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Report for Sequence Feature Glyma.13g323600

Feature Type:gene_model
Chromosome:Gm13
Start:41179040
stop:41184856
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g323600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G03340.1AT JGI N/AIEA
3.6.4.6EC vesicle-fusing ATPase JGI N/AIEA
GO:0006281GO-bp DNA repair JGI N/AIEA
GO:0006310GO-bp DNA recombination JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0009378GO-mf four-way junction helicase activity JGI N/AIEA
K13525KEGG Exosome JGI N/AIEA
PTHR23077PantherFam AAA-FAMILY ATPASE JGI N/AIEA
PF02359Pfam Cell division protein 48 (CDC48), N-terminal domain JGI N/AIEA
PF02933Pfam Cell division protein 48 (CDC48), domain 2 JGI N/AIEA
PF05496Pfam Holliday junction DNA helicase RuvB P-loop domain JGI N/AIEA
PF07724Pfam AAA domain (Cdc48 subfamily) JGI N/AIEA

Proteins Associated with Glyma.13g323600
LocusGene SymbolProtein Name
CDC48 plamsma membrane-associated AAA-ATPase

Gene model name correspondences to Glyma.13g323600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g39830 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g323600
>Glyma.13g323600.1 sequence-type=CDS polypeptide=Glyma.13g323600.1.p locus=Glyma.13g323600 id=Glyma.13g323600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTCAGCAAGGCGAATCATCGGACCCGAAATCGGGGAAGAAGGACTTCTCAACCGCGATTCTGGAACGCAAAAAGTCGCCGAACCGGCTTGTCGTGGATGAGGCTGTCAACGACGACAACTCCGTGGTCACCATGCATCCCCAAACCATGGAAAAGCTTCAGCTTTTCCGAGGGGACACTATCCTCATCAAGGGTAAGAAACGGAAGGATACCATTTGCATAGCTCTTGCTGATGAGAACTGTGAGGAGCCGAAGATCAGGATGAATAAAGTTGTGAGGTCAAATTTGCGGGTTCGGCTTGGAGATGTTGTGTCTGTGCACCAGTGCCCGGATGTTAAATATGGGAAACGTGTGCACATTCTGCCTATTGATGATACCATTGAAGGTGTCACTGGCAATCTGTTTGATGCTTTCTTGAAACCCTATTTCTTGGAAGCTTACCGTCCTGTCAGAAAAGGAGATCTATTTCTTGTCCGGGGAGGGATGAGAAGTGTAGAGTTCAAGGTGGTTGAAACCGATCCTGGAGAATATTGTGTTGTTGCTCCAGACACTGAAATTTTCTGTGAGGGGGAGCCTTTGAAAAGAGAAGATGAAGAGAGACTGGATGAAGTCGGGTATGATGATGTGGGTGGTGTCAGGAAACAAATGGCTCAGATTCGTGAGTTGGTTGAGCTTCCATTGAGGCATCCACAGCTTTTTAAATCAATTGGTGTGAAACCACCCAAAGGAATTTTACTTTATGGACCCCCAGGTTCTGGGAAGACATTAATAGCAAGAGCTGTAGCTAATGAAACTGGAGCTTTTTTCTTTTGTATTAACGGACCAGAGATTATGTCCAAACTTGCTGGAGAGAGTGAAAGCAATCTCAGGAAAGCGTTTGAAGAAGCAGAAAAGAATGCACCATCCATTATCTTCATTGATGAAATTGATTCCATTGCCCCCAAGCGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAACTTTTGACTCTTATGGATGGATTAAAATCTCGTGCTCATGTTATTGTTATTGGAGCTACTAATCGTCCAAATAGCATTGACCCAGCATTGAGAAGGTTTGGTAGATTTGATAGGGAAATTGATATTGGTGTTCCCGATGAAGTTGGGAGACTTGAAGTCCTTCGCATACATACTAAAAACATGAAGCTATCTGATGATGTTGATTTAGAGAGAATTGCAAAAGATACTCATGGGTATGTTGGTGCTGACCTTGCTGCCCTTTGCACTGAAGCTGCTTTGCAATGCATTAGGGAGAAGATGGATGTAATTGACTTGGAGGATGAGACTATTGATGCAGAAGTACTGAATTCCATGGCAGTTACAAATGAGCATTTCCAGACTGCCCTTGGAACAAGCAACCCATCAGCTTTACGTGAAACTGTTGTTGAAGTGCCTAATGTCAGCTGGGAAGACATTGGAGGCCTTGAAAATGTCAAGCGTGAACTGCAAGAGACTGTACAATATCCAGTTGAGCACCCAGAAAAGTTTGAGAAGTTTGGTATGTCTCCATCTAAAGGAGTACTTTTCTATGGTCCTCCAGGATGTGGGAAAACTTTGTTAGCCAAAGCAATTGCTAATGAATGTCAAGCTAACTTCATCAGTGTGAAAGGTCCAGAATTGCTTACAATGTGGTTTGGTGAAAGTGAAGCTAATGTTAGAGAAATTTTTGACAAGGCCAGACAATCGGCTCCATGTGTCCTCTTCTTTGATGAGCTTGACTCTATTGCCACTCAGAGAGGAAGCAGTGTTGGGGATGCTGGTGGTGCGGCTGATAGAGTTCTAAATCAACTTTTGACTGAAATGGATGGCATGTCTGCCAAAAAGACTGTGTTCATAATTGGGGCAACTAACAGACCTGACATCATTGACCCAGCACTTCTTCGACCAGGCCGTCTGGATCAATTGATCTATATTCCTCTCCCTGATGAGGATTCCCGGCATCAAATCTTTAAAGCCTGCTTGAGGAAGTCACCTATCGCAAAAAATGTTGATTTGAGAGCATTGGCTAGGCACACTCAAGGGTTCAGTGGTGCTGATATTACAGAAATATGCCAGCGAGCATGCAAATATGCCATAAGAGAAAACATAGAGAAGGACATTGAGCGAGAGAGGAAGAGTAGGGAAAACCCTGAGGCCATGGATGAAGATACCGTCGACGACGAAGTTGCGGAGATCAAGGCTGCTCATTTTGAGGAGTCAATGAAGTTTGCACGGAGGAGTGTTAGTGATGCTGATATTCGCAAGTATCAGGCATTTGCTCAGACCTTACAGCAATCAAGAGGGTTTGGAAGTGAATTTAGGTTTCCAGAGTCTGGAGATAGGACTACTACTGGATCTGACCCCTTTGCAGCTTCTGCTGGTGGGGCTGACGAAGATGATCTATATAGTTAG

