SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g219900

Feature Type:gene_model
Chromosome:Gm13
Start:32696973
stop:32705728
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g219900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G18390.2AT TCP2 JGI N/AIEA
PTHR31072PantherFam TRANSCRIPTION FACTOR TCP4-RELATED JGI N/AIEA
PF03634Pfam TCP family transcription factor JGI N/AIEA

Proteins Associated with Glyma.13g219900
LocusGene SymbolProtein Name
TCP39 Teosinte branched1 and cycloidea and proliferating cell factor family protein gene 39

Gene model name correspondences to Glyma.13g219900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g29160 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g219900
>Glyma.13g219900.4 sequence-type=CDS polypeptide=Glyma.13g219900.4.p locus=Glyma.13g219900 id=Glyma.13g219900.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGGAGGATGAGATTCAAGCATGTAAGTTCCCAAGAGTTGGAAATGGTAGGAGTAGTGACCAATACCAAGAGGAGGAAGAAGAGGGTGGTGACCTAAGACTTAGAAAAGGTGTTGGTGTTGGTGGTGGTGGTGGAGGTGGAGGAAGTGATGCTAGCACAAACCACTTCCACCAAAGTAGTTGGCACCATTCTTCTAGAATCATAAGGGTGTCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAAGTGATGACCTCAAAAGGGTTAAGAGACAGAAGGGTTAGGCTCTCTGTGACCACAGCTATTCAGTTCTATGACCTTCAAGATCGCTTGGGTTACGACCAACCTAGCAAAGCTGTTGAGTGGTTAATCAAAGCTGCTTCAGAAGCTATCTCTGAGCTTCCTTCTCTCAACAACCCTTTCCCTGATACCCCTAAGCAACTAAGTGATAAGAAAAGGCCTACTAGTGGTGGTGGTCAACAACAACAACAAATACAACAAGGCCACTTTGATGATGCTGATGGAGACACAAGTTACCCCCAAAACCAAAGCCAGAACCTTTCTCTCTCCAAGTCTGCTTGCAGCAGCACTTCCGAGACAAGCAAGGGCTCAGGCTTGTCCCTCTCAAGGTCTGAGATTCGTGTGAACCGTGTTAAGGCAAGGGAGAGGGCTAGGGAGAGAGCTGCTAAAGAAAAAGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGAGTGAATCTAGCATTGCACATCACCACCATCATCACCATGTGAACAACAACAACCACATGTCTCACACAGCTTCCTTCACTGAGCTTCTCACTGGTGGGATTGGGAGCACTGTAACAGTTAACCCCAACACCACCACCACCACCACCACAACAACAACAAGTCCTAATGGGTCATCAGTTCATCAGATCCATGATGGTCATGATCATGAGACTAATCTATTCAACAAGGGAAGGCAACAACAACAACAGCATCATTGGTCTCAAACAGTGACACCTATGGACTACTTCAGCACAGGCCTCTTGGTAGGACCTTCTTCATCATCTGCAAGAACTCAACAACACCAACACCAATCTTCTTCAGCACATTTCCAACTGGGACATGCACATGCCCTTCCAATCTCTCCATTCAGTGGAGAAAACCACTCAGAGCAGCTGCAGCATTTTTCCTTCATGCCAGACCACCTCAACAACATACCAGCTCATCATGTGGTTACATCTTCTTCTGCTTCTCATCAACCCAACGGGGGTGACAACAACTACAACCTCAACTTCAGTATCTCTACATCGACGGGCCTTGCTGGTTACAACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTTCCTCGTTTTTGCCTCATCACCTCCAGAGGTTTCAACCTTTAGACGGATCGTCCAACCTACCTTTCTTTATAGGAGCTGCTGCTCCTTCTTCTGCTCCTCCAACCATGGACAACAACAACAATAATAACAGCAACAACCATCACCACCTTCAGTTCTCACCTGTCTTTGATGGCCGCTTGCAACTCTGCTATGGCGATGGAACAAGGCATTCTGACCACAAGGGGAAGGGAAAGAACTAA
Predicted protein sequences of Glyma.13g219900
>Glyma.13g219900.4.p sequence-type=predicted peptide transcript=Glyma.13g219900.4 locus=Glyma.13g219900 id=Glyma.13g219900.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEEDEIQACKFPRVGNGRSSDQYQEEEEEGGDLRLRKGVGVGGGGGGGGSDASTNHFHQSSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASEAISELPSLNNPFPDTPKQLSDKKRPTSGGGQQQQQIQQGHFDDADGDTSYPQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKEKEKEKEKEKEKESESSIAHHHHHHHVNNNNHMSHTASFTELLTGGIGSTVTVNPNTTTTTTTTTTSPNGSSVHQIHDGHDHETNLFNKGRQQQQQHHWSQTVTPMDYFSTGLLVGPSSSSARTQQHQHQSSSAHFQLGHAHALPISPFSGENHSEQLQHFSFMPDHLNNIPAHHVVTSSSASHQPNGGDNNYNLNFSISTSTGLAGYNNRGTLQSNSPSSSFLPHHLQRFQPLDGSSNLPFFIGAAAPSSAPPTMDNNNNNNSNNHHHLQFSPVFDGRLQLCYGDGTRHSDHKGKGKN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo