Glyma.13g360700

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Report for Sequence Feature Glyma.13g360700

Feature Type:	gene_model
Chromosome:	Gm13
Start:	44773333
stop:	44778270
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.13g360700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G15660.1	AT	centromere protein C	JGI	N/A	IEA
GO:0051315	GO-bp	attachment of mitotic spindle microtubules to kinetochore	EnsemblGenomes	N/A	IEA
GO:0051382	GO-bp	kinetochore assembly	EnsemblGenomes	N/A	IEA
GO:0051455	GO-bp	attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation	EnsemblGenomes	N/A	IEA
GO:0000776	GO-cc	kinetochore	EnsemblGenomes	N/A	IEA
GO:0000778	GO-cc	condensed nuclear chromosome kinetochore	EnsemblGenomes	N/A	IEA
GO:0019237	GO-mf	centromeric DNA binding	EnsemblGenomes	N/A	IEA
PTHR16684	Panther	CENTROMERE PROTEIN C	JGI	N/A	IEA
PTHR16684:SF7	Panther		JGI	N/A	IEA

Expression Patterns of Glyma.13g360700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.13g360700 not represented in the dataset	Glyma.13g360700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.13g360700

Paralog	Evidence	Comments
Glyma.15g013200	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.13g360700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma13g43740	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.13g360700

Limit To All Plant Sequences

>Glyma.13g360700.2 sequence-type=transcript locus=Glyma.13g360700 ID=Glyma.13g360700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCAAACGAAACGGAACGAAGAAGGAGCAGCTCCCGCTCAGATTTTTGTTTTCAATTTTCGAATTGAAATAAAATACCATCCACTATCTAGGGTTTGGTTTCGTTGTTCGAATCTGTTATCTATTTCCGAACCAATAATGCGACGCGAACGTTAATGGAGAAAGAAGGTGATGCATTAGTGGATCCTCTCTCCAACTATTGGGGACTTTCCCTCTTTCCTCAACCATCTTTCCCACCCTCCAAACCCTACAACTCAGACCAAGATCTTCACACCATCCACACTCACCTCAGATCCATGGCCTTGCGGAGTCCCGCCAAACTGGTGCACCAGGCCAAGTCCATAGTAGATGGTAATCCTCAACTGTTCAACTCTGAAAATTCGAACCATCCAACATCTCAGAAGACAAATGATGCTGAAGGGGAATTTCGTCGAAACCCGAGACCAGGGTTAGGGCTTAAACGTCCACGCTTCTCTATGAAGCCAACTAAGAAGCCATCTGTTGAGAGTTTGCTACCAACTCTGGACCTTGATAGCCTCAAGGATCCGGCGGAATTCTTCTTGGCTCATGAACGGTTGGAAAATGCAAAAAGAGAAATACAGAAGCAGCTGGGTGGTGCCTCATTTGAGTCAGATCAGGATAATGTGGCCGCTAGACCACGACAACGTCGACCGGGGCTTTTGGGGAATAATCAATTGCCAATCAAGTACAAGCATCGGTATCCAAAAGAAACCTCTGATGATGTTCTGTCCTCTCAAGAGACATTAGGGTCTCAGAGTCTTGCTCCTGTGACCGAGAACACTGACAAAGGAGAGGCTAGTATGGCATCATCAGAAAAAGAAGTAATAGATTCATCTGGTACGAAAGGGATTGAGCTTGATGAATTGTTGGATGGATTGCTTCATTGTGATTCTGAAGATCTAGAGGGGGATGGGGCAATTACTCTTTTGCAGGAGAGGTTACAGATCAAACCCATTGCTTTAGAGAAATTTTCTGTTCCAGACTTCCCAGATAAGCAAATGGTTGATCTGAAATCTCTGCAAGGGAACAAGTCAAAGCCAAGGAAGGCTTTATCCGATATTGATAATTTGTTGAAAGGAATGAGTATGAATATGAATAAGAAGACACCTCTTAAAAAGGCTGTACAGTGCCCTGTACAGCAATTAGCTTCACCCACCCCTCCAAGAAGTCCATTTGCTTCGTTGTCGTTGTTGCAGAAGCACATTTCACAGTCAAAACAATCAATGGATCCTTTTTCAGCTCATGAAATTGATCACTTATCTAGCAAAAACTATTCCCCAACTCATATGGTAAATCCAGAACTCAATCTTGTTAGATCTGCGAACCCGTCAAATGAATTGAATGCACACATGATTGAAGATGCTATTGCTGTTGGTAAGGCAAGTACAGTTTTGGACACAGACAGAAATGACACCAATTCTTCTGAAATTCCCAAGGAAGAAAAATCTGGGAAGTCATCAAATAAACTGAATGCGCCCTCAATTCAAGATATAATTGCAGTAGGTGGGACTAGTTTGGCTGAGGACACAGTCAGAAATGGCACCAGTACTTCTAGAAAGTCCATGGTGGATAATTCAAGGGAACCTAGGTTTGATGTTAATATTCTCTCAAATGAACCTCATGGTGACATGGATGTAGATGTTGGAGGCAGTGGTATGGGTGACAACAAGGACAGGTCTAATATTGAGGCACACACAATTGAAGGTGACATTGCCGTTAGTAACACAAGTACAGTTTTGGACACAGACATAAATGGCACCCACACTTCTGAAGTTTCCAAGGAAGATAATTCTGGGAAGTCATCAAATAATCTGAATGTGTCCTTGATTGAAGATATAATTGCAGTTTATGGGACAAGTTTGGCAGAGGACACAACCAGAAATTGTACCAGTACTTTTAAAAAATCCATGGTGGATAATTCGAGGGAACCCAGGTTTGATGTTACTCTTGACTCAAATGAACCTCATGTCAACATGGATGTAGATGTTGGAGTCAGTGCTGTGGGTGATAGGGTTATGGATGACACCAAGGACAGGTCAAATATCGAGGTGAATGCATCCTGTCAATCTGAGGACAAAGCAGAAAATATGCAGACATTTACAGCTTCTATCCCAACAGATGGCATGAATCTCAACGTACTGAATCCTCTAGCTGATCAACCAAATCCTGCTGGATATGAAGCTAATTCTGTGGATAAACGTGCCAGAAGATCAGATGATGATCCAGAACATTGTTTACAGGAAAAGACAGATGGTTCTATGGTGCCTGTTAATGGACAAAAGAGAGTTAAGTCACTTGTGCAAAAAGTGTCCAAGAATAAAAAACTTTCGAATAGACACAGCCTTGCAGCTGCTGGTACATCATGGACTTCTGGATTAAGGAGAAGCACCAGGATCAGGACAAGGCCATTGGAATACTGGAAAGGGGAAAGACTGGTGTATGGCCGTGTACACAAAAGTTTGGCTACTGTCATTGGGGTCAAGTGTATTTCACCAGGAAGTGATGGAAAACCGATTATGAAGGTGAAATCTTATGTATCAGATAAACACAAAGAGCTTTTCGAGTTGGCATCTCTATATTGAATGTAAAATAAGTTCTTCAGATTTATTTTCTGTAACAAACCTAGGTTCCCTTGTACTACTGAGCTGCATGTATTGCATTGTCTATAGCTATAATCACTTAATCAGTTAAGTGGCAAGAAAACTCAATTGATAGTAATTAATTGTTTAATCCCCTTGTATTGTTATTTACTCAAATGATTTTAAATCAACTTTTTTTTCA

