Glyma.13g207600

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Report for Sequence Feature Glyma.13g207600

Feature Type:	gene_model
Chromosome:	Gm13
Start:	32108641
stop:	32110199
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.13g207600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G08970.1	AT	nuclear factor Y, subunit C9	JGI	N/A	IEA
GO:0006351	GO-bp	transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006355	GO-bp	regulation of transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0005622	GO-cc	intracellular	JGI	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0016602	GO-cc	CCAAT-binding factor complex	EnsemblGenomes	N/A	IEA
GO:0003677	GO-mf	DNA binding	EnsemblGenomes	N/A	IEA
GO:0003677	GO-mf	DNA binding	JGI	N/A	IEA
GO:0043565	GO-mf	sequence-specific DNA binding	JGI	N/A	IEA
GO:0046982	GO-mf	protein heterodimerization activity	EnsemblGenomes	N/A	IEA
KOG1659	KOG	Class 2 transcription repressor NC2, alpha subunit (DRAP1)	JGI	N/A	IEA
PTHR10252	Panther	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	JGI	N/A	IEA
PTHR10252:SF6	Panther	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED	JGI	N/A	IEA
PF00808	PFAM	Histone-like transcription factor (CBF/NF-Y) and archaeal histone	JGI	N/A	IEA

Proteins Associated with Glyma.13g207600

Locus	Gene Symbol	Protein Name
	NF-YC10	nuclear factor Y transcription factor family protein

Expression Patterns of Glyma.13g207600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.13g207600 not represented in the dataset	Glyma.13g207600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.13g207600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma13g27780	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.13g207600

Limit To All Plant Sequences

>Glyma.13g207600.2 sequence-type=transcript locus=Glyma.13g207600 ID=Glyma.13g207600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTTCTTCACCTCAATTTTCCCCTCTTTGGTTCAGAACTGAAATCTCAATCTGTTCAAAACAAATTAAACTTTAGTCTATAACAACAACGCTAAAATGGATCAAAACCAGCATGTTCAACCAGCACAAGAAGCATATGGCGAAAACCAATATCAATCTAACCCCGTGACGACACCTACCGTTCTTCCAACTCAGACATCTGATTCTTCTCTTTCATCATCCTACCCAAGACAGCACCCAAATGATCCCCAATTGGAAGCCATGTACGAGCTACGACAAGAACGCTTGCAACAACAACTCAACAACTTCTGGGCAAAACAGTGCCAGGAAATCCAGGAGGCCACTGATTTAAGGACTCACAGCTTGCCTTTGGCTAGGATTAAGAAGATTATGAAGTCTGATGAGGATGTAAAGCTGGTATCAGCTGAGGCTCCGGTGGTGTTTGCCAAGGCTTGTGAAATGTTCATTATGGAGCTCACTTTGAGGGCTTGGGCTAATGTTGAGGAGGACCAAAGGAAGATAATTAAGAAGCATGACATTGCATCTTCAATCTCAAGGGCAGATGTGTTTGATTTTCTTATTGATACTGTCCCCAGGCCGCTTGAAAATATATTGGATCAACAAGGGTTTGTAGGCCTACCAACAAGCACTGTTCCAACTCCATTGAATGATGCTTGCTATCATAATCCCCCTCCTCAGGCGCTTGTTCCGGGCAATCCATATGGTTCTCCAAGAATAGCTGTGGGAATGCCTATTCTTGATCAAAATCATCCTGGGCTGCAAATCCATCATTTTCTAACTCCAATGGAGCCCACCCCCACCCCCACCCCCAATCCCCAAAACCCTTCTCCTAGTTCGGATTGTTGA

>Glyma.13g207600.3 sequence-type=transcript locus=Glyma.13g207600 ID=Glyma.13g207600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTTCTTCACCTCAATTTTCCCCTCTTTGGTTCAGAACTGAAATCTCAATCTGTTCAAAACAAATTAAACTTTAGGTGTTGTGAGTGTTGCATGCAAGTCCACGTCTATAACAACAACGCTAAAATGGATCAAAACCAGCATGTTCAACCAGCACAAGAAGCATATGGCGAAAACCAATATCAATCTAACCCCGTGACGACACCTACCGTTCTTCCAACTCAGACATCTGATTCTTCTCTTTCATCATCCTACCCAAGACAGCACCCAAATGATCCCCAATTGGAAGCCATGTACGAGCTACGACAAGAACGCTTGCAACAACAACTCAACAACTTCTGGGCAAAACAGTGCCAGGAAATCCAGGAGGCCACTGATTTAAGGACTCACAGCTTGCCTTTGGCTAGGATTAAGAAGATTATGAAGTCTGATGAGGATGTAAAGCTGGTATCAGCTGAGGCTCCGGTGGTGTTTGCCAAGGCTTGTGAAATGTTCATTATGGAGCTCACTTTGAGGGCTTGGGCTAATGTTGAGGAGGACCAAAGGAAGATAATTAAGAAGCATGACATTGCATCTTCAATCTCAAGGGCAGATGTGTTTGATTTTCTTATTGATACTGTCCCCAGGCCGCTTGAAAATATATTGGATCAACAAGGGTTTGTAGGCCTACCAACAAGCACTGTTCCAACTCCATTGAATGATGCTTGCTATCATAATCCCCCTCCTCAGGCGCTTGTTCCGGGCAATCCATATGGTTCTCCAAGAATAGCTGTGGGAATGCCTATTCTTGATCAAAATCATCCTGGGCTGCAAATCCATCATTTTCTAACTCCAATGGAGCCCACCCCCACCCCCACCCCCAATCCCCAAAACCCTTCTCCTAGTTCGGATTGTTGA

Coding sequences of Glyma.13g207600

Limit To All Plant Sequences

>Glyma.13g207600.1 sequence-type=CDS polypeptide=Glyma.13g207600.1.p locus=Glyma.13g207600 ID=Glyma.13g207600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAAGTCCACGTCTATAACAACAACGCTAAAATGGATCAAAACCAGCATGTTCAACCAGCACAAGAAGCATATGGCGAAAACCAATATCAATCTAACCCCGTGACGACACCTACCGTTCTTCCAACTCAGACATCTGATTCTTCTCTTTCATCATCCTACCCAAGACAGCACCCAAATGATCCCCAATTGGAAGCCATGTACGAGCTACGACAAGAACGCTTGCAACAACAACTCAACAACTTCTGGGCAAAACAGTGCCAGGAAATCCAGGAGGCCACTGATTTAAGGACTCACAGCTTGCCTTTGGCTAGGATTAAGAAGATTATGAAGTCTGATGAGGATGTAAAGCTGGTATCAGCTGAGGCTCCGGTGGTGTTTGCCAAGGCTTGTGAAATGTTCATTATGGAGCTCACTTTGAGGGCTTGGGCTAATGTTGAGGAGGACCAAAGGAAGATAATTAAGAAGCATGACATTGCATCTTCAATCTCAAGGGCAGATGTGTTTGATTTTCTTATTGATACTGTCCCCAGGCCGCTTGAAAATATATTGGATCAACAAGGGTTTGTAGGCCTACCAACAAGCACTGTTCCAACTCCATTGAATGATGCTTGCTATCATAATCCCCCTCCTCAGGCGCTTGTTCCGGGCAATCCATATGGTTCTCCAAGAATAGCTGTGGGAATGCCTATTCTTGATCAAAATCATCCTGGGCTGCAAATCCATCATTTTCTAACTCCAATGGAGCCCACCCCCACCCCCACCCCCAATCCCCAAAACCCTTCTCCTAGTTCGGATTGTTGA

>Glyma.13g207600.2 sequence-type=CDS polypeptide=Glyma.13g207600.2.p locus=Glyma.13g207600 ID=Glyma.13g207600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATCAAAACCAGCATGTTCAACCAGCACAAGAAGCATATGGCGAAAACCAATATCAATCTAACCCCGTGACGACACCTACCGTTCTTCCAACTCAGACATCTGATTCTTCTCTTTCATCATCCTACCCAAGACAGCACCCAAATGATCCCCAATTGGAAGCCATGTACGAGCTACGACAAGAACGCTTGCAACAACAACTCAACAACTTCTGGGCAAAACAGTGCCAGGAAATCCAGGAGGCCACTGATTTAAGGACTCACAGCTTGCCTTTGGCTAGGATTAAGAAGATTATGAAGTCTGATGAGGATGTAAAGCTGGTATCAGCTGAGGCTCCGGTGGTGTTTGCCAAGGCTTGTGAAATGTTCATTATGGAGCTCACTTTGAGGGCTTGGGCTAATGTTGAGGAGGACCAAAGGAAGATAATTAAGAAGCATGACATTGCATCTTCAATCTCAAGGGCAGATGTGTTTGATTTTCTTATTGATACTGTCCCCAGGCCGCTTGAAAATATATTGGATCAACAAGGGTTTGTAGGCCTACCAACAAGCACTGTTCCAACTCCATTGAATGATGCTTGCTATCATAATCCCCCTCCTCAGGCGCTTGTTCCGGGCAATCCATATGGTTCTCCAAGAATAGCTGTGGGAATGCCTATTCTTGATCAAAATCATCCTGGGCTGCAAATCCATCATTTTCTAACTCCAATGGAGCCCACCCCCACCCCCACCCCCAATCCCCAAAACCCTTCTCCTAGTTCGGATTGTTGA

