Report for Sequence Feature Glyma.13g259400
| Feature Type: | gene_model |
| Chromosome: | Gm13 |
| Start: | 35785840 |
| stop: | 35787888 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
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Annotations for Glyma.13g259400
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT1G78440.1 | AT |
ATGA2OX1,GA2OX1 |
JGI | N/A | IEA |
| 1.14.11.13 | EC |
gibberellin 2beta-dioxygenase |
JGI | N/A | IEA |
| GO:0055114 | GO-bp |
obsolete oxidation-reduction process |
JGI | N/A | IEA |
| GO:0016491 | GO-mf |
oxidoreductase activity |
JGI | N/A | IEA |
| K04125 | KEGG |
Diterpenoid biosynthesis |
JGI | N/A | IEA |
| KOG0143 |
KOG |
Iron/ascorbate family oxidoreductases |
JGI | N/A | IEA |
| PTHR10209 | PantherFam |
OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN |
JGI | N/A | IEA |
| PF03171 | Pfam |
2OG-Fe(II) oxygenase superfamily |
JGI | N/A | IEA |
| PF14226 | Pfam |
non-haem dioxygenase in morphine synthesis N-terminal |
JGI | N/A | IEA |
Proteins Associated with Glyma.13g259400
| Locus | Gene Symbol | Protein Name |
|---|
| | GA2OX6 | gibberellin 2-beta-dioxygenase 6 |
Gene model name correspondences to Glyma.13g259400 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma13g33290 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.13g259400
>Glyma.13g259400.1 sequence-type=CDS polypeptide=Glyma.13g259400.1.p locus=Glyma.13g259400 id=Glyma.13g259400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGTTGTTGTCCAAAGCAACAACAGAACAATACTCCTACATTAAGAACTGCATGCCAACCAAATTTTCCTCAACAATTCCCATAGTGGACCTCTCCAAACCTGATGCAAAGACCCTTATAGTGAAGGCTTGTGAGGAGTTTGGATTCTTCAAAGTCATCAATCATGGTGTCTCCATGGAAGCTATATCCGAATTGGAATATGAAGCCTTCAAATTCTTCTCTATGTCACTCAATGAAAAGGAAAAAGTAGGACCTCCCAATCCATTTGGGTATGGTAGCAAGAAAATTGGACACAATGGGGACGTTGGTTGGATTGAGTACCTTCTTCTCAACACCAATCAAGAACACAACTTCTCTGTTTATGGCAAAAACCCTGAGAAATTCAGGTGTCTGTTGAACAGTTACATGTCTTCTGTGAGGAAGATGGCATGTGAGATTCTTGAGTTGATGGCAGAAGGGTTGAAGATTCAGCAAAAGGATGTGTTTAGCAAGCTTCTAATGGATAAACAAAGTGACTCTATTTTCAGGGTGAATCATTACCCTGCTTGTCCTGAAATGACTCTGAATGATCAGAACTTGATTGGGTTTGGAGAACACACAGACCCACAAATCATCTCTCTGTTAAGATCCAACAACACTTCAGGCCTTCAGATTTATCTTAGAGATGGAAATTGGATTTCAGTCCCACCAGATGACAAATCCTTTTTTATTAACGTTGGTGATTCTCTTCAGGTTATGACAAATGGAAGGTTCCGAAGTGTGAGACACAGAGTGTTGGCAAATGGGTTCAAGTCCAGGCTTTCAATGATTTACTTTGGAGGTCCACCTTTGAGTGAGAAAATAGCACCATTATCCTCTCTCATGAAAGGAAAAGAAAGTCTATATAAAGAGTTTACCTGGTTTGAGTACAAAAAATCAATCTACGGTTCAAGATTATCTAAAAATAGACTTGAACATTTTGAAAGAATTGCAGCTTCGTAA
>Glyma.13g259400.2 sequence-type=CDS polypeptide=Glyma.13g259400.2.p locus=Glyma.13g259400 id=Glyma.13g259400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGTTGTTGTCCAAAGCAACAACAGAACAATACTCCTACATTAAGAACTGCATGCCAACCAAATTTTCCTCAACAATTCCCATAGTGGACCTCTCCAAACCTGATGCAAAGACCCTTATAGTGAAGGCTTGTGAGGAGTTTGGATTCTTCAAAGTCATCAATCATGGTGTCTCCATGGAAGCTATATCCGAATTGGAATATGAAGCCTTCAAATTCTTCTCTATGTCACTCAATGAAAAGGAAAAAGTAGGACCTCCCAATCCATTTGGGTATGGTAGCAAGAAAATTGGACACAATGGGGACGTTGGTTGGATTGAGTACCTTCTTCTCAACACCAATCAAGAACACAACTTCTCTGTTTATGGCAAAAACCCTGAGAAATTCAGGTGTCTGTTGAACAGTTACATGTCTTCTGTGAGGAAGATGGCATGTGAGATTCTTGAGTTGATGGCAGAAGGGTTGAAGATTCAGCAAAAGGATGTGTTTAGCAAGCTTCTAATGGATAAACAAAGTGACTCTATTTTCAGGGTGAATCATTACCCTGCTTGTCCTGAAATGACTCTGAATGATCAGAACTTGATTGGGTTTGGAGAACACACAGACCCACAAATCATCTCTCTGTTAAGATCCAACAACACTTCAGGCCTTCAGATTTATCTTAGAGATGGAAATTGGATTTCAGTCCCACCAGATGACAAATCCTTTTTTATTAACGTTGGTGATTCTCTTCAGGTACAACATAAAGCATGCTATTGA
Predicted protein sequences of Glyma.13g259400
>Glyma.13g259400.1.p sequence-type=predicted peptide transcript=Glyma.13g259400.1 locus=Glyma.13g259400 id=Glyma.13g259400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVLLSKATTEQYSYIKNCMPTKFSSTIPIVDLSKPDAKTLIVKACEEFGFFKVINHGVSMEAISELEYEAFKFFSMSLNEKEKVGPPNPFGYGSKKIGHNGDVGWIEYLLLNTNQEHNFSVYGKNPEKFRCLLNSYMSSVRKMACEILELMAEGLKIQQKDVFSKLLMDKQSDSIFRVNHYPACPEMTLNDQNLIGFGEHTDPQIISLLRSNNTSGLQIYLRDGNWISVPPDDKSFFINVGDSLQVMTNGRFRSVRHRVLANGFKSRLSMIYFGGPPLSEKIAPLSSLMKGKESLYKEFTWFEYKKSIYGSRLSKNRLEHFERIAAS*
>Glyma.13g259400.2.p sequence-type=predicted peptide transcript=Glyma.13g259400.2 locus=Glyma.13g259400 id=Glyma.13g259400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVLLSKATTEQYSYIKNCMPTKFSSTIPIVDLSKPDAKTLIVKACEEFGFFKVINHGVSMEAISELEYEAFKFFSMSLNEKEKVGPPNPFGYGSKKIGHNGDVGWIEYLLLNTNQEHNFSVYGKNPEKFRCLLNSYMSSVRKMACEILELMAEGLKIQQKDVFSKLLMDKQSDSIFRVNHYPACPEMTLNDQNLIGFGEHTDPQIISLLRSNNTSGLQIYLRDGNWISVPPDDKSFFINVGDSLQVQHKACY*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