Coding sequences of Glyma.13g360700

Limit To All Plant Sequences

>Glyma.13g360700.1 sequence-type=CDS polypeptide=Glyma.13g360700.1.p locus=Glyma.13g360700 ID=Glyma.13g360700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAAAGAAGGTGATGCATTAGTGGATCCTCTCTCCAACTATTGGGGACTTTCCCTCTTTCCTCAACCATCTTTCCCACCCTCCAAACCCTACAACTCAGACCAAGATCTTCACACCATCCACACTCACCTCAGATCCATGGCCTTGCGGAGTCCCGCCAAACTGGTGCACCAGGCCAAGTCCATAGTAGATGGTAATCCTCAACTGTTCAACTCTGAAAATTCGAACCATCCAACATCTCAGAAGACAAATGATGCTGAAGGGGAATTTCGTCGAAACCCGAGACCAGGGTTAGGGCTTAAACGTCCACGCTTCTCTATGAAGCCAACTAAGAAGCCATCTGTTGAGAGTTTGCTACCAACTCTGGACCTTGATAGCCTCAAGGATCCGGCGGAATTCTTCTTGGCTCATGAACGGTTGGAAAATGCAAAAAGAGAAATACAGAAGCAGCTGGGTGGTGCCTCATTTGAGTCAGATCAGGATAATGTGGCCGCTAGACCACGACAACGTCGACCGGGGCTTTTGGGGAATAATCAATTGCCAATCAAGTACAAGCATCGGTATCCAAAAGAAACCTCTGATGATGTTCTGTCCTCTCAAGAGACATTAGGGTCTCAGAGTCTTGCTCCTGTGACCGAGAACACTGACAAAGGAGAGGCTAGTATGGCATCATCAGAAAAAGAAGTAATAGATTCATCTGGTACGAAAGGGATTGAGCTTGATGAATTGTTGGATGGATTGCTTCATTGTGATTCTGAAGATCTAGAGGGGGATGGGGCAATTACTCTTTTGCAGGAGAGGTTACAGATCAAACCCATTGCTTTAGAGAAATTTTCTGTTCCAGACTTCCCAGATAAGCAAATGGTTGATCTGAAATCTCTGCAAGGGAACAAGTCAAAGCCAAGGAAGGCTTTATCCGATATTGATAATTTGTTGAAAGGAATGAGTATGAATATGAATAAGAAGACACCTCTTAAAAAGGCTGTACAGTGCCCTGTACAGCAATTAGCTTCACCCACCCCTCCAAGAAGTCCATTTGCTTCGTTGTCGTTGTTGCAGAAGCACATTTCACAGTCAAAACAATCAATGGATCCTTTTTCAGCTCATGAAATTGATCACTTATCTAGCAAAAACTATTCCCCAACTCATATGGTAAATCCAGAACTCAATCTTGTTAGATCTGCGAACCCGTCAAATGAATTGAATGCACACATGATTGAAGATGCTATTGCTGTTGGTAAGGCAAGTACAGTTTTGGACACAGACAGAAATGACACCAATTCTTCTGAAATTCCCAAGGAAGAAAAATCTGGGAAGTCATCAAATAAACTGAATGCGCCCTCAATTCAAGATATAATTGCAGTAGGTGGGACTAGTTTGGCTGAGGACACAGTCAGAAATGGCACCAGTACTTCTAGAAAGTCCATGGTGGATAATTCAAGGGAACCTAGGTTTGATGTTAATATTCTCTCAAATGAACCTCATGGTGACATGGATGTAGATGTTGGAGGCAGTGGTATGGGTGACAACAAGGACAGGTCTAATATTGAGGCACACACAATTGAAGGTGACATTGCCGTTAGTAACACAAGTACAGTTTTGGACACAGACATAAATGGCACCCACACTTCTGAAGTTTCCAAGGAAGATAATTCTGGGAAGTCATCAAATAATCTGAATGTGTCCTTGATTGAAGATATAATTGCAGTTTATGGGACAAGTTTGGCAGAGGACACAACCAGAAATTGTACCAGTACTTTTAAAAAATCCATGGTGGATAATTCGAGGGAACCCAGGTTTGATGTTACTCTTGACTCAAATGAACCTCATGTCAACATGGATGTAGATGTTGGAGTCAGTGCTGTGGGTGATAGGGTTATGGATGACACCAAGGACAGGTCAAATATCGAGGTGAATGCATCCTGTCAATCTGAGGACAAAATGCAGGCAGAAAATATGCAGACATTTACAGCTTCTATCCCAACAGATGGCATGAATCTCAACGTACTGAATCCTCTAGCTGATCAACCAAATCCTGCTGGATATGAAGCTAATTCTGTGGATAAACGTGCCAGAAGATCAGATGATGATCCAGAACATTGTTTACAGGAAAAGACAGATGGTTCTATGGTGCCTGTTAATGGACAAAAGAGAGTTAAGTCACTTGTGCAAAAAGTGTCCAAGAATAAAAAACTTTCGAATAGACACAGCCTTGCAGCTGCTGGTACATCATGGACTTCTGGATTAAGGAGAAGCACCAGGATCAGGACAAGGCCATTGGAATACTGGAAAGGGGAAAGACTGGTGTATGGCCGTGTACACAAAAGTTTGGCTACTGTCATTGGGGTCAAGTGTATTTCACCAGGAAGTGATGGAAAACCGATTATGAAGGTGAAATCTTATGTATCAGATAAACACAAAGAGCTTTTCGAGTTGGCATCTCTATATTGA

>Glyma.13g360700.2 sequence-type=CDS polypeptide=Glyma.13g360700.2.p locus=Glyma.13g360700 ID=Glyma.13g360700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAAAGAAGGTGATGCATTAGTGGATCCTCTCTCCAACTATTGGGGACTTTCCCTCTTTCCTCAACCATCTTTCCCACCCTCCAAACCCTACAACTCAGACCAAGATCTTCACACCATCCACACTCACCTCAGATCCATGGCCTTGCGGAGTCCCGCCAAACTGGTGCACCAGGCCAAGTCCATAGTAGATGGTAATCCTCAACTGTTCAACTCTGAAAATTCGAACCATCCAACATCTCAGAAGACAAATGATGCTGAAGGGGAATTTCGTCGAAACCCGAGACCAGGGTTAGGGCTTAAACGTCCACGCTTCTCTATGAAGCCAACTAAGAAGCCATCTGTTGAGAGTTTGCTACCAACTCTGGACCTTGATAGCCTCAAGGATCCGGCGGAATTCTTCTTGGCTCATGAACGGTTGGAAAATGCAAAAAGAGAAATACAGAAGCAGCTGGGTGGTGCCTCATTTGAGTCAGATCAGGATAATGTGGCCGCTAGACCACGACAACGTCGACCGGGGCTTTTGGGGAATAATCAATTGCCAATCAAGTACAAGCATCGGTATCCAAAAGAAACCTCTGATGATGTTCTGTCCTCTCAAGAGACATTAGGGTCTCAGAGTCTTGCTCCTGTGACCGAGAACACTGACAAAGGAGAGGCTAGTATGGCATCATCAGAAAAAGAAGTAATAGATTCATCTGGTACGAAAGGGATTGAGCTTGATGAATTGTTGGATGGATTGCTTCATTGTGATTCTGAAGATCTAGAGGGGGATGGGGCAATTACTCTTTTGCAGGAGAGGTTACAGATCAAACCCATTGCTTTAGAGAAATTTTCTGTTCCAGACTTCCCAGATAAGCAAATGGTTGATCTGAAATCTCTGCAAGGGAACAAGTCAAAGCCAAGGAAGGCTTTATCCGATATTGATAATTTGTTGAAAGGAATGAGTATGAATATGAATAAGAAGACACCTCTTAAAAAGGCTGTACAGTGCCCTGTACAGCAATTAGCTTCACCCACCCCTCCAAGAAGTCCATTTGCTTCGTTGTCGTTGTTGCAGAAGCACATTTCACAGTCAAAACAATCAATGGATCCTTTTTCAGCTCATGAAATTGATCACTTATCTAGCAAAAACTATTCCCCAACTCATATGGTAAATCCAGAACTCAATCTTGTTAGATCTGCGAACCCGTCAAATGAATTGAATGCACACATGATTGAAGATGCTATTGCTGTTGGTAAGGCAAGTACAGTTTTGGACACAGACAGAAATGACACCAATTCTTCTGAAATTCCCAAGGAAGAAAAATCTGGGAAGTCATCAAATAAACTGAATGCGCCCTCAATTCAAGATATAATTGCAGTAGGTGGGACTAGTTTGGCTGAGGACACAGTCAGAAATGGCACCAGTACTTCTAGAAAGTCCATGGTGGATAATTCAAGGGAACCTAGGTTTGATGTTAATATTCTCTCAAATGAACCTCATGGTGACATGGATGTAGATGTTGGAGGCAGTGGTATGGGTGACAACAAGGACAGGTCTAATATTGAGGCACACACAATTGAAGGTGACATTGCCGTTAGTAACACAAGTACAGTTTTGGACACAGACATAAATGGCACCCACACTTCTGAAGTTTCCAAGGAAGATAATTCTGGGAAGTCATCAAATAATCTGAATGTGTCCTTGATTGAAGATATAATTGCAGTTTATGGGACAAGTTTGGCAGAGGACACAACCAGAAATTGTACCAGTACTTTTAAAAAATCCATGGTGGATAATTCGAGGGAACCCAGGTTTGATGTTACTCTTGACTCAAATGAACCTCATGTCAACATGGATGTAGATGTTGGAGTCAGTGCTGTGGGTGATAGGGTTATGGATGACACCAAGGACAGGTCAAATATCGAGGTGAATGCATCCTGTCAATCTGAGGACAAAGCAGAAAATATGCAGACATTTACAGCTTCTATCCCAACAGATGGCATGAATCTCAACGTACTGAATCCTCTAGCTGATCAACCAAATCCTGCTGGATATGAAGCTAATTCTGTGGATAAACGTGCCAGAAGATCAGATGATGATCCAGAACATTGTTTACAGGAAAAGACAGATGGTTCTATGGTGCCTGTTAATGGACAAAAGAGAGTTAAGTCACTTGTGCAAAAAGTGTCCAAGAATAAAAAACTTTCGAATAGACACAGCCTTGCAGCTGCTGGTACATCATGGACTTCTGGATTAAGGAGAAGCACCAGGATCAGGACAAGGCCATTGGAATACTGGAAAGGGGAAAGACTGGTGTATGGCCGTGTACACAAAAGTTTGGCTACTGTCATTGGGGTCAAGTGTATTTCACCAGGAAGTGATGGAAAACCGATTATGAAGGTGAAATCTTATGTATCAGATAAACACAAAGAGCTTTTCGAGTTGGCATCTCTATATTGA

