SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g282000

Feature Type:gene_model
Chromosome:Gm13
Start:37720872
stop:37722805
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g282000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G54270.1AT LHCB3,LHCB3*1 JGI N/AIEA
GO:0009765GO-bp photosynthesis, light harvesting JGI N/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
K08914KEGG Photosynthesis proteins JGI N/AIEA
PTHR21649PantherFam CHLOROPHYLL A/B BINDING PROTEIN JGI N/AIEA
PF00504Pfam Chlorophyll A-B binding protein JGI N/AIEA

Gene model name correspondences to Glyma.13g282000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g35800 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g282000
>Glyma.13g282000.1 sequence-type=CDS polypeptide=Glyma.13g282000.1.p locus=Glyma.13g282000 id=Glyma.13g282000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGCAACATTGATGGCAGCAACAAGTTCTGGCACTCTTAAAGCAACTCCTTTCCTAGGCCAAGGCAAGGGTGCCAATGCCAATGCTCTTAGGGATGTTGTTTCCATGGGAACTGGGAAGTACACCATGGGCAATGATTTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACCCCTTCATACTTGAAAGGAGAATTCCCAGGGGATTATGGATGGGACACTGCTGGCTTATCTGCTGACCCGGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTTATCCATGGGAGATGGGCCATGCTTGGAGCACTAGGATGCATCACCCCAGAGGTGCTAGAGAAGTGGTTGAGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCTGGAGCCCAAATATTCTCAGAAGGTGGGCTTGACTATTTGGGGAACCCAAACCTTGTCCATGCACAAAGCATCCTGGCAGTGCTGGGCTTCCAAGTTATCCTAATGGGCCTTGTTGAAGGGTACCGCATCAATGGGCTTGATGGGGTGGGAGAGGGCAATGACCTCTACCCTGGGGGCCAGTACTTTGACCCACTGGGCCTTGCTGATGACCCAGTCACTTTTGCTGAGCTCAAAGTCAAGGAGATCAAGAATGGAAGGCTGGCCATGTTCTCTATGTTTGGATTCTTTGTTCAAGCTATTGTCACTGGAAAAGGCCCATTGGAGAACCTCTTGGACCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACTAAGTTTGCCCCAGGATCTTAA
Predicted protein sequences of Glyma.13g282000
>Glyma.13g282000.1.p sequence-type=predicted peptide transcript=Glyma.13g282000.1 locus=Glyma.13g282000 id=Glyma.13g282000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAATLMAATSSGTLKATPFLGQGKGANANALRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo