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Report for Sequence Feature Glyma.13g220400

Feature Type:gene_model
Chromosome:Gm13
Start:32778293
stop:32783534
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g220400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G21070.1AT ATBRCA1,BRCA1 JGI N/AIEA
6.3.2.19EC JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
K10683KEGG DNA repair and recombination proteins JGI N/AIEA
PTHR13763PantherFam BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 JGI N/AIEA
PF00097Pfam Zinc finger, C3HC4 type (RING finger) JGI N/AIEA
PF00533Pfam BRCA1 C Terminus (BRCT) domain JGI N/AIEA
PF13771Pfam PHD-like zinc-binding domain JGI N/AIEA

Proteins Associated with Glyma.13g220400
LocusGene SymbolProtein Name
PPR128 Psudo-Response Regulator gene 128

Gene model name correspondences to Glyma.13g220400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g29225 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g220400
>Glyma.13g220400.2 sequence-type=CDS polypeptide=Glyma.13g220400.2.p locus=Glyma.13g220400 id=Glyma.13g220400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGATCTAGAGAGAATGGCCATAGAACTCAAATGCCCTATCTGTTGGAGTTTGCTCGATTCTGCTGTGTCGCTTACCTGCAATCATCTTTTCTGCAACTCGTGCATTTTCAAGTCCATGAAATCAGCCTCTGCTTGTCCTGTCTGTAAAATTCCTTTCACTCGTCGAGAGGTTCGCCCTGCTCCTCACATGGACAACTTGGTCAGCATATATATAAACATGGAAGCTTCTTCAGGAGTTAATACATTTGTAACCCAGAATGCCCCTGTTACTAACTTATCAGATGGAGAAAAGGAATGTGAAGGTGATGCTGACTCTGGCAAGATGAAAGCTGGTGGAACTCATGAAGGTCGTCCGCAGGAGAAGAAAACCCGGAAGAAAAAGAAGTCTAAGAAGACGGTTCAGGCCAGCATGGAAAGTTCAGGTTCTGAGTTTGCAAAGCCTTCTTTTCCAGCAAAGAAAAGGGTACATGTGCCGCAAAATCTTCTTTCAGAAACTCCAATGAAGAATTTGAAAATTGGAGACTCTCTCAGTGAAATTAACAAAGAGAAAGAGGGAACGGAAAAGGTCCCAGTCAAGGAAAGTGAAAGGCCCCTCCAAAGTGAAAAAGATAATCCTGTTCTTTCGCCTTTCTTTTGGTTGAGAGAGGAAAAAGATGGTGAAATGTTAAGTCAACAAACTGATGAGGATCAAATTATTGATGGCTCAACACCAAATCCTCCTTCATTCAGTGATCTCAAGGACTCTGATGATGAAGTCCATTCTAATGTTGATCTAATGGATGAGGTGCAAAATAAAAGCTCTGTTAATTTATTTGACAGTGAAATGTTTGAATGGACACAAAGGCCTTGCTCTCCTGAATTGTTTTCAAGTCCCTCTAAAATGCAGGTCATGGATACTTATGAGGATGATGAAAATCAAGAGGAATTGGTGGCTTCCTCACTAGAGCTGGAGGCAAATCTGCCAAGAGTTGATGCTGACAACATGGAATTTGAGAATCCCAAAGAAGGAAATAGAATGGCTGATGAAGTACCTCCGAGTGTATGTTTTCCTCAAATCAGAAGTTCTGATGATCTAAATGGAATAAAGAAGTCTACAAAAAGAAGGAAGGCTAGAGATAAAAATAAACAAGAGCAGATTGGAGAACCAAAAAATTCATTTGATGAAATGTATGTTGAGGTTACTCAGGAACAAGCATTGGACAATTCTTCTAATCTGGGGAAGGGTAGTAGAAGAGGCAAGAGGGTTTGTTTCAATACCAGTCCAATTCCAACGCCTATAACTGCTTGTACAGTCCCCAATACATTAGGAGTTCAAAGCATTGGTGAAATGAAGAAGGCTAAGAATATAGATATTTTGCCATGTAAACAAGAAAATGAGAAGCATTATGCTCAGGAAATTTCTGGAAAAAGCCAGATGAAAATATCTGGAAAACAAAATATCAATCAAATGAATGAGTTTGCTGGTTCTGATTCATCCATTTTCAGTCTGCGAACAGATAATAACGGGAAGGACTCTAATAGGAGGCAATGCAAAAGCAAGTATTCCAGAAAAACTATATATTGCAGTAAAGAATTGGAAACTACTAAAAGGCAAAAACTTTCCTCGGCTTGTATCTCTAAGACTAAAAACAATGAAGAAATTCTACCTATTGAAAGTATTCATCAAGGTCCTGATGTCAGGGATTTGAATGATACATCAAAAGAGAAACATTGTCCCTTGATGGATCAAACAGTGTTAAGGAAATGTGAGAATCTTGTAAAAAATTATCAATGTGTTTTCTGTCTCTCATCAGAAGAATCAGAGGCTTCTGGCCCTATGGTGCATTACCTTGATGGCAGGCCTGTAACATCAGATTATGAAGGGGGATCTAAAGTCACGCATTGTCACAGGAACTGCACAGAGTGGGCCCCCAATGTATATTTTGATGGTGATTATTCAATAAATCTTGATGCGGAAATAAGTAGAAGTCGAAGAATTAAATGTAGTTTTTGTGGACTAAAAGGCGCCGCACTTGGTTGTTATGAGAAAAGCTGTCGCAGGAGCTTTCATGTTCCTTGTGCCAAGTGGACTTCTCAATGTCGATGGGATACGCAAAACTTTGTCATGTTATGCCCTCTGCATGCTTCCTCCATGTTGCCCTGTGAAGGTTCAGGATCCCAAAAAAGGAGCAAGAAATGCACAGCTAGTGAGGGAAAAGCCCATGGTCCTAAACATGACACAACAAGCCAAAGTCGGGCTGCTTATTTATCATACAAAAAAATTGTACTATGTTGTTCTGCTCTATCCGTGCAGGAGAGGGAAGTTGTTTCCGAATTTGAAAGAGTATCGAAAGCTACAGTTTTGAAAAATTGGGACTCGAGTGTCACCCATGTTATAGCATCAACGGATGAAAATGGGGCATGCAGAAGGACCCTCAAAGTATTGTTGGGTATACTGGAGGGAAAGTGGATTCTCAATATTGAGTGGATCAAAGCTTGCATGAAGGAAATGGGTCCTATTGATGAGGAGTGTTATGAAATTAATGTTGACATCCATGGAATTCGAGATGGTCCTCGTCTTGGACGACTAAGAGTATTGAACAAGCAACCAAAGCTTTTTTATGGCTACAAGTTTTATTTTATGGGAGATTTTATACCTTCATACAAGGGGTATCTGCAAAACCTTGTGGTTGCTGCTGGAGGGATAATTCTGCACAGAAAACCAGTGTCTGGTGACCAAGAATCAACTTCACCAGATATGCATACATACCAAACCCTTATAATTTACAGCCTCGAGCTTCCTGATAAATGTAAGCCTTCGAAAAAGGATACAATTTGCAGCCAAAGGCGTCATGATGCAGAGGTTCTGGCAAGTTCTACAGGTTCAAATGTAGCAAGTAATACATGGGTTCTGAATTCAATTGCAGCCTGCAAACTGCAATACCTTGCTCAATGA

>Glyma.13g220400.3 sequence-type=CDS polypeptide=Glyma.13g220400.3.p locus=Glyma.13g220400 id=Glyma.13g220400.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGGATCTAGAGAGAATGGCCATAGAACTCAAATGCCCTATCTGTTGGAGTTTGCTCGATTCTGCTGTGTCGCTTACCTGCAATCATCTTTTCTGCAACTCGTGCATTTTCAAGTCCATGAAATCAGCCTCTGCTTGTCCTGTCTGTAAAATTCCTTTCACTCGTCGAGAGGTTCGCCCTGCTCCTCACATGGACAACTTGGTCAGCATATATATAAACATGGAAGCTTCTTCAGGAGTTAATACATTTGTAACCCAGAATGCCCCTGTTACTAACTTATCAGATGGAGAAAAGGAATGTGAAGGTGATGCTGACTCTGGCAAGATGAAAGCTGGTGGAACTCATGAAGGTCGTCCGCAGGAGAAGAAAACCCGGAAGAAAAAGAAGTCTAAGAAGACGGTTCAGGCCAGCATGGAAAGTTCAGGTTCTGAGTTTGCAAAGCCTTCTTTTCCAGCAAAGAAAAGGGTACATGTGCCGCAAAATCTTCTTTCAGAAACTCCAATGAAGAATTTGAAAATTGGAGACTCTCTCAGTGAAATTAACAAAGAGAAAGAGGGAACGGAAAAGGTCCCAGTCAAGGAAAGTGAAAGGCCCCTCCAAAGTGAAAAAGATAATCCTGTTCTTTCGCCTTTCTTTTGGTTGAGAGAGGAAAAAGATGGTGAAATGTTAAGTCAACAAACTGATGAGGATCAAATTATTGATGGCTCAACACCAAATCCTCCTTCATTCAGTGATCTCAAGGACTCTGATGATGAAGTCCATTCTAATGTTGATCTAATGGATGAGGTGCAAAATAAAAGCTCTGTTAATTTATTTGACAGTGAAATGTTTGAATGGACACAAAGGCCTTGCTCTCCTGAATTGTTTTCAAGTCCCTCTAAAATGCAGCTGCAGGTCATGGATACTTATGAGGATGATGAAAATCAAGAGGAATTGGTGGCTTCCTCACTAGAGCTGGAGGCAAATCTGCCAAGAGTTGATGCTGACAACATGGAATTTGAGAATCCCAAAGAAGGAAATAGAATGGCTGATGAAGTACCTCCGAGTGTATGTTTTCCTCAAATCAGAAGTTCTGATGATCTAAATGGAATAAAGAAGTCTACAAAAAGAAGGAAGGCTAGAGATAAAAATAAACAAGAGCAGATTGGAGAACCAAAAAATTCATTTGATGAAATGTATGTTGAGGTTACTCAGGAACAAGCATTGGACAATTCTTCTAATCTGGGGAAGGGTAGTAGAAGAGGCAAGAGGGTTTGTTTCAATACCAGTCCAATTCCAACGCCTATAACTGCTTGTACAGTCCCCAATACATTAGGAGTTCAAAGCATTGGTGAAATGAAGAAGGCTAAGAATATAGATATTTTGCCATGTAAACAAGAAAATGAGAAGCATTATGCTCAGGAAATTTCTGGAAAAAGCCAGATGAAAATATCTGGAAAACAAAATATCAATCAAATGAATGAGTTTGCTGGTTCTGATTCATCCATTTTCAGTCTGCGAACAGATAATAACGGGAAGGACTCTAATAGGAGGCAATGCAAAAGCAAGTATTCCAGAAAAACTATATATTGCAGTAAAGAATTGGAAACTACTAAAAGGCAAAAACTTTCCTCGGCTTGTATCTCTAAGACTAAAAACAATGAAGAAATTCTACCTATTGAAAGTATTCATCAAGGTCCTGATGTCAGGGATTTGAATGATACATCAAAAGAGAAACATTGTCCCTTGATGGATCAAACAGTGTTAAGGAAATGTGAGAATCTTGTAAAAAATTATCAATGTGTTTTCTGTCTCTCATCAGAAGAATCAGAGGCTTCTGGCCCTATGGTGCATTACCTTGATGGCAGGCCTGTAACATCAGATTATGAAGGGGGATCTAAAGTCACGCATTGTCACAGGAACTGCACAGAGTGGGCCCCCAATGTATATTTTGATGGTGATTATTCAATAAATCTTGATGCGGAAATAAGTAGAAGTCGAAGAATTAAATGTAGTTTTTGTGGACTAAAAGGCGCCGCACTTGGTTGTTATGAGAAAAGCTGTCGCAGGAGCTTTCATGTTCCTTGTGCCAAGTGGACTTCTCAATGTCGATGGGATACGCAAAACTTTGTCATGTTATGCCCTCTGCATGCTTCCTCCATGTTGCCCTGTGAAGGTTCAGGATCCCAAAAAAGGAGCAAGAAATGCACAGCTAGTGAGGGAAAAGCCCATGGTCCTAAACATGACACAACAAGCCAAAGTCGGGCTGCTTATTTATCATACAAAAAAATTGTACTATGTTGTTCTGCTCTATCCGTGCAGGAGAGGGAAGTTGTTTCCGAATTTGAAAGAGTATCGAAAGCTACAGTTTTGAAAAATTGGGACTCGAGTGTCACCCATGTTATAGCATCAACGGATGAAAATGGGGCATGCAGAAGGACCCTCAAAGTATTGTTGGGTATACTGGAGGGAAAGTGGATTCTCAATATTGAGTGGATCAAAGCTTGCATGAAGGAAATGGGTCCTATTGATGAGGAGTGTTATGAAATTAATGTTGACATCCATGGAATTCGAGATGGTCCTCGTCTTGGACGACTAAGAGTATTGAACAAGCAACCAAAGCTTTTTTATGGCTACAAGTTTTATTTTATGGGAGATTTTATACCTTCATACAAGGGGTATCTGCAAAACCTTGTGGTTGCTGCTGGAGGGATAATTCTGCACAGAAAACCAGTGTCTGGTGACCAAGAATCAACTTCACCAGATATGCATACATACCAAACCCTTATAATTTACAGCCTCGAGCTTCCTGATAAATGTAAGCCTTCGAAAAAGGATACAATTTGCAGCCAAAGGCGTCATGATGCAGAGGTTCTGGCAAGTTCTACAGGTTCAAATGTAGCAAGTAATACATGGGTTCTGAATTCAATTGCAGCCTGCAAACTGCAATACCTTGCTCAATGA
Predicted protein sequences of Glyma.13g220400