Predicted protein sequences of Glyma.13g360700

Limit To All Plant Sequences

>Glyma.13g360700.1.p sequence-type=predicted peptide transcript=Glyma.13g360700.1 locus=Glyma.13g360700 ID=Glyma.13g360700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKEGDALVDPLSNYWGLSLFPQPSFPPSKPYNSDQDLHTIHTHLRSMALRSPAKLVHQAKSIVDGNPQLFNSENSNHPTSQKTNDAEGEFRRNPRPGLGLKRPRFSMKPTKKPSVESLLPTLDLDSLKDPAEFFLAHERLENAKREIQKQLGGASFESDQDNVAARPRQRRPGLLGNNQLPIKYKHRYPKETSDDVLSSQETLGSQSLAPVTENTDKGEASMASSEKEVIDSSGTKGIELDELLDGLLHCDSEDLEGDGAITLLQERLQIKPIALEKFSVPDFPDKQMVDLKSLQGNKSKPRKALSDIDNLLKGMSMNMNKKTPLKKAVQCPVQQLASPTPPRSPFASLSLLQKHISQSKQSMDPFSAHEIDHLSSKNYSPTHMVNPELNLVRSANPSNELNAHMIEDAIAVGKASTVLDTDRNDTNSSEIPKEEKSGKSSNKLNAPSIQDIIAVGGTSLAEDTVRNGTSTSRKSMVDNSREPRFDVNILSNEPHGDMDVDVGGSGMGDNKDRSNIEAHTIEGDIAVSNTSTVLDTDINGTHTSEVSKEDNSGKSSNNLNVSLIEDIIAVYGTSLAEDTTRNCTSTFKKSMVDNSREPRFDVTLDSNEPHVNMDVDVGVSAVGDRVMDDTKDRSNIEVNASCQSEDKMQAENMQTFTASIPTDGMNLNVLNPLADQPNPAGYEANSVDKRARRSDDDPEHCLQEKTDGSMVPVNGQKRVKSLVQKVSKNKKLSNRHSLAAAGTSWTSGLRRSTRIRTRPLEYWKGERLVYGRVHKSLATVIGVKCISPGSDGKPIMKVKSYVSDKHKELFELASLY*

>Glyma.13g360700.2.p sequence-type=predicted peptide transcript=Glyma.13g360700.2 locus=Glyma.13g360700 ID=Glyma.13g360700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKEGDALVDPLSNYWGLSLFPQPSFPPSKPYNSDQDLHTIHTHLRSMALRSPAKLVHQAKSIVDGNPQLFNSENSNHPTSQKTNDAEGEFRRNPRPGLGLKRPRFSMKPTKKPSVESLLPTLDLDSLKDPAEFFLAHERLENAKREIQKQLGGASFESDQDNVAARPRQRRPGLLGNNQLPIKYKHRYPKETSDDVLSSQETLGSQSLAPVTENTDKGEASMASSEKEVIDSSGTKGIELDELLDGLLHCDSEDLEGDGAITLLQERLQIKPIALEKFSVPDFPDKQMVDLKSLQGNKSKPRKALSDIDNLLKGMSMNMNKKTPLKKAVQCPVQQLASPTPPRSPFASLSLLQKHISQSKQSMDPFSAHEIDHLSSKNYSPTHMVNPELNLVRSANPSNELNAHMIEDAIAVGKASTVLDTDRNDTNSSEIPKEEKSGKSSNKLNAPSIQDIIAVGGTSLAEDTVRNGTSTSRKSMVDNSREPRFDVNILSNEPHGDMDVDVGGSGMGDNKDRSNIEAHTIEGDIAVSNTSTVLDTDINGTHTSEVSKEDNSGKSSNNLNVSLIEDIIAVYGTSLAEDTTRNCTSTFKKSMVDNSREPRFDVTLDSNEPHVNMDVDVGVSAVGDRVMDDTKDRSNIEVNASCQSEDKAENMQTFTASIPTDGMNLNVLNPLADQPNPAGYEANSVDKRARRSDDDPEHCLQEKTDGSMVPVNGQKRVKSLVQKVSKNKKLSNRHSLAAAGTSWTSGLRRSTRIRTRPLEYWKGERLVYGRVHKSLATVIGVKCISPGSDGKPIMKVKSYVSDKHKELFELASLY*

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