|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G32600.1 | AT | hydroxyproline-rich glycoprotein family protein | JGI | N/A | IEA |
GO:0000245 | GO-bp | spliceosomal complex assembly | EnsemblGenomes | N/A | IEA |
GO:0005634 | GO-cc | nucleus | EnsemblGenomes | N/A | IEA |
GO:0005686 | GO-cc | U2 snRNP | EnsemblGenomes | N/A | IEA |
GO:0071004 | GO-cc | U2-type prespliceosome | EnsemblGenomes | N/A | IEA |
GO:0071013 | GO-cc | catalytic step 2 spliceosome | EnsemblGenomes | N/A | IEA |
GO:0003676 | GO-mf | nucleic acid binding | EnsemblGenomes | N/A | IEA |
GO:0003723 | GO-mf | RNA binding | EnsemblGenomes | N/A | IEA |
GO:0008270 | GO-mf | zinc ion binding | EnsemblGenomes | N/A | IEA |
GO:0046872 | GO-mf | metal ion binding | EnsemblGenomes | N/A | IEA |
KOG0227 | KOG | Splicing factor 3a, subunit 2 | JGI | N/A | IEA |
PTHR23205 | Panther | SPLICING FACTOR 3A SUBUNIT 2 | JGI | N/A | IEA |
Glyma.13g367400 not represented in the dataset |
Glyma.13g367400 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma13g44430 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.13g367400.1 sequence-type=CDS polypeptide=Glyma.13g367400.1.p locus=Glyma.13g367400 ID=Glyma.13g367400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGATCGAGAATGGGGATCGAAGCCGGGGAGCGGAGGTGCGGCGTCGGCGCAGAACGAAGCCATAGACCGGCGAGAGCGTCTCCGGCGATTGGCTCTGGAGACCATAGACCTGGCGAAGGATCCCTATTTCATGCGCAACCACCTCGGAAGCTACGAATGCAAACTCTGTCTCACTCTCCACAACAACGAGGGCAACTACTTGGCTCACACTCAGGGAAAGCGCCACCAAACCAACTTGGCCAAACGTGCAGCTCGCGAGGCCAAGGACTCCCCCGCGCAGCCCCAACCTCACAAACGCAAAGTCACTCTTCGAAAAACAGTGAAGATTGGACGACCTGGGTACCGTGTCACCAAGCAGTATGACCCGGAGACTAAACAAAGATCTCTCCTATTCCAGATTGAATATCCGGAGATTGAAGACCTCACGAAGCCGAGGCACCGGTTTATGTCCTCCTATGAACAGAGGGTGCAACCCTTTGATAAAAGTTATCAGTACCTCTTGTTTGCTGCTGAACCATACGAAATCGTTGCTTTCAAGGTGCCGAGCACGGAGATTGACAAGTCCACTCCAAAGTTCTTCTCGCACTGGGATCCTGACTCAAAGATGTTCACGCTGCAATTGTATTTTAAATCCAAGCCGCCAGAGGCGAACAAACCACAGCCTGCCACTACTGCCAATGGCACAGCGCCATCTGGTGTTCCACCAAGGCCTTTGCCCCCACCACCCCAAGGTCCACTACCACCACCTCCCCCTCCTCCACAAGGGCTACCTCCTGGCGCACCTATGGCAAATCCTCCTAGAGCTCCTCCACCTCCAATGCCGGGATCTATGCCACCTCCTCCTCCTATGACAGCAGCTAACGGTCCTAGACCTCCACCTTCTGGTGGAATGCCATCTATTCCACCCCCACCCCCTGTTGCAAGTGGGACATCGGGTTTCAACATGGGTGCTAGACCTCCATCAATGCCACCTCCCCAAGGTTTTCCTTCCCAACCTATGCAGGGTCAGGGTGTCCGTCTTCCTCCTCCGCCCCCTAACATGGGACAGTAG
>Glyma.13g367400.1.p sequence-type=predicted peptide transcript=Glyma.13g367400.1 locus=Glyma.13g367400 ID=Glyma.13g367400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDSPAQPQPHKRKVTLRKTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKSYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPPEANKPQPATTANGTAPSGVPPRPLPPPPQGPLPPPPPPPQGLPPGAPMANPPRAPPPPMPGSMPPPPPMTAANGPRPPPSGGMPSIPPPPPVASGTSGFNMGARPPSMPPPQGFPSQPMQGQGVRLPPPPPNMGQ*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||