SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g172500

Feature Type:gene_model
Chromosome:Gm13
Start:28065998
stop:28070607
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g172500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G45960.1AT JGI N/AIEA
3.1.1.3EC triacylglycerol lipase JGI N/AIEA
GO:0016788GO-mf hydrolase activity, acting on ester bonds JGI N/AIEA
PTHR22835PantherFam ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN JGI N/AIEA
PF00657Pfam GDSL-like Lipase/Acylhydrolase JGI N/AIEA

Gene model name correspondences to Glyma.13g172500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g24130 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g172500
>Glyma.13g172500.1 sequence-type=CDS polypeptide=Glyma.13g172500.1.p locus=Glyma.13g172500 id=Glyma.13g172500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGCCTCTAACTCACATTCGTTTCTCTCTCTTGTGCACCTTTTTGTGCTTTTCTTATTGTTATGTTTTGTGGTTACAATTGAAGCTAATTCAAAGAAGAAGGTCTCAGCCTTTTATGTGTTTGGAGACTCCACAGTAGACCCAGGAAACAACAACTTCATAGACACGGCTTTCAGGAGCGATTTTCCTCCCTATGGTAGAGATTTTGTTAACCAGGCTGCCACTGGAAGGTTCACCAATGGGAAGCTTGGCACTGATTTTCTTGCTTCATATCTGGGCCTAAAAGAGTTGGTGCCGCCATATTTGGATCCAAATCTCAGCGACAAAGAACTTGTAACTGGTGTCAGTTTTGCCTCTGCTGGTTCTGGGTTTGACCCTCTCACTCCAATGCTGGGGAATGTAATTCCAGTAGCAAAGCAGTTGGAATATTTCAAAGAATACAAAAAGAGGTTAGAGGGTACGCTTGGTAAGAAAAGAACCGAATATCATATAAGCAATGCTTTATTTTTCATCAGCGCAGGCACAAATGACTACGTCATTAACTATTTTTCGTTGCCAATACGAAGAAAGACCTACACCACCCCCTTAACCTACGGACACTTCTTGCTTCAACACGTAAAAGAATTCATACAGAATTTATGGAAAGAAGGTGCACGGAAAATAGCTTTGGTTGGAGTACCTCCAATGGGATGCTTGCCGATCATGATCACCTTGAATTCCCATAATGTCTTTCTCGAACGTGGTTGTGTGGACAAGTATTCTGCTGTTGCAAGAGATCACAATATGATGCTTCAACATGAATTGTTCTTAATGCAACTAAATTTCTCCAATACTAACCCTGCCGGTGCTAAAATATCTTACCTCGACATATATGGACCCTTGGATGACATGATTCAAGCGCATCAAAACCTAGGTTTTGATGAGGTTGATCGTGGTTGTTGTGGAAGTGGTTACATCGAAGCAACTTTTATGTGTAATGGGGTTTCATATGTGTGCTCTGATCCATCTAAGTTTGTCTTCTGGGATTCAATACACCCTACGGAGAAGGCATACTATGACCTATTTATGGCCGCCCGTCCCACAATTGATGCCCTTATCAATGGCTAG

>Glyma.13g172500.2 sequence-type=CDS polypeptide=Glyma.13g172500.2.p locus=Glyma.13g172500 id=Glyma.13g172500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGCCTCTAACTCACATTCGTTTCTCTCTCTTGTGCACCTTTTTGTGCTTTTCTTATTGTTATGTTTTGTGGTTACAATTGAAGCTAATTCAAAGAAGAAGGTCTCAGCCTTTTATGTGTTTGGAGACTCCACAGTAGACCCAGGAAACAACAACTTCATAGACACGGCTTTCAGGAGCGATTTTCCTCCCTATGGTAGAGATTTTGTTAACCAGGCTGCCACTGGAAGGTTCACCAATGGGAAGCTTGGCACTGATTTTCTTGCTTCATATCTGGGCCTAAAAGAGTTGGTGCCGCCATATTTGGATCCAAATCTCAGCGACAAAGAACTTGTAACTGGTGTCAGTTTTGCCTCTGCTGGTTCTGGGTTTGACCCTCTCACTCCAATGCTGGGGAATGTAATTCCAGTAGCAAAGCAGTTGGAATATTTCAAAGAATACAAAAAGAGGTTAGAGGGTACGCTTGGTAAGAAAAGAACCGAATATCATATAAGCAATGCTTTATTTTTCATCAGCGCAGGCACAAATGACTACGTCATTAACTATTTTTCGTTGCCAATACGAAGAAAGACCTACACCACCCCCTTAACCTACGGACACTTCTTGCTTCAACACGTAAAAGAATTCATACAGAATTTATGGAAAGAAGGTGCACGGAAAATAGCTTTGGTTGGAGTACCTCCAATGGGATGCTTGCCGATCATGATCACCTTGAATTCCCATAATGTCTTTCTCGAACGTGGTTGTGTGGACAAGTATTCTGCTGTTGCAAGAGATCACAATATGATGCTTCAACATGAATTGTTCTTAATGCAACTAAATTTCTCCAATACTAACCCTGCCGGTGCTAAAATATCTTACCTCGACATATATGGACCCTTGGATGACATGATTCAAGCGCATCAAAACCTAGGTAATTAA
Predicted protein sequences of Glyma.13g172500
>Glyma.13g172500.1.p sequence-type=predicted peptide transcript=Glyma.13g172500.1 locus=Glyma.13g172500 id=Glyma.13g172500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEASNSHSFLSLVHLFVLFLLLCFVVTIEANSKKKVSAFYVFGDSTVDPGNNNFIDTAFRSDFPPYGRDFVNQAATGRFTNGKLGTDFLASYLGLKELVPPYLDPNLSDKELVTGVSFASAGSGFDPLTPMLGNVIPVAKQLEYFKEYKKRLEGTLGKKRTEYHISNALFFISAGTNDYVINYFSLPIRRKTYTTPLTYGHFLLQHVKEFIQNLWKEGARKIALVGVPPMGCLPIMITLNSHNVFLERGCVDKYSAVARDHNMMLQHELFLMQLNFSNTNPAGAKISYLDIYGPLDDMIQAHQNLGFDEVDRGCCGSGYIEATFMCNGVSYVCSDPSKFVFWDSIHPTEKAYYDLFMAARPTIDALING*

>Glyma.13g172500.2.p sequence-type=predicted peptide transcript=Glyma.13g172500.2 locus=Glyma.13g172500 id=Glyma.13g172500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEASNSHSFLSLVHLFVLFLLLCFVVTIEANSKKKVSAFYVFGDSTVDPGNNNFIDTAFRSDFPPYGRDFVNQAATGRFTNGKLGTDFLASYLGLKELVPPYLDPNLSDKELVTGVSFASAGSGFDPLTPMLGNVIPVAKQLEYFKEYKKRLEGTLGKKRTEYHISNALFFISAGTNDYVINYFSLPIRRKTYTTPLTYGHFLLQHVKEFIQNLWKEGARKIALVGVPPMGCLPIMITLNSHNVFLERGCVDKYSAVARDHNMMLQHELFLMQLNFSNTNPAGAKISYLDIYGPLDDMIQAHQNLGN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo