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Report for Sequence Feature Glyma.13g172100

Feature Type:gene_model
Chromosome:Gm13
Start:28029186
stop:28034007
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g172100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G29120.1AT ATGLR2.7,GLR2.7 JGI N/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0004970GO-mf ionotropic glutamate receptor activity JGI N/AIEA
KOG1052 KOG Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits JGI N/AIEA
PTHR18966PantherFam IONOTROPIC GLUTAMATE RECEPTOR JGI N/AIEA
PF00060Pfam Ligand-gated ion channel JGI N/AIEA
PF00497Pfam Bacterial extracellular solute-binding proteins, family 3 JGI N/AIEA
PF13458Pfam Periplasmic binding protein JGI N/AIEA

Gene model name correspondences to Glyma.13g172100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g24080 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g172100
>Glyma.13g172100.1 sequence-type=CDS polypeptide=Glyma.13g172100.1.p locus=Glyma.13g172100 id=Glyma.13g172100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATCTTCCATCCACTATTCCTCTAGCACTTCCAACCTATTTATTCATTTCGTTTGTTCTAGTTAATTGCTACCATGCTGAGGCTACAAATGGAGACGACATGGTTATATCTATAGGAGCAATAATTGATGTTAACTCTCGGGTTGGGAAAGAACAGCTTGTAGCCATGGACCTTGCAGCTCAAAGTCACAATAACACTTCCAAGAGCCACAAGATGGCCCTTCATTTTCAGGAACCCACCAAAGATCCCTTCGGACCCACTTCTCTTGCTAGAAATATGATTAAAACACAGAAGGCGCAAGTGATTATAGGGATGCACACATGGACAGAAGCAGCTTCAGTGGCTGAATTAGGACGCGAAACTCTAGTTCCTGTCATATCCTTTGCAGCACCTACCATCACCCCACCATTGATGCCAACTCGCTGGCCTTTTTCGGTAAGAATGGCCAACAATGGTACTGCATATGCAAAATGTGTTGCAGATGTAGTACATGCTTATGGTTGGCAAAGAGTAGTAGTCATTTATGAAGATGGAGATTATGAGATGCTAGCTTTGCTATCTGAGACCCTCCAAGAAGTTGGTTCAATGATTGAGTACCGTTTAGCTCTTCCATCGCCTTCTTATCTACCTAATCCTGGAGAGTTTATTCGCGAAGAGTTGTATAATTTGATTAAAAATATACAATCCCGGGTGTTCATTGTTCTGCAATCATCATTAGAAATGGTGATCCATTTGTTCAGAGAAGCTTCACACATGGGACTTGTGGAAAGAGAATCAGCTTGGATAATCCCAGAGAGCATAACTAATTTGCTTGACACTGTCAACAAGTCTGCTATTTCCTACATGGAAGGAGCTTTAGGAATCAAGACCTACTACTCTAACCATAGCAATGAATATCAAGACTTTGAGGCTCAGTTCCGAAAATCTTTTCGGGCCAAGTATCCTGAGGAGGATAACTGTGATCCGGGATTTTACGCTCTGCAAGCATATGATAGCATTAAAATTGTTGCGCAAGCAATAGATAGAACGGCCAGTGGCAGAAAGACTTTGCTAACAGAAATACTATCTAGCAATTTCCCTGGCTTAAGTGGAGAAATTCGATTTGAAGCAGCCCAACTCTTGCAGAATCCTACCTTCAGGATGGTGAATGTAGATAAGAAGAGTTACAGAGAATTAGACTTTTGGACTCTAAAACGCGGGTTCATCACTAGCCTCACTACAGAACAAGGTTCAGATAGTGTTTCTAGGAACACAGAGAGTTTACGTGGTGTAATATGGCCAGGGAAACTAGTTAGATTTCCGAAGGGCTGGAATCTGCCTACTAAACAAAATCCAATGCAAATAGCAGTTCCTGGAAGAACCTCCTTTCCCGCGTTTGTTAAGGTTGATCCTGACGAGCATCATAATTCATATAAATTTAATGGATTCTGCATTGAACTTTTTAATAAGGTGATAGGGATTTTGAAGTATGATCTGCCGCATGAGTTTCATCCCATCAACGGAACCTATAACGATCTGGTTCAACTTGTCTATAACAAGTCTTACGCGGCAGCTATTGGAGACGTGACCATAACAGAAGACAGATTGAAATATGTAGACTTTACTGCGTCATATGCAGAATCAGGATTGTCAATGATAGTTACAGAAGAGTTCAAAGCACCGACATGGATGTTTACGAAGCCCTTCACCTGGCAAATGTGGTTGGCAACTGGTGCCGTGTTGATTTATACAATGGTAGTTGTGTGGTACCTTGAGAGGGAACCCAATCCTGAGTTTCATGGCAATTTGCAAAGCCAGATCAGCACTGCTCTTACGTTTACCTTCTCCTCTCTATTCTTTGCTCACAGGGAGAAAATCTATAGCCACTTATCTCGCATGGTