SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g206600

Feature Type:gene_model
Chromosome:Gm13
Start:31442456
stop:31446802
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g206600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G21770.1AT JGI N/AIEA
3.5.4.26EC diaminohydroxyphosphoribosylaminopyrimidine deaminase JGI N/AIEA
5.4.99.28EC tRNA pseudouridine32 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
KOG1919 KOG RNA pseudouridylate synthases JGI N/AIEA
PTHR11079PantherFam CYTOSINE DEAMINASE FAMILY MEMBER JGI N/AIEA
PF00849Pfam RNA pseudouridylate synthase JGI N/AIEA

Gene model name correspondences to Glyma.13g206600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g27660 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g206600
>Glyma.13g206600.1 sequence-type=CDS polypeptide=Glyma.13g206600.1.p locus=Glyma.13g206600 id=Glyma.13g206600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATTCGGTGGCGATGACGGTGGCGTCAATGTTGTTCGCCGGCGGCTGTCGTATCCTCGCCGTGCCTGCGGCGGCGCGCGCCATCCGCATCCCGCGAGCAGCTCTCAGCAGTCACCACAACAAGCACGCTCCGAGTTGGGGCTGTCGGAGTTCACACAACAGTAACACTGCACTCGCCGGTGAAGCCGAATTCTCAACAACCGACGCCGGAAACTTAACCGCTACCTCTTCTTCCGACAGTTTCCCGAAGTATGACCGGTTGCTTCCATGTCCATCGCACAAAAATCCACCGAGAATTGAACACTTAGTTATATCAGAAGGAGGACCTGTGTTAGAACTTATTTGCAAGGCCCTGGATCTTCCTCCTTTGTACGTTTCAGATTTGATTCAATTTGGAGCTGTATACTACGCTCTTGTTTGTCCGCAGCCTCCTCCGAATGCTACTGAAGAGCAAATTAGGGTATTCAAAGAAGTAACGGAACCTTCGGTGTTGCGCAAAAGAGCTTCCATCAAAGGCAAAACTGTGCGAGAGGCACAGAAAACTTTCCGTGTAACTCACGTGGATCAATTTGTTGAGCCAGGGACTTATTTGCGAGTACATGTGCACCCCAAACGCTTTCCTAGGAGCTATGAGATTGATTGGAGATCAAGGATCATAGCTGTGGCGGAGTCCTATGTAGTTTTGGATAAACCTGCTGGTACATCAGTAGGTGGCACTACTGACAACATTGAAGAAAGTTGTGCAACCTTTGCTACTCGTGCCTTGGGAATGACAACCCCTTTGATGACTACCCATCAAATTGATAATTGCACTGAAGGCTGTGTGGTATTGGCTAGGACTAAAGACTATTGCTCTATCTTTCATGGCAAAATCAGGGAGAAAAAGGTGAAGAAGCTCTATCTCGCTCTTGCAGCTTCTCCTTTGCCAACTGGAATCATTACCCACTATATGCGTCCTATCAACATGGCTCCTAGACTTATTTCTGAAGATTTTATCAAGGGATGGCATCTGTGTCAACTTGAGGTCCTGGAATGTAGAAAGATTCCCTGGCCAACTACTGCTATACAAGACAAGTATTGTGTTGAAGACTGTGGGTGGCCTTCTCAAGATTATGCATACGAGTGCAAAATCAACCTTCTTACTGGTAAAACACATCAGATTCGAGCTCAATTTGCTGCCTATAAGGCACCATTAATTGGTGATTCTATGTATATGCCAGCTGCAATTGCGGATGTGAGTAATCCTGGACTTAATCCATTTGGAAAATACAAGAAAGATTTCAGTAGTGAGAGTGAAAAAGAAACAGCTGTTGTAAATTGGATGGCACAACATGGAAAAGAGCCGAGTGTTGCAATTGGCCTTCAAGCATGTCAAATTTCATGGGATGATGATGAACACTTTTATGAAGCTGGTTTACCTTGGTGGAGGTGTTAA
Predicted protein sequences of Glyma.13g206600
>Glyma.13g206600.1.p sequence-type=predicted peptide transcript=Glyma.13g206600.1 locus=Glyma.13g206600 id=Glyma.13g206600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNSVAMTVASMLFAGGCRILAVPAAARAIRIPRAALSSHHNKHAPSWGCRSSHNSNTALAGEAEFSTTDAGNLTATSSSDSFPKYDRLLPCPSHKNPPRIEHLVISEGGPVLELICKALDLPPLYVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASPLPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWPSQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDFSSESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWRC*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo