTTAGAAGAGCTCCTTGACTTTACTGCTTCTGTTGAGTCGAGAGAAAAGCAAGTTTTAAATCCATGCTGACATGGAAGGGGAAGTGTATCGAGATTAGTTGCTTGTTGAATTTTATACTGTGTCTATTTTGCTGGCTATCGTATTTTTACCTACGGATAGCCAAATAGCCGTTGTTCACGGTGGAAATAGATTCTGATATTTATGATCTTAATTAGAGATGTAAATAGGTTGGTTTGGATTGAATTTCATCAAATTCATGATTCAATCCAATTACATTTGAAAGGTTTGAGTCGATTTTTCTAAGAGAAAAAAAAATGAAATTCAACTCAAA

Coding sequences of Glyma.14G044800

Limit To All Plant Sequences

>Glyma.14g044800.1 sequence-type=CDS polypeptide=Glyma.14g044800.1.p locus=Glyma.14g044800 ID=Glyma.14g044800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGTGAAAAAGCAGAAGAGGCACAGGAAGATTTTGACGTTTTACACTGCTTGCTTCGGTTTTCGGAAGCCTTACAAGGTTCTATGTGATGGCACATTTGTTCATCACCTTCTTGTGAATCGAATAACCCCTGCTGACACGGCCATTGGCAATGTCCTCAGTGCTACGATCAAGCTCTACACAACAAGATGTGTTCTAGCTGAGTTGAAACGACTTGGTAGCTCGTATTCTGAGGCTCTCGAGGCAGCTCATAAACTTATAGTTGCAAGATGTGAGCATGAAAAATGTAAGAGCGCAGATGCTTGCATCATGGAGGTTGTTGGAGAAAAAAATTCTGAGCATTTCTTTGTTGCTAGTCAGGACACTGACCTGCGGAAACAGTTGCAAGAGGTACCTGGTGTGCCTCTCATATTTGGTCTTAGAAATGCTCTTTTCCTTGAATCTCCATCTGCATTTCAGCGGCAATATGTCAAAACTTCTGAAGAAGGACGATTACATATGACACAGAAGGAGTACCAGATATTTAAGGATAGGGTAATGAATAGATTGACTGGTGAGGAAGCCAACAATTCCATTACTGAAATAATGGAAATTGAAGATTCAGAAGATCAGACCATAAATGTGCAGGCAGTAGAGAAGGGTATTACCTCAAGGAATCGTATGGAAATCAAGGATAAACCTCAGTTCAAGAGAAAAAGAGCTAAGGGTCCAAACCCACTTTCATGCAAGAAGAAGAAAAGTGAAAAACAAAATATTGGTCCTTTGAAGGAAACGAATGAAGACAACACAGTGAAGAGAAGTAGGAAAAGGAAGAGGTCACATAAACAAAAAATGGCAACAGAAACAAGCAGTTAG

>Glyma.14g044800.2 sequence-type=CDS polypeptide=Glyma.14g044800.2.p locus=Glyma.14g044800 ID=Glyma.14g044800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGTGAAAAAGCAGAAGAGGCACAGGAAGATTTTGACGTTTTACACTGCTTGCTTCGGTTTTCGGAAGCCTTACAAGGTTCTATGTGATGGCACATTTGTTCATCACCTTCTTGTGAATCGAATAACCCCTGCTGACACGGCCATTGGCAATGTCCTCAGTGCTACGATCAAGCTCTACACAACAAGATGTGTTCTAGCTGAGTTGAAACGACTTGGTAGCTCGTATTCTGAGGCTCTCGAGGCAGCTCATAAACTTATAGTTGCAAGATGTGAGCATGAAAAATGTAAGAGCGCAGATGCTTGCATCATGGAGGTTGTTGGAGAAAAAAATTCTGAGCATTTCTTTGTTGCTAGTCAGGACACTGACCTGCGGAAACAGTTGCAAGAGGTACCTGGTGTGCCTCTCATATTTGGTCTTAGAAATGCTCTTTTCCTTGAATCTCCATCTGCATTTCAGCGGCAATATGTCAAAACTTCTGAAGAAGGACGATTACATATGACACAGAAGGAGTACCAGATATTTAAGGATAGGGTAATGAATAGATTGACTGGTGAGGAAGCCAACAATTCCATTACTGAAATAATGGAAATTGAAGATTCAGAAGATCAGACCATAAATGTGCAGGCAGTAGAGAAGGGTATTACCTCAAGGAATCGTATGGAAATCAAGGATAAACCTCAGTTCAAGAGAAAAAGAGCTAAGGGTCCAAACCCACTTTCATGCAAGAAGAAGAAAAGTGAAAAACAAAATATTGGTCCTTTGAAGGAAACGAATGAAGACAACACAGTGAAGAGAAGTAGGAAAAGGAAGAGGTCACATAAACAAAAAATGGCAACAGAAACAAGCAGTTAG