>Glyma.13g323600.2 sequence-type=CDS polypeptide=Glyma.13g323600.2.p locus=Glyma.13g323600 id=Glyma.13g323600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCATCCCCAAACCATGGAAAAGCTTCAGCTTTTCCGAGGGGACACTATCCTCATCAAGGGTAAGAAACGGAAGGATACCATTTGCATAGCTCTTGCTGATGAGAACTGTGAGGAGCCGAAGATCAGGATGAATAAAGTTGTGAGGTCAAATTTGCGGGTTCGGCTTGGAGATGTTGTGTCTGTGCACCAGTGCCCGGATGTTAAATATGGGAAACGTGTGCACATTCTGCCTATTGATGATACCATTGAAGGTGTCACTGGCAATCTGTTTGATGCTTTCTTGAAACCCTATTTCTTGGAAGCTTACCGTCCTGTCAGAAAAGGAGATCTATTTCTTGTCCGGGGAGGGATGAGAAGTGTAGAGTTCAAGGTGGTTGAAACCGATCCTGGAGAATATTGTGTTGTTGCTCCAGACACTGAAATTTTCTGTGAGGGGGAGCCTTTGAAAAGAGAAGATGAAGAGAGACTGGATGAAGTCGGGTATGATGATGTGGGTGGTGTCAGGAAACAAATGGCTCAGATTCGTGAGTTGGTTGAGCTTCCATTGAGGCATCCACAGCTTTTTAAATCAATTGGTGTGAAACCACCCAAAGGAATTTTACTTTATGGACCCCCAGGTTCTGGGAAGACATTAATAGCAAGAGCTGTAGCTAATGAAACTGGAGCTTTTTTCTTTTGTATTAACGGACCAGAGATTATGTCCAAACTTGCTGGAGAGAGTGAAAGCAATCTCAGGAAAGCGTTTGAAGAAGCAGAAAAGAATGCACCATCCATTATCTTCATTGATGAAATTGATTCCATTGCCCCCAAGCGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAACTTTTGACTCTTATGGATGGATTAAAATCTCGTGCTCATGTTATTGTTATTGGAGCTACTAATCGTCCAAATAGCATTGACCCAGCATTGAGAAGGTTTGGTAGATTTGATAGGGAAATTGATATTGGTGTTCCCGATGAAGTTGGGAGACTTGAAGTCCTTCGCATACATACTAAAAACATGAAGCTATCTGATGATGTTGATTTAGAGAGAATTGCAAAAGATACTCATGGGTATGTTGGTGCTGACCTTGCTGCCCTTTGCACTGAAGCTGCTTTGCAATGCATTAGGGAGAAGATGGATGTAATTGACTTGGAGGATGAGACTATTGATGCAGAAGTACTGAATTCCATGGCAGTTACAAATGAGCATTTCCAGACTGCCCTTGGAACAAGCAACCCATCAGCTTTACGTGAAACTGTTGTTGAAGTGCCTAATGTCAGCTGGGAAGACATTGGAGGCCTTGAAAATGTCAAGCGTGAACTGCAAGAGACTGTACAATATCCAGTTGAGCACCCAGAAAAGTTTGAGAAGTTTGGTATGTCTCCATCTAAAGGAGTACTTTTCTATGGTCCTCCAGGATGTGGGAAAACTTTGTTAGCCAAAGCAATTGCTAATGAATGTCAAGCTAACTTCATCAGTGTGAAAGGTCCAGAATTGCTTACAATGTGGTTTGGTGAAAGTGAAGCTAATGTTAGAGAAATTTTTGACAAGGCCAGACAATCGGCTCCATGTGTCCTCTTCTTTGATGAGCTTGACTCTATTGCCACTCAGAGAGGAAGCAGTGTTGGGGATGCTGGTGGTGCGGCTGATAGAGTTCTAAATCAACTTTTGACTGAAATGGATGGCATGTCTGCCAAAAAGACTGTGTTCATAATTGGGGCAACTAACAGACCTGACATCATTGACCCAGCACTTCTTCGACCAGGCCGTCTGGATCAATTGATCTATATTCCTCTCCCTGATGAGGATTCCCGGCATCAAATCTTTAAAGCCTGCTTGAGGAAGTCACCTATCGCAAAAAATGTTGATTTGAGAGCATTGGCTAGGCACACTCAAGGGTTCAGTGGTGCTGATATTACAGAAATATGCCAGCGAGCATGCAAATATGCCATAAGAGAAAACATAGAGAAGGACATTGAGCGAGAGAGGAAGAGTAGGGAAAACCCTGAGGCCATGGATGAAGATACCGTCGACGACGAAGTTGCGGAGATCAAGGCTGCTCATTTTGAGGAGTCAATGAAGTTTGCACGGAGGAGTGTTAGTGATGCTGATATTCGCAAGTATCAGGCATTTGCTCAGACCTTACAGCAATCAAGAGGGTTTGGAAGTGAATTTAGGTTTCCAGAGTCTGGAGATAGGACTACTACTGGATCTGACCCCTTTGCAGCTTCTGCTGGTGGGGCTGACGAAGATGATCTATATAGTTAG
Predicted protein sequences of Glyma.13g323600
>Glyma.13g323600.1.p sequence-type=predicted peptide transcript=Glyma.13g323600.1 locus=Glyma.13g323600 id=Glyma.13g323600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSQQGESSDPKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGDTILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPGEYCVVAPDTEIFCEGEPLKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPESGDRTTTGSDPFAASAGGADEDDLYS*

>Glyma.13g323600.2.p sequence-type=predicted peptide transcript=Glyma.13g323600.2 locus=Glyma.13g323600 id=Glyma.13g323600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHPQTMEKLQLFRGDTILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPGEYCVVAPDTEIFCEGEPLKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPESGDRTTTGSDPFAASAGGADEDDLYS*






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