|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G78870.2 | AT | ubiquitin-conjugating enzyme 35 | JGI | N/A | IEA |
GO:0006301 | GO-bp | postreplication repair | EnsemblGenomes | N/A | IEA |
GO:0006511 | GO-bp | ubiquitin-dependent protein catabolic process | EnsemblGenomes | N/A | IEA |
GO:0010039 | GO-bp | response to iron ion | EnsemblGenomes | N/A | IEA |
GO:0010053 | GO-bp | root epidermal cell differentiation | EnsemblGenomes | N/A | IEA |
GO:0016567 | GO-bp | protein ubiquitination | EnsemblGenomes | N/A | IEA |
GO:0046686 | GO-bp | response to cadmium ion | EnsemblGenomes | N/A | IEA |
GO:0070534 | GO-bp | protein K63-linked ubiquitination | EnsemblGenomes | N/A | IEA |
GO:0005634 | GO-cc | nucleus | EnsemblGenomes | N/A | IEA |
GO:0005737 | GO-cc | cytoplasm | EnsemblGenomes | N/A | IEA |
GO:0000166 | GO-mf | nucleotide binding | EnsemblGenomes | N/A | IEA |
GO:0004842 | GO-mf | ubiquitin-protein transferase activity | EnsemblGenomes | N/A | IEA |
GO:0005524 | GO-mf | ATP binding | EnsemblGenomes | N/A | IEA |
GO:0016740 | GO-mf | transferase activity | EnsemblGenomes | N/A | IEA |
GO:0016881 | GO-mf | acid-amino acid ligase activity | JGI | N/A | IEA |
GO:0031625 | GO-mf | ubiquitin protein ligase binding | EnsemblGenomes | N/A | IEA |
GO:0061630 | GO-mf | ubiquitin protein ligase activity | EnsemblGenomes | N/A | IEA |
KOG0417 | KOG | Ubiquitin-protein ligase | JGI | N/A | IEA |
PTHR24067 | Panther | UBIQUITIN-CONJUGATING ENZYME E2 | JGI | N/A | IEA |
PTHR24067:SF30 | Panther | JGI | N/A | IEA | |
PF00179 | PFAM | Ubiquitin-conjugating enzyme | JGI | N/A | IEA |
Glyma.13g270800 not represented in the dataset |
Glyma.13g270800 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma13g34600 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.13g270800.1 sequence-type=CDS polypeptide=Glyma.13g270800.1.p locus=Glyma.13g270800 ID=Glyma.13g270800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCCAACAGTAACCTCCCTCGAAGAATCATCAAGGAAACGCAGCGTTTGCTCAGTGAGCCAGCACCTGGAATTAGTGCGTCCCCTTCGGAAGACAATATGCGGTATTTCAATGTGATGATCCTTGGCCCAACTCAGTCGCCTTATGAAGGGGGAGTTTTCAAGTTGGAATTATTTTTGCCAGAAGAATATCCAATGGCTGCTCCAAAGGTTAGGTTTCTGACAAAAATATATCATCCAAACATTGATAAGCTTGGCAGGATATGTCTTGACATTCTGAAAGATAAGTGGAGTCCTGCCCTTCAGATTCGCACTGTACTTTTGAGTATTCAAGCTCTTCTAAGTGCACCAAACCCAGATGATCCGCTTTCTGAGAACATTGCCAAGCATTGGAAATCTAATGAGGCCGAGGCAGTTGAAACGGCCAAGGAATGGACCCGGTTATATGCTAGCGGCGCTTGA
>Glyma.13g270800.1.p sequence-type=predicted peptide transcript=Glyma.13g270800.1 locus=Glyma.13g270800 ID=Glyma.13g270800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||