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Report for Sequence Feature Glyma.13g182500

Feature Type:gene_model
Chromosome:Gm13
Start:28977112
stop:28980834
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g182500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G61040.1AT VIP5 JGI N/AIEA
GO:0006368GO-bp transcription elongation from RNA polymerase II promoter JGI N/AIEA
GO:0016570GO-bp histone modification JGI N/AIEA
GO:0016593GO-cc Cdc73/Paf1 complex JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
K15178KEGG Transcription machinery JGI N/AIEA
KOG2402 KOG Paf1/RNA polymerase II complex, RTF1 component (involved in regulation of TATA box-binding protein) JGI N/AIEA
PTHR13115PantherFam UNCHARACTERIZED JGI N/AIEA
PTHR13115:SF8PantherFam RNA POLYMERASE-ASSOCIATED PROTEIN RTF1 HOMOLOG JGI N/AIEA
PF03126Pfam Plus-3 domain JGI N/AIEA

Gene model name correspondences to Glyma.13g182500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g25093 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g182500
>Glyma.13g182500.1 sequence-type=CDS polypeptide=Glyma.13g182500.1.p locus=Glyma.13g182500 id=Glyma.13g182500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGATTTGGAGAATTTGCTTTTGGAGGCTGCGGGGAGAACTGGTACAGCTGGTAGAAATCGTCATTCTCTTCCACCTTCAAGGAGACGACATGATGGCGCCTATTCAGATGGTGGGAGTGATTCTAGGGATGACGATTCAGATGACGAACTCAATTATGCAAGCAGAAAGCCCTCTGGATCACAAGTTCCTCTGAAGAAAAGACTAGATCCAACAGAAAGAGATGATGATTTAGGCAGTCAGGAAGAAGCAGATGATGATGGTCGCAGCGATCATGATGGTGATAGCAGTGATGAATCAAATATTGGCGATGATCTCTACAAGGATGAGGATGACAGGCGAAAGCTTTCTGAGATGACTGAACTTCAAAGAGAGATGATCTTATCGGACAGGGCTACAAAAAAGGATGATAAAAATTTGTTGGGAAAGATAGCATCAAAGCGTGAGAAAGGAAAGGCAGCAGCACCCAGAAAACAGTCTCCCCCCATGTCGTCATCGCGCATGCGTGCATCAGCCAGATCTGCTGACAGGTCAGCCAAGAATGATGCGTTAAATGAATTGCGTGCAAAGCGATTGAAACAGCAAGATCCGGAAGCTCACCGGAGACTGAGAGAGGCATCAAGAAATGCAGGGCCCCGGCATTTTTCTCCGCCAAAGCGCAAAACGTTCACATCAACAAGTCTCAGTAGTTCAAGTCATAGTGAGAGTGAAAGTAGGTCCCATAGTGACGATGAAGGGTCAACTGGGGATGGAGGAATTGCTGACAGTGATGATGACAGGGCACTAGCTGGGTCTGAGGGTCCATCATTTCAGGATATAAAGGAAATAACTATTCGCAGATCAAAACTTGCCAAATGGTTTATGGAGCCTTTCTTTGAGGAGTTAATAGTTGGTTGCTTTGTAAGAGTGGGAATTGGTAGATCAAAAACTGGACCAATCTACCGACTCTGCATGGTGAAAAATGTTGATGCTTCAGAACCTGATCGACAGTATAAATTAGAAAATAAAACTACCTACAAGTATTTGAATGTTGTTTGGGGAAATGAAAGTTCTGCTGCTAGGTGGCAAATGGCTATGGTTAGTGACTCTGCTCCAATGGAAGAGGAGTTCAAACAGTGGGTTAAGGAAGTAGATTGCAGTGGCGGCCGGATGCCAAGTAAACAAGACGTGCTAGAAAAAAAGCAAGCTATCCAAAAAGCCATCACATTTGTCTACTCAGCGGCTACTGTGAAGCAGATGTTACAAGAGAAAAAGTCTGCCTCAACAAGGCCACTGAATGTTGCTGCTGAGAAGGATCGGCTGAGGAGGGAATTGGAAATAGCACAAAGTAAGCATGATGAGGCAGAAGTGGAGAGGATCAAGACAAGACTGCAAGAATTAGAGGCATCGAGACAAGCAAAGCAGAAGGATGCCAAGGCATTGAAACTGGCTGAGATGAATAGAAAAAACAGGTTTGAGAACTTCAAGAATGCTTCTGAATTGAAGCCAGTGAATATAGGTTTGAAAGCAGGGGAGGCAGGTTATGATCCATTTTCAAGGAGATGGACTAGATCAAGGAATTACTATGCTGCAAAACCTGGTGAAAAGGCTGCAGCTGGAAATAATATTGTCAATGGCAATGTGGCTGGTGCTGGCAGCAATGCAACAGGAGCACCAGTGACAGCCGAGGCTGGCATGGTGGCTACCGCTGCTGCCTTGGAAGCTGCTGCTGGTGCTGGGAAGTTGGTGGATACAAGTGCTCCTGTGGATCAAGGGACAGAGTCAAATATGCTGCACAATTTCGAGCTGCCAATTTCATTAGCATTACTTCAAAAGTATGGTGGGGCTCCAGGAGCTCAGGCAGGATTTATGGCAAGAAAACAAAGAATAGAATCAACAGTTGGATTTAGAGTCTCTGAAAATGATGGTAGGAGGCATGCGTTGACGCTGACAGTCAGTGATTACAAAAGAAGAAGAGGGCTTCTTTGA
Predicted protein sequences of Glyma.13g182500
>Glyma.13g182500.1.p sequence-type=predicted peptide transcript=Glyma.13g182500.1 locus=Glyma.13g182500 id=Glyma.13g182500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPSGSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSRMRASARSADRSAKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESESRSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAEMNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNIVNGNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL*






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