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Report for Sequence Feature Glyma.13g192600

Feature Type:gene_model
Chromosome:Gm13
Start:30005759
stop:30032714
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g192600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G29940.1AT NRPA2 JGI N/AIEA
2.7.7.6EC DNA-directed RNA polymerase JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003899GO-mf DNA-directed 5'-3' RNA polymerase activity JGI N/AIEA
GO:0032549GO-mf ribonucleoside binding JGI N/AIEA
K03002KEGG Transcription machinery JGI N/AIEA
PTHR20856PantherFam DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 JGI N/AIEA
PTHR20856:SF5PantherFam DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA2 JGI N/AIEA
PF00562Pfam RNA polymerase Rpb2, domain 6 JGI N/AIEA
PF04560Pfam RNA polymerase Rpb2, domain 7 JGI N/AIEA
PF04561Pfam RNA polymerase Rpb2, domain 2 JGI N/AIEA
PF04563Pfam RNA polymerase beta subunit JGI N/AIEA
PF04565Pfam RNA polymerase Rpb2, domain 3 JGI N/AIEA
PF06883Pfam RNA polymerase I, Rpa2 specific domain JGI N/AIEA

Gene model name correspondences to Glyma.13g192600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g26190 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g192600
>Glyma.13g192600.1 sequence-type=CDS polypeptide=Glyma.13g192600.1.p locus=Glyma.13g192600 id=Glyma.13g192600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGGCTAAACCGGGTTCGGTTCCGGACTTCGAGGCGCTGCGGGAGCTCTTCAAGCATCACATAGAGTCCTTCGATTACATGGTCGATGCTGGATTAGATACCATGCTCGGACACATCAAACCCGTCGAAGTTTTCGATGATTTCACTTCCACAAAGCTTAGAATTTGGTTGGATAATCCAGTGCTGTATCCGCCGCAGAAGGAGCGGATTTCGAGGACAATGCGGGAGGCTTTACTTCCGTTTGAATGTAGACAGGCAAAGATTTCATATTCAGGGAAGATTACTATAGATGTTTGCTTTCAATATAATGATGGGCCTATTATCAGAGAAAATGTAAATTTTGGGCAGTTTCCCATAATGCTGCAGTCAAAGTTATGCAACTTGAGAGGTGCTGATCCCCAGAAACTTGTGTCCTACAAGGAAGAAGCATCGGAGATGGGTGGTTACTTCATCTTGAATGGCCTTGAGAGAGTTGTCCGACTGTTAATTTTGCCAAAACGGAATTATCCTATGAGTATGGTGCGGAATTCATTTAGTGACAGGCGTGAAGGATATACAGATAAAGCAGTTGTAATAAGGTGTGTAAGAGCTGATCAGTCCTCATTATCAGTAAGATTGTATTACCTTCGTAATGGGAGTGCAAGACTTGGTTTCTGGTTAAGAGGAAGGGAGTACTTGCTTCCTGTGGGCATTATTTTGAAGGCTCTCATTGACACAACTGACCGTGAAATTTATGTAAATTTGACAAGCTGCTATAATGAGAAGTATGAAAAGGGAAAGGGTGCTGTTGGGACCCAGCTTGTTGGTGAAAGGGCAAAAATAATCTTAGATGAACTTCGAGATTTGTCTCTTTTCACTCGTCTTCAATGTCTAGAATATATTGGAGAGCACTTCCAACCTGTTATGAATGAACTTAAGAATGACAGTTATCCTATTGTGGCTGATGCTGTTTTGAAGGACTGCATATTAGTTCATCTGGATAACAATTTTGACAAATTCAATCTTCTCATCTTCATGTTGCAGAAACTTTTCTCACTTATAGATCAGACATCGGTGCCGGACAACCCTGATTCCTTGCAAAATCATGAGGTTTTACTCCCTGGACACCTGATTACACTTTATCTCAAGGAAAAACTGGAAGATTGGCTGCAAAAGGGAAGAAGGCTTCTTCTGGATGAGATTGATAAAAAAAGCAAGAAATTTGATTTCAGTGACATTGTTCAAGTTAAGAAAGTCATGGATAAAAATTCACCAAAGCAAGTCAGTACAGCAGTTGAAAACATGTTGAAAACTGGAAGATTGGTTACACAAACGGGTCTAGATCTGCAGCAGAGGGCAGGTTATACAGTTCAGGCTGAAAGGCTAAATTTTTTACGTTTTCTATCACATTTCCGTGCTGTTCATCGAGGGGCCTCATTTGCTGGACTTCGTACCACAACTGTGCGGAAGCTGTTACCTGAATCTTGGGGTTTTCTCTGCCCTGTGCACACACCTGATGGAGAGCCCTGTGGATTGTTGAATCATATGACTTGCACTAGTAGGATAACGTCATTCTTTGATTCTCAAGGAAACATTAAAGATTATTTTAAAATAAAAATGTCCATCCTAAATGTTTTATTGGAGGTTGGGATGACACCATCATTGCCAAAGATATTTCTTCCTGGTCCACCTGAAGCTCTTACTGTTCTCTTAGATGGTTGTGTTGTTGGTTGTATAGCTTCCAGTGAAGTGGAGAAAGTTGTGGCTCACATACGAGAATTAAAAGTGTCATCTGTCGCAGTGATTCCTGATGATATGGAAGTAGGATATGTTCCTTTGAGCATGGGTGGTGCCTATCCTGGTCTCTACCTGTGCACATCCCCTTCTAGATTTGTTCGGCCAGTTAGAAATATATCAATTGCTTCCGATGGAAGTGAAAACATAGAACTCATTGGGCCATTTGAGCAGGTTTTTATGGAAATTAGATGTCCTGATGGTGGGGATGGTGGAAGAAAAAGTTCATTTCCTGCAACTCACGAAGAAATTCATCCAACAGTAATGCTTAGTGTAGTTGCTAATCTCACACCATGGTCAGATCATAATCAGAGTCCACGAAATATGTACCAGTGTCAGATGGCAAAGCAAACAATGGCATTTTCTTCACAAACTATTCAACATCGTGCAGACCAAAAGTTATATCATCTTCAGACTCCTCAGACTCCCATTGTACGCACAAGTACATATACTAAATACAACATTGATGAATTTCCAACAGGCACAAATGCTATAGTTGCAGTTCTGGCATATACGGGATATGATATGGAGGATGCTATGATTCTAAATAAGTCATCAGTGGAGCGTGGAATGTTTCATGGACAAATATATCAGACAGAAACTATTGACTTAACTGAACAAGGGGGAAGGTCAGACCGATCTTCAAGAATGTTCAGAAAAAGTAATATAGAGAAATCAGCTTGTCCGTCCATTGATTCAGATGGACTTCCACATGTTGGTCAGATGATACGGCCAGATGAACCCTATTGTAGCATTTATAATGAAGTAACAAGTTCCATACACACCTTAAAAAGAAAGGGTTCTGAAGCTGTTTATGTTGACTATGTTGCTGCTGATGTAAAAAACAAGAAGCACCTTCAGAAGGTTAACATACGTTTTCGACATCCCCGGAACCCTGTTATTGGTGATAAATTTAGCAGCAGACATGGGCAGAAAGGTGTTTGCTCTCAGCTGTGGCCAGATGTTGATATGCCATTTTCTGGAACTACTGGGATGCGCCCAGATCTCATTATCAATCCTCATGCATTTCCTTCCAGGATGACAATTGCTATGCTTTTGGAATCTGTTGCTGCTAAGGGAGGTAGCTTACGTGGAGAATTTGTAGATGCAACTCCATTTCGAAGTTCGGTTACGAAAGACAGTGGGGAGTCTGATTCAAAATCAGGTTCACTTGTCGATGATCTTGGCCTTCTGCTAAGAGAAAAGGGATTTAATTATCATGGTTTGGAGGTTCTATACAGTGGTGTTTATGGAACAGAACTAACATGTGAGATATTTATTGGACCTGTTTATTATCAGCGGCTGCGTCACATGGTTTCAGACAAATTTCAGGTTCGATCTACTGGCACAATTGACCAGGTCACCCGGCAGCCGATAAAAGGACGAAAGCGTGGTGGGGGAATTCGATTTGGAGAAATGGAACGCGACTCTCTGCTTGCACATGGAGCTGCATATCTTCTGCATGATAGGTTGCACACCTGTTCTGATTATCACATTGCCGATGTTTGTTCACTTTGTGGAAGCATGCTTGCAACAACATTCATCCAACCTCAAAAGCGGCCAGTTCGGGAGATTGGTGGGCTACCCCCTGGAAGAGCTCCGAAAAAGGTCACTTGTCATGCTTGCCAAACGAGTAAGGGCATGGAGACAGTCGCCATGCCCTATGTATTTAGATATTTGGCTGCTGAGTTAGCAGCAATGAATATAAAAATGACTCTTAAGCTCAGTGATGGAGCCGGAGTTGGAGCGTGA

>Glyma.13g192600.2 sequence-type=CDS polypeptide=Glyma.13g192600.2.p locus=Glyma.13g192600 id=Glyma.13g192600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGGCTAAACCGGGTTCGGTTCCGGACTTCGAGGCGCTGCGGGAGCTCTTCAAGCATCACATAGAGTCCTTCGATTACATGGTCGATGCTGGATTAGATACCATGCTCGGACACATCAAACCCGTCGAAGTTTTCGATGATTTCACTTCCACAAAGCTTAGAATTTGGTTGGATAATCCAGTGCTGTATCCGCCGCAGAAGGAGCGGATTTCGAGGACAATGCGGGAGGCTTTACTTCCGTTTGAATGTAGACAGGCAAAGATTTCATATTCAGGGAAGATTACTATAGATGTTTGCTTTCAATATAATGATGGGCCTATTATCAGAGAAAATGTAAATTTTGGGCAGTTTCCCATAATGCTGCAGTTATGTAGACTGTTTTATCTTTCACCTGGACTGATGCAGTCAAAGTTATGCAACTTGAGAGGTGCTGATCCCCAGAAACTTGTGTCCTACAAGGAAGAAGCATCGGAGATGGGTGGTTACTTCATCTTGAATGGCCTTGAGAGAGTTGTCCGACTGTTAATTTTGCCAAAACGGAATTATCCTATGAGTATGGTGCGGAATTCATTTAGTGACAGGCGTGAAGGATATACAGATAAAGCAGTTGTAATAAGGTGTGTAAGAGCTGATCAGTCCTCATTATCAGTAAGATTGTATTACCTTCGTAATGGGAGTGCAAGACTTGGTTTCTGGTTAAGAGGAAGGGAGTACTTGCTTCCTGTGGGCATTATTTTGAAGGCTCTCATTGACACAACTGACCGTGAAATTTATGTAAATTTGACAAGCTGCTATAATGAGAAGTATGAAAAGGGAAAGGGTGCTGTTGGGACCCAGCTTGTTGGTGAAAGGGCAAAAATAATCTTAGATGAACTTCGAGATTTGTCTCTTTTCACTCGTCTTCAATGTCTAGAATATATTGGAGAGCACTTCCAACCTGTTATGAATGAACTTAAGAATGACAGTTATCCTATTGTGGCTGATGCTGTTTTGAAGGACTGCATATTAGTTCATCTGGATAACAATTTTGACAAATTCAATCTTCTCATCTTCATGTTGCAGAAACTTTTCTCACTTATAGATCAGACATCGGTGCCGGACAACCCTGATTCCTTGCAAAATCATGAGGTTTTACTCCCTGGACACCTGATTACACTTTATCTCAAGGAAAAACTGGAAGATTGGCTGCAAAAGGGAAGAAGGCTTCTTCTGGATGAGATTGATAAAAAAAGCAAGAAATTTGATTTCAGTGACATTGTTCAAGTTAAGAAAGTCATGGATAAAAATTCACCAAAGCAAGTCAGTACAGCAGTTGAAAACATGTTGAAAACTGGAAGATTGGTTACACAAACGGGTCTAGATCTGCAGCAGAGGGCAGGTTATACAGTTCAGGCTGAAAGGCTAAATTTTTTACGTTTTCTATCACATTTCCGTGCTGTTCATCGAGGGGCCTCATTTGCTGGACTTCGTACCACAACTGTGCGGAAGCTGTTACCTGAATCTTGGGGTTTTCTCTGCCCTGTGCACACACCTGATGGAGAGCCCTGTGGATTGTTGAATCATATGACTTGCACTAGTAGGATAACGTCATTCTTTGATTCTCAAGGAAACATTAAAGATTATTTTAAAATAAAAATGTCCATCCTAAATGTTTTATTGGAGGTTGGGATGACACCATCATTGCCAAAGATATTTCTTCCTGGTCCACCTGAAGCTCTTACTGTTCTCTTAGATGGTTGTGTTGTTGGTTGTATAGCTTCCAGTGAAGTGGAGAAAGTTGTGGCTCACATACGAGAATTAAAAGTGTCATCTGTCGCAGTGATTCCTGATGATATGGAAGTAGGATATGTTCCTTTGAGCATGGGTGGTGCCTATCCTGGTCTCTACCTGTGCACATCCCCTTCTAGATTTGTTCGGCCAGTTAGAAATATATCAATTGCTTCCGATGGAAGTGAAAACATAGAACTCATTGGGCCATTTGAGCAGGTTTTTATGGAAATTAGATGTCCTGATGGTGGGGATGGTGGAAGAAAAAGTTCATTTCCTGCAACTCACGAAGAAATTCATCCAACAGTAATGCTTAGTGTAGTTGCTAATCTCACACCATGGTCAGATCATAATCAGAGTCCACGAAATATGTACCAGTGTCAGATGGCAAAGCAAACAATGGCATTTTCTTCACAAACTATTCAACATCGTGCAGACCAAAAGTTATATCATCTTCAGACTCCTCAGACTCCCATTGTACGCACAAGTACATATACTAAATACAACATTGATGAATTTCCAACAGGCACAAATGCTATAGTTGCAGTTCTGGCATATACGGGATATGATATGGAGGATGCTATGATTCTAAATAAGTCATCAGTGGAGCGTGGAATGTTTCATGGACAAATATATCAGACAGAAACTATTGACTTAACTGAACAAGGGGGAAGGTCAGACCGATCTTCAAGAATGTTCAGAAAAAGTAATATAGAGAAATCAGCTTGTCCGTCCATTGATTCAGATGGACTTCCACATGTTGGTCAGATGATACGGCCAGATGAACCCTATTGTAGCATTTATAATGAAGTAACAAGTTCCATACACACCTTAAAAAGAAAGGGTTCTGAAGCTGTTTATGTTGACTATGTTGCTGCTGATGTAAAAAACAAGAAGCACCTTCAGAAGGTTAACATACGTTTTCGACATCCCCGGAACCCTGTTATTGGTGATAAATTTAGCAGCAGACATGGGCAGAAAGGTGTTTGCTCTCAGCTGTGGCCAGATGTTGATATGCCATTTTCTGGAACTACTGGGATGCGCCCAGATCTCATTATCAATCCTCATGCATTTCCTTCCAGGATGACAATTGCTATGCTTTTGGAATCTGTTGCTGCTAAGGGAGGTAGCTTACGTGGAGAATTTGTAGATGCAACTCCATTTCGAAGTTCGGTTACGAAAGACAGTGGGGAGTCTGATTCAAAATCAGGTTCACTTGTCGATGATCTTGGCCTTCTGCTAAGAGAAAAGGGATTTAATTATCATGGTTTGGAGGTTCTATACAGTGGTGTTTATGGAACAGAACTAACATGTGAGATATTTATTGGACCTGTTTATTATCAGCGGCTGCGTCACATGGTTTCAGACAAATTTCAGGTTCGATCTACTGGCACAATTGACCAGGTCACCCGGCAGCCGATAAAAGGACGAAAGCGTGGTGGGGGAATTCGATTTGGAGAAATGGAACGCGACTCTCTGCTTGCACATGGAGCTGCATATCTTCTGCATGATAGGTTGCACACCTGTTCTGATTATCACATTGCCGATGTTTGTTCACTTTGTGGAAGCATGCTTGCAACAACATTCATCCAACCTCAAAAGCGGCCAGTTCGGGAGATTGGTGGGCTACCCCCTGGAAGAGCTCCGAAAAAGGTCACTTGTCATGCTTGCCAAACGAGTAAGGGCATGGAGACAGTCGCCATGCCCTATGTATTTAGATATTTGGCTGCTGAGTTAGCAGCAATGAATATAAAAATGACTCTTAAGCTCAGTGATGGAGCCGGAGTTGGAGCGTGA
Predicted protein sequences of Glyma.13g192600
>Glyma.13g192600.1.p sequence-type=predicted peptide transcript=Glyma.13g192600.1 locus=Glyma.13g192600 id=Glyma.13g192600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVAKPGSVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDGAGVGA*

>Glyma.13g192600.2.p sequence-type=predicted peptide transcript=Glyma.13g192600.2 locus=Glyma.13g192600 id=Glyma.13g192600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVAKPGSVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQLCRLFYLSPGLMQSKLCNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDGAGVGA*






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