SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g298100

Feature Type:gene_model
Chromosome:Gm13
Start:39043110
stop:39046150
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g298100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G28250.1AT ATEXPB3,ATHEXP BETA 1.6,EXPB3 JGI N/AIEA
PTHR31692PantherFam EXPANSIN-B3 JGI N/AIEA
PTHR31692:SF5PantherFam EXPANSIN-B3 JGI N/AIEA
PF01357Pfam Expansin C-terminal domain JGI N/AIEA
PF03330Pfam Lytic transglycolase JGI N/AIEA

Proteins Associated with Glyma.13g298100
LocusGene SymbolProtein Name
EXPB9 expansin-B3-like

Gene model name correspondences to Glyma.13g298100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g37395 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g298100
>Glyma.13g298100.1 sequence-type=CDS polypeptide=Glyma.13g298100.1.p locus=Glyma.13g298100 id=Glyma.13g298100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAGTGCCAGCGCTTCTCCGCCGTGCTTTTTCTAAGCTTATGCTTTAGAATTGCGCAAGTATACGCGCACGGGGATTCTGATCTGGACGAACATTGGTACACCGGAACCGCCACGTGGTACGGCGACCCCGAAGGCAACGGTAGCAACGGAGGGGCATGTGGGTATGGTACGTTGGTGGACGTGAAGCCTTTGAAGGGAAGGGTGGCAGCAGTGGGGCCAGTGCTGTTTAAGAAGGGTGAAGGTTGTGGTGCTTGCTATAAGGTCAAGTGTTTGGACCGTAGCATTTGTTCCAAACGGGCAGTGACGGTTATAATAACCGATGAGTGCCCGGGCTGTCGGACTGACCGAACGCACTTCGACCTCAGTGGCTCTGCCTTTGGCCGCATGGCGCTTTCGGGTGAAAACGTTAAGCTCAGAAACCGAGGTGAAATCCCAATCCTTTATCGAAGAGCATCATGCAAGTATGGTGGCAAAAACATTGTCTTCCATGTCAATGAAGGTTCCACACCTTTTTGGCTATCTCTTCAGGTGGAGTTTCAAAATGGAGATGGGGTGATTGGCTCCATGCATATACAACAGGCAGGGTCGAGTGAGTGGCTGCAGATGAAGCGTGAATGGGGTGCAAATTGGTGCATCATTAAGGGGCCATTAAAAGGACCTTTCTCTGTTAAGCTAAGCACATCCACAGGGAAAAGCCTCATTGCCAAAGATGTTATTCCAAGCAATTGGGCTCCAAAAGCCAGTTATACTTCTCGCTTAAATTTCCTGTCTTAA
Predicted protein sequences of Glyma.13g298100
>Glyma.13g298100.1.p sequence-type=predicted peptide transcript=Glyma.13g298100.1 locus=Glyma.13g298100 id=Glyma.13g298100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQCQRFSAVLFLSLCFRIAQVYAHGDSDLDEHWYTGTATWYGDPEGNGSNGGACGYGTLVDVKPLKGRVAAVGPVLFKKGEGCGACYKVKCLDRSICSKRAVTVIITDECPGCRTDRTHFDLSGSAFGRMALSGENVKLRNRGEIPILYRRASCKYGGKNIVFHVNEGSTPFWLSLQVEFQNGDGVIGSMHIQQAGSSEWLQMKREWGANWCIIKGPLKGPFSVKLSTSTGKSLIAKDVIPSNWAPKASYTSRLNFLS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo