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Report for Sequence Feature Glyma.13g321500

Feature Type:gene_model
Chromosome:Gm13
Start:41593848
stop:41597456
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.13g321500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G02860.1AT Phenazine biosynthesis PhzC/PhzF protein JGI N/AIEA
GO:0009058GO-bp biosynthetic process EnsemblGenomesN/AIEA
GO:0009058GO-bp biosynthetic process JGI N/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
KOG3033 KOG Predicted PhzC/PhzF-type epimerase JGI N/AIEA
PTHR13774Panther PHENAZINE BIOSYNTHESIS PROTEIN JGI N/AIEA
PTHR13774:SF12Panther JGI N/AIEA
PF02567PFAM Phenazine biosynthesis-like protein JGI N/AIEA
GN7V-66922SoyCyc9-rxn trans-2,3-dihydro-3-hydroxyanthranilate isomerase Plant Metabolic Network ISS

Expression Patterns of Glyma.13g321500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.13g321500 not represented in the dataset
Glyma.13g321500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.13g321500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g39580 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g321500
>Glyma.13g321500.1 sequence-type=CDS polypeptide=Glyma.13g321500.1.p locus=Glyma.13g321500 ID=Glyma.13g321500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCAATGGCAAAGAAACCCGTGAAATACTATGTGGTGGACGCGTTTACTGAGTCAGCATTCAAGGGGAACCCTGCATCTGTGTGTTTCTTAGAGGAAGAGAGAGATGAGGAGTGGCTGCAAGCAGTAGCCGCTGAATTCAATATCTCTGAGACTTGTTACTTATCACGCATCACCCACTCGCTCCATGGAATCTCTAATCCCCGTTTTCGTCTCAGATGGTTTACTCCTGTTGCTGAGGTTAAACTTTGTGGTCATGCCACATTAGCTGCTGCGCACGCACTATTTTCATCTGATTTGGTGGATACCGATGTTATTGAATTTGTGACACTATCTGGAGTATTAACTGCCAAAAAGATTCCAGCCATCCATATCACCAGTGCCTCAGACTCACAAAACGGTGAAGCTCAGGATGGATTTTATATTGAATTGGATTTTCCGGTTGATCCTGTTACAGAATTCAGCTTTGATGAGAGTACTTCACTACTTTCTGAGGCATTGAACGGTGCATCCATAATTGATGTAAAGAGGACACAAATTGGAGATGACTTACTTGTTGAACTCACATCTGTAAAAGCTGTCTCAGAACTACAGCCAAAACTTGATGCAATAGTTAGATGTCCTGGAAGGGGGGTAATTGTTTCAGCGATTGCTCCTCCAGGCTCGGGATTTGACTTCTATAGTCGATTCTTCTGCCCAAAATTGGGAATCAATGAGGATCCTGTTTGTGGGAGTGCACATTGTGCATTGGCATCTTATTGGAGCAACAAGCTTGGGAAGTTCGATTTGAATGCTTATCAGGCATCATCCAGAGGGGGAGTTCTCAATATTCATCTTGATGAAAAGATCCAGAGAGTGCTTTTGCGTGGGAAGGCTGTTACGGTGATGGAAGGCTGTGTTCTGGTCTAG
Predicted protein sequences of Glyma.13g321500
>Glyma.13g321500.1.p sequence-type=predicted peptide transcript=Glyma.13g321500.1 locus=Glyma.13g321500 ID=Glyma.13g321500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSMAKKPVKYYVVDAFTESAFKGNPASVCFLEEERDEEWLQAVAAEFNISETCYLSRITHSLHGISNPRFRLRWFTPVAEVKLCGHATLAAAHALFSSDLVDTDVIEFVTLSGVLTAKKIPAIHITSASDSQNGEAQDGFYIELDFPVDPVTEFSFDESTSLLSEALNGASIIDVKRTQIGDDLLVELTSVKAVSELQPKLDAIVRCPGRGVIVSAIAPPGSGFDFYSRFFCPKLGINEDPVCGSAHCALASYWSNKLGKFDLNAYQASSRGGVLNIHLDEKIQRVLLRGKAVTVMEGCVLV*






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