Report for Sequence Feature Glyma.13g237000
Feature Type: gene_model
Chromosome: Gm13
Start: 34742116
stop: 34743394
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.13g237000
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G28330.1 AT
dormancy-associated protein-like 1
JGI N/A IEA
AT1G28330.4 AT
dormancy-associated protein-like 1
JGI N/A IEA
AT2G33830.1 AT
Dormancy/auxin associated family protein
JGI N/A IEA
PF05564 PFAM
Dormancy/auxin associated protein
JGI N/A IEA
Expression Patterns of Glyma.13g237000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.13g237000
Paralog Evidence Comments
Glyma.15g076500 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.13g237000 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma13g31060 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.13g237000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.13g237000.2 sequence-type=transcript locus=Glyma.13g237000 ID=Glyma.13g237000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACACTTGGAAGCAGCAAAACACTCCATCCCACTTTTACTAACGATCACCCTTCTATAAATAGAACCTGCACAACCTCATTACTCACTTTTTCTTTTCATCCATCGATTAAAGACTTGCTTCCAAGATGGTTCTGCTAGAGAAGCTCTGGGATGACGTTGTTGCTGGCCCTCAACCTGAGCGTGGCCTTGGCAAGCTCAGAAAACTCACCACCCTCAAAACTAGAGACAGTAGCAAGCTGCAGAAGACGTTGTCGATGCCGTCGACACCGACAATCCCGATGACTCCCACGACTCCAACGACACCGGGATCCGCGCGTAAAGCTGACAACGTTTGGAGGAGCGTCTTCCATCCTGGGAGCAACTCCGCCACAAAGACCATCGGTGCTCAGATGTTTGACAAACCACTTCCCAACACTCCCACTGTCTACGACTGGCTGTACAGTGGGGAGACCAGAAGCAGGCACCGCTGAAAGGATAAGCTAAGAAAACCGTGGGTTGCATGTAAATATTGTCGTTTTTCGTTAAGCACCTGCCACGTTTGAATCTACTACTACCATTATGCGTCGGAAATTAATTGCTCTGTTGCTGACTCAAATATATATTACTAGCGTGTTTGATTTTGAGCAAGTGAATGTAAAATGCTAAATAATTACCGTAATTAGCATCAGTATGCTATGTTTTGTTAAGCCAGATCTGCCTTCAACTTTGGCAATTGGTTAATCTTTTTCTCCCTCTGTTAAATGATTAATATATATTAAAATAAATAAATATTATATTTTCTAAATCTGTAACTAGTCAGTGCCATCTGTATTTATGCAACTTCAACTCAACTAAAATATAATTACATATGTTCAAAGTT
>Glyma.13g237000.3 sequence-type=transcript locus=Glyma.13g237000 ID=Glyma.13g237000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACACTTGGAAGCAGCAAAACACTCCATCCCACTTTTACTAACGATCACCCTTCTATAAATAGAACCTGCACAACCTCATTACTCACTTTTTCTTTTCATCCATCGATTAAAGACTTGCTTCCAAGATGGTTCTGCTAGAGAAGCTCTGGGATGACGTTGTTGCTGGCCCTCAACCTGAGCGTGGCCTTGGCAAGCTCAGAAAACTCACCACCCTCAAAACTATTGATGAAGGAGACAGTAGCAAGCTGCAGAAGACGTTGTCGATGCCGTCGACACCGACAATCCCGATGACTCCCACGACTCCAACGACACCGGGATCCGCGCGTAAAGCTGACAACGTTTGGAGGAGCGTCTTCCATCCTGGGAGCAACTCCGCCACAAAGACCATCGGTGCTCAGATGTTTGACAAACCACTTCCCAACACTCCCACTGTCTACGACTGGTAATATTATTGTTTCTTCTTTTAATAAAAAAAACTTTACAAATTATGAATTCATTTTTGGCAACCTTTGATTTGTTGGCGTTGCTACGTTCTTTTGGCCATAACTCATCAACAACTTTGCATGCATACATAATAACAAGTTGATTCATATTTTTTGTTCTTATTAAAAGAAATTACAAGGGGTGATTTTTGTCTGCTAAGTTGTAAAAAATATGTATAATAGGATTGGGGTGATGTGAGCCGTTAGATCTTGTGAGAAATCGACGGTTGATATGTATGTATATTGCGGTATAATGAAGCGAGTTGTATGTGATTGCAGGCTGTACAGTGGGGAGACCAGAAGCAGGCACCGCTGAAAGGATAAGCTAAGAAAACCGTGGGTTGCATGTAAATATTGTCGTTTTTCGTTAAGCACCTGCCACGTTTGAATCTACTACTACCATTATGCGTCGGAAATTAATTGCTCTGTTGCTGACTCAAATATATATTACTAGCGTGTTTGATTTTGAGCAAGTGAATGTAAAATGCTAAATAATTACCGTAATTAGCATCAGTATGCTATGTTTTGTTAAGCCAGATCTGCCTTCAACTTTGGCAATTGGTTAATCTTTTTCTCCCTCTGTTAAATGATTAATATATATTAAAATAAATAAATATTATATTTTCTAAATCTGTAACTAGTCAGTGCCATCTGTATTTATGCAACTTCAACTCAACTAAAATATAATTACATATGTTCAAAGTT
>Glyma.13g237000.4 sequence-type=transcript locus=Glyma.13g237000 ID=Glyma.13g237000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACACTTGGAAGCAGCAAAACACTCCATCCCACTTTTACTAACGATCACCCTTCTATAAATAGAACCTGCACAACCTCATTACTCACTTTTTCTTTTCATCCATCGATTAAAGACTTGCTTCCAAGATGGTTCTGCTAGAGAAGCTCTGGGATGACGTTGTTGCTGGCCCTCAACCTGAGCGTGGCCTTGGCAAGCTCAGAAAACTCACCACCCTCAAAACTATGTTTGATTGTTGATATAGTTGATGAAGGAGACAGTAGCAAGCTGCAGAAGACGTTGTCGATGCCGTCGACACCGACAATCCCGATGACTCCCACGACTCCAACGACACCGGGATCCGCGCGTAAAGCTGACAACGTTTGGAGGAGCGTCTTCCATCCTGGGAGCAACTCCGCCACAAAGACCATCGGTGCTCAGATGTTTGACAAACCACTTCCCAACACTCCCACTGTCTACGACTGGCTGTACAGTGGGGAGACCAGAAGCAGGCACCGCTGAAAGGATAAGCTAAGAAAACCGTGGGTTGCATGTAAATATTGTCGTTTTTCGTTAAGCACCTGCCACGTTTGAATCTACTACTACCATTATGCGTCGGAAATTAATTGCTCTGTTGCTGACTCAAATATATATTACTAGCGTGTTTGATTTTGAGCAAGTGAATGTAAAATGCTAAATAATTACCGTAATTAGCATCAGTATGCTATGTTTTGTTAAGCCAGATCTGCCTTCAACTTTGGCAATTGGTTAATCTTTTTCTCCCTCTGTTAAATGATTAATATATATTAAAATAAATAAATATTATATTTTCTAAATCTGTAACTAGTCAGTGCCATCTGTATTTATGCAACTTCAACTCAACTAAAATATAATTACATATGTTCAAAGTT
Coding sequences of Glyma.13g237000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.13g237000.1 sequence-type=CDS polypeptide=Glyma.13g237000.1.p locus=Glyma.13g237000 ID=Glyma.13g237000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTCTGCTAGAGAAGCTCTGGGATGACGTTGTTGCTGGCCCTCAACCTGAGCGTGGCCTTGGCAAGCTCAGAAAACTCACCACCCTCAAAACTATTGATGAAGGAGACAGTAGCAAGCTGCAGAAGACGTTGTCGATGCCGTCGACACCGACAATCCCGATGACTCCCACGACTCCAACGACACCGGGATCCGCGCGTAAAGCTGACAACGTTTGGAGGAGCGTCTTCCATCCTGGGAGCAACTCCGCCACAAAGACCATCGGTGCTCAGATGTTTGACAAACCACTTCCCAACACTCCCACTGTCTACGACTGGCTGTACAGTGGGGAGACCAGAAGCAGGCACCGCTGA