>Glyma.14g044800.3 sequence-type=CDS polypeptide=Glyma.14g044800.3.p locus=Glyma.14g044800 ID=Glyma.14g044800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGTGAAAAAGCAGAAGAGGCACAGGAAGATTTTGACGTTTTACACTGCTTGCTTCGGTTTTCGGAAGCCTTACAAGGTTCTATGTGATGGCACATTTGTTCATCACCTTCTTGTGAATCGAATAACCCCTGCTGACACGGCCATTGGCAATGTCCTCAGTGCTACGATCAAGCTCTACACAACAAGATGTGTTCTAGCTGAGTTGAAACGACTTGGTAGCTCGTATTCTGAGGCTCTCGAGGCAGCTCATAAACTTATAGTTGCAAGATGTGAGCATGAAAAATGTAAGAGCGCAGATGCTTGCATCATGGAGGTTGTTGGAGAAAAAAATTCTGAGCATTTCTTTGTTGCTAGTCAGGACACTGACCTGCGGAAACAGTTGCAAGAGGTACCTGGTGTGCCTCTCATATTTGGTCTTAGAAATGCTCTTTTCCTTGAATCTCCATCTGCATTTCAGCGGCAATATGTCAAAACTTCTGAAGAAGGACGATTACATATGACACAGAAGGAGTACCAGATATTTAAGGATAGGGTAATGAATAGATTGACTGGTGAGGAAGCCAACAATTCCATTACTGAAATAATGGAAATTGAAGATTCAGAAGATCAGACCATAAATGTGCAGGCAGTAGAGAAGGGTATTACCTCAAGGAATCGTATGGAAATCAAGGATAAACCTCAGTTCAAGAGAAAAAGAGCTAAGGGTCCAAACCCACTTTCATGCAAGAAGAAGAAAAGTGAAAAACAAAATATTGGTCCTTTGAAGGAAACGAATGAAGACAACACAGTGAAGAGAAGTAGGAAAAGGAAGAGGTCACATAAACAAAAAATGGCAACAGAAACAAGCAGTTAG

>Glyma.14g044800.4 sequence-type=CDS polypeptide=Glyma.14g044800.4.p locus=Glyma.14g044800 ID=Glyma.14g044800.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGTGAAAAAGCAGAAGAGGCACAGGAAGATTTTGACGTTTTACACTGCTTGCTTCGGTTTTCGGAAGCCTTACAAGGTTCTATGTGATGGCACATTTGTTCATCACCTTCTTGTGAATCGAATAACCCCTGCTGACACGGCCATTGGCAATGTCCTCAGTGCTACGATCAAGCTCTACACAACAAGATGTGTTCTAGCTGAGTTGAAACGACTTGGTAGCTCGTATTCTGAGGCTCTCGAGGCAGCTCATAAACTTATAGTTGCAAGATGTGAGCATGAAAAATGTAAGAGCGCAGATGCTTGCATCATGGAGGTTGTTGGAGAAAAAAATTCTGAGCATTTCTTTGTTGCTAGTCAGGACACTGACCTGCGGAAACAGTTGCAAGAGGTACCTGGTGTGCCTCTCATATTTGGTCTTAGAAATGCTCTTTTCCTTGAATCTCCATCTGCATTTCAGCGGCAATATGTCAAAACTTCTGAAGAAGGACGATTACATATGACACAGAAGGAGTACCAGATATTTAAGGATAGGGTAATGAATAGATTGACTGGTGAGGAAGCCAACAATTCCATTACTGAAATAATGGAAATTGAAGATTCAGAAGATCAGACCATAAATGTGCAGGCAGTAGAGAAGGGTATTACCTCAAGGAATCGTATGGAAATCAAGGATAAACCTCAGTTCAAGAGAAAAAGAGCTAAGGGTCCAAACCCACTTTCATGCAAGAAGAAGAAAAGTGAAAAACAAAATATTGGTCCTTTGAAGGAAACGAATGAAGACAACACAGTGAAGAGAAGTAGGAAAAGGAAGAGGTCACATAAACAAAAAATGGCAACAGAAACAAGCAGTTAG