>Glyma.13g207600.3 sequence-type=CDS polypeptide=Glyma.13g207600.3.p locus=Glyma.13g207600 ID=Glyma.13g207600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAAGTCCACGTCTATAACAACAACGCTAAAATGGATCAAAACCAGCATGTTCAACCAGCACAAGAAGCATATGGCGAAAACCAATATCAATCTAACCCCGTGACGACACCTACCGTTCTTCCAACTCAGACATCTGATTCTTCTCTTTCATCATCCTACCCAAGACAGCACCCAAATGATCCCCAATTGGAAGCCATGTACGAGCTACGACAAGAACGCTTGCAACAACAACTCAACAACTTCTGGGCAAAACAGTGCCAGGAAATCCAGGAGGCCACTGATTTAAGGACTCACAGCTTGCCTTTGGCTAGGATTAAGAAGATTATGAAGTCTGATGAGGATGTAAAGCTGGTATCAGCTGAGGCTCCGGTGGTGTTTGCCAAGGCTTGTGAAATGTTCATTATGGAGCTCACTTTGAGGGCTTGGGCTAATGTTGAGGAGGACCAAAGGAAGATAATTAAGAAGCATGACATTGCATCTTCAATCTCAAGGGCAGATGTGTTTGATTTTCTTATTGATACTGTCCCCAGGCCGCTTGAAAATATATTGGATCAACAAGGGTTTGTAGGCCTACCAACAAGCACTGTTCCAACTCCATTGAATGATGCTTGCTATCATAATCCCCCTCCTCAGGCGCTTGTTCCGGGCAATCCATATGGTTCTCCAAGAATAGCTGTGGGAATGCCTATTCTTGATCAAAATCATCCTGGGCTGCAAATCCATCATTTTCTAACTCCAATGGAGCCCACCCCCACCCCCACCCCCAATCCCCAAAACCCTTCTCCTAGTTCGGATTGTTGA

Predicted protein sequences of Glyma.13g207600

Limit To All Plant Sequences

>Glyma.13g207600.1.p sequence-type=predicted peptide transcript=Glyma.13g207600.1 locus=Glyma.13g207600 ID=Glyma.13g207600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQVHVYNNNAKMDQNQHVQPAQEAYGENQYQSNPVTTPTVLPTQTSDSSLSSSYPRQHPNDPQLEAMYELRQERLQQQLNNFWAKQCQEIQEATDLRTHSLPLARIKKIMKSDEDVKLVSAEAPVVFAKACEMFIMELTLRAWANVEEDQRKIIKKHDIASSISRADVFDFLIDTVPRPLENILDQQGFVGLPTSTVPTPLNDACYHNPPPQALVPGNPYGSPRIAVGMPILDQNHPGLQIHHFLTPMEPTPTPTPNPQNPSPSSDC*

>Glyma.13g207600.2.p sequence-type=predicted peptide transcript=Glyma.13g207600.2 locus=Glyma.13g207600 ID=Glyma.13g207600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDQNQHVQPAQEAYGENQYQSNPVTTPTVLPTQTSDSSLSSSYPRQHPNDPQLEAMYELRQERLQQQLNNFWAKQCQEIQEATDLRTHSLPLARIKKIMKSDEDVKLVSAEAPVVFAKACEMFIMELTLRAWANVEEDQRKIIKKHDIASSISRADVFDFLIDTVPRPLENILDQQGFVGLPTSTVPTPLNDACYHNPPPQALVPGNPYGSPRIAVGMPILDQNHPGLQIHHFLTPMEPTPTPTPNPQNPSPSSDC*

>Glyma.13g207600.3.p sequence-type=predicted peptide transcript=Glyma.13g207600.3 locus=Glyma.13g207600 ID=Glyma.13g207600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQVHVYNNNAKMDQNQHVQPAQEAYGENQYQSNPVTTPTVLPTQTSDSSLSSSYPRQHPNDPQLEAMYELRQERLQQQLNNFWAKQCQEIQEATDLRTHSLPLARIKKIMKSDEDVKLVSAEAPVVFAKACEMFIMELTLRAWANVEEDQRKIIKKHDIASSISRADVFDFLIDTVPRPLENILDQQGFVGLPTSTVPTPLNDACYHNPPPQALVPGNPYGSPRIAVGMPILDQNHPGLQIHHFLTPMEPTPTPTPNPQNPSPSSDC*

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