>Glyma.13g237000.2 sequence-type=CDS polypeptide=Glyma.13g237000.2.p locus=Glyma.13g237000 ID=Glyma.13g237000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTCTGCTAGAGAAGCTCTGGGATGACGTTGTTGCTGGCCCTCAACCTGAGCGTGGCCTTGGCAAGCTCAGAAAACTCACCACCCTCAAAACTAGAGACAGTAGCAAGCTGCAGAAGACGTTGTCGATGCCGTCGACACCGACAATCCCGATGACTCCCACGACTCCAACGACACCGGGATCCGCGCGTAAAGCTGACAACGTTTGGAGGAGCGTCTTCCATCCTGGGAGCAACTCCGCCACAAAGACCATCGGTGCTCAGATGTTTGACAAACCACTTCCCAACACTCCCACTGTCTACGACTGGCTGTACAGTGGGGAGACCAGAAGCAGGCACCGCTGA
>Glyma.13g237000.3 sequence-type=CDS polypeptide=Glyma.13g237000.3.p locus=Glyma.13g237000 ID=Glyma.13g237000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTCTGCTAGAGAAGCTCTGGGATGACGTTGTTGCTGGCCCTCAACCTGAGCGTGGCCTTGGCAAGCTCAGAAAACTCACCACCCTCAAAACTATTGATGAAGGAGACAGTAGCAAGCTGCAGAAGACGTTGTCGATGCCGTCGACACCGACAATCCCGATGACTCCCACGACTCCAACGACACCGGGATCCGCGCGTAAAGCTGACAACGTTTGGAGGAGCGTCTTCCATCCTGGGAGCAACTCCGCCACAAAGACCATCGGTGCTCAGATGTTTGACAAACCACTTCCCAACACTCCCACTGTCTACGACTGGTAA
>Glyma.13g237000.4 sequence-type=CDS polypeptide=Glyma.13g237000.4.p locus=Glyma.13g237000 ID=Glyma.13g237000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACGTTGTTGCTGGCCCTCAACCTGAGCGTGGCCTTGGCAAGCTCAGAAAACTCACCACCCTCAAAACTATGTTTGATTGTTGATATAGTTGATGAAGGAGACAGTAGCAAGCTGCAGAAGACGTTGTCGATGCCGTCGACACCGACAATCCCGATGACTCCCACGACTCCAACGACACCGGGATCCGCGCGTAAAGCTGACAACGTTTGGAGGAGCGTCTTCCATCCTGGGAGCAACTCCGCCACAAAGACCATCGGTGCTCAGATGTTTGACAAACCACTTCCCAACACTCCCACTGTCTACGACTGGCTGTACAGTGGGGAGACCAGAAGCAGGCACCGCTGA
Predicted protein sequences of Glyma.13g237000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.13g237000.1.p sequence-type=predicted peptide transcript=Glyma.13g237000.1 locus=Glyma.13g237000 ID=Glyma.13g237000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVLLEKLWDDVVAGPQPERGLGKLRKLTTLKTIDEGDSSKLQKTLSMPSTPTIPMTPTTPTTPGSARKADNVWRSVFHPGSNSATKTIGAQMFDKPLPNTPTVYDWLYSGETRSRHR*
>Glyma.13g237000.2.p sequence-type=predicted peptide transcript=Glyma.13g237000.2 locus=Glyma.13g237000 ID=Glyma.13g237000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVLLEKLWDDVVAGPQPERGLGKLRKLTTLKTRDSSKLQKTLSMPSTPTIPMTPTTPTTPGSARKADNVWRSVFHPGSNSATKTIGAQMFDKPLPNTPTVYDWLYSGETRSRHR*
>Glyma.13g237000.3.p sequence-type=predicted peptide transcript=Glyma.13g237000.3 locus=Glyma.13g237000 ID=Glyma.13g237000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVLLEKLWDDVVAGPQPERGLGKLRKLTTLKTIDEGDSSKLQKTLSMPSTPTIPMTPTTPTTPGSARKADNVWRSVFHPGSNSATKTIGAQMFDKPLPNTPTVYDW*
>Glyma.13g237000.4.p sequence-type=predicted peptide transcript=Glyma.13g237000.4 locus=Glyma.13g237000 ID=Glyma.13g237000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTLLLALNLSVALASSENSPPSKLCLIVDIVDEGDSSKLQKTLSMPSTPTIPMTPTTPTTPGSARKADNVWRSVFHPGSNSATKTIGAQMFDKPLPNTPTVYDWLYSGETRSRHR*