Predicted protein sequences of Glyma.14G044800

Limit To All Plant Sequences

>Glyma.14g044800.1.p sequence-type=predicted peptide transcript=Glyma.14g044800.1 locus=Glyma.14g044800 ID=Glyma.14g044800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKVKKQKRHRKILTFYTACFGFRKPYKVLCDGTFVHHLLVNRITPADTAIGNVLSATIKLYTTRCVLAELKRLGSSYSEALEAAHKLIVARCEHEKCKSADACIMEVVGEKNSEHFFVASQDTDLRKQLQEVPGVPLIFGLRNALFLESPSAFQRQYVKTSEEGRLHMTQKEYQIFKDRVMNRLTGEEANNSITEIMEIEDSEDQTINVQAVEKGITSRNRMEIKDKPQFKRKRAKGPNPLSCKKKKSEKQNIGPLKETNEDNTVKRSRKRKRSHKQKMATETSS*

>Glyma.14g044800.2.p sequence-type=predicted peptide transcript=Glyma.14g044800.2 locus=Glyma.14g044800 ID=Glyma.14g044800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKVKKQKRHRKILTFYTACFGFRKPYKVLCDGTFVHHLLVNRITPADTAIGNVLSATIKLYTTRCVLAELKRLGSSYSEALEAAHKLIVARCEHEKCKSADACIMEVVGEKNSEHFFVASQDTDLRKQLQEVPGVPLIFGLRNALFLESPSAFQRQYVKTSEEGRLHMTQKEYQIFKDRVMNRLTGEEANNSITEIMEIEDSEDQTINVQAVEKGITSRNRMEIKDKPQFKRKRAKGPNPLSCKKKKSEKQNIGPLKETNEDNTVKRSRKRKRSHKQKMATETSS*

>Glyma.14g044800.3.p sequence-type=predicted peptide transcript=Glyma.14g044800.3 locus=Glyma.14g044800 ID=Glyma.14g044800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKVKKQKRHRKILTFYTACFGFRKPYKVLCDGTFVHHLLVNRITPADTAIGNVLSATIKLYTTRCVLAELKRLGSSYSEALEAAHKLIVARCEHEKCKSADACIMEVVGEKNSEHFFVASQDTDLRKQLQEVPGVPLIFGLRNALFLESPSAFQRQYVKTSEEGRLHMTQKEYQIFKDRVMNRLTGEEANNSITEIMEIEDSEDQTINVQAVEKGITSRNRMEIKDKPQFKRKRAKGPNPLSCKKKKSEKQNIGPLKETNEDNTVKRSRKRKRSHKQKMATETSS*

>Glyma.14g044800.4.p sequence-type=predicted peptide transcript=Glyma.14g044800.4 locus=Glyma.14g044800 ID=Glyma.14g044800.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKVKKQKRHRKILTFYTACFGFRKPYKVLCDGTFVHHLLVNRITPADTAIGNVLSATIKLYTTRCVLAELKRLGSSYSEALEAAHKLIVARCEHEKCKSADACIMEVVGEKNSEHFFVASQDTDLRKQLQEVPGVPLIFGLRNALFLESPSAFQRQYVKTSEEGRLHMTQKEYQIFKDRVMNRLTGEEANNSITEIMEIEDSEDQTINVQAVEKGITSRNRMEIKDKPQFKRKRAKGPNPLSCKKKKSEKQNIGPLKETNEDNTVKRSRKRKRSHKQKMATETSS*

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