>Glyma.13g220400.2.p sequence-type=predicted peptide transcript=Glyma.13g220400.2 locus=Glyma.13g220400 id=Glyma.13g220400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGDLERMAIELKCPICWSLLDSAVSLTCNHLFCNSCIFKSMKSASACPVCKIPFTRREVRPAPHMDNLVSIYINMEASSGVNTFVTQNAPVTNLSDGEKECEGDADSGKMKAGGTHEGRPQEKKTRKKKKSKKTVQASMESSGSEFAKPSFPAKKRVHVPQNLLSETPMKNLKIGDSLSEINKEKEGTEKVPVKESERPLQSEKDNPVLSPFFWLREEKDGEMLSQQTDEDQIIDGSTPNPPSFSDLKDSDDEVHSNVDLMDEVQNKSSVNLFDSEMFEWTQRPCSPELFSSPSKMQVMDTYEDDENQEELVASSLELEANLPRVDADNMEFENPKEGNRMADEVPPSVCFPQIRSSDDLNGIKKSTKRRKARDKNKQEQIGEPKNSFDEMYVEVTQEQALDNSSNLGKGSRRGKRVCFNTSPIPTPITACTVPNTLGVQSIGEMKKAKNIDILPCKQENEKHYAQEISGKSQMKISGKQNINQMNEFAGSDSSIFSLRTDNNGKDSNRRQCKSKYSRKTIYCSKELETTKRQKLSSACISKTKNNEEILPIESIHQGPDVRDLNDTSKEKHCPLMDQTVLRKCENLVKNYQCVFCLSSEESEASGPMVHYLDGRPVTSDYEGGSKVTHCHRNCTEWAPNVYFDGDYSINLDAEISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCAKWTSQCRWDTQNFVMLCPLHASSMLPCEGSGSQKRSKKCTASEGKAHGPKHDTTSQSRAAYLSYKKIVLCCSALSVQEREVVSEFERVSKATVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGPIDEECYEINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYFMGDFIPSYKGYLQNLVVAAGGIILHRKPVSGDQESTSPDMHTYQTLIIYSLELPDKCKPSKKDTICSQRRHDAEVLASSTGSNVASNTWVLNSIAACKLQYLAQ*

>Glyma.13g220400.3.p sequence-type=predicted peptide transcript=Glyma.13g220400.3 locus=Glyma.13g220400 id=Glyma.13g220400.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGDLERMAIELKCPICWSLLDSAVSLTCNHLFCNSCIFKSMKSASACPVCKIPFTRREVRPAPHMDNLVSIYINMEASSGVNTFVTQNAPVTNLSDGEKECEGDADSGKMKAGGTHEGRPQEKKTRKKKKSKKTVQASMESSGSEFAKPSFPAKKRVHVPQNLLSETPMKNLKIGDSLSEINKEKEGTEKVPVKESERPLQSEKDNPVLSPFFWLREEKDGEMLSQQTDEDQIIDGSTPNPPSFSDLKDSDDEVHSNVDLMDEVQNKSSVNLFDSEMFEWTQRPCSPELFSSPSKMQLQVMDTYEDDENQEELVASSLELEANLPRVDADNMEFENPKEGNRMADEVPPSVCFPQIRSSDDLNGIKKSTKRRKARDKNKQEQIGEPKNSFDEMYVEVTQEQALDNSSNLGKGSRRGKRVCFNTSPIPTPITACTVPNTLGVQSIGEMKKAKNIDILPCKQENEKHYAQEISGKSQMKISGKQNINQMNEFAGSDSSIFSLRTDNNGKDSNRRQCKSKYSRKTIYCSKELETTKRQKLSSACISKTKNNEEILPIESIHQGPDVRDLNDTSKEKHCPLMDQTVLRKCENLVKNYQCVFCLSSEESEASGPMVHYLDGRPVTSDYEGGSKVTHCHRNCTEWAPNVYFDGDYSINLDAEISRSRRIKCSFCGLKGAALGCYEKSCRRSFHVPCAKWTSQCRWDTQNFVMLCPLHASSMLPCEGSGSQKRSKKCTASEGKAHGPKHDTTSQSRAAYLSYKKIVLCCSALSVQEREVVSEFERVSKATVLKNWDSSVTHVIASTDENGACRRTLKVLLGILEGKWILNIEWIKACMKEMGPIDEECYEINVDIHGIRDGPRLGRLRVLNKQPKLFYGYKFYFMGDFIPSYKGYLQNLVVAAGGIILHRKPVSGDQESTSPDMHTYQTLIIYSLELPDKCKPSKKDTICSQRRHDAEVLASSTGSNVASNTWVLNSIAACKLQYLAQ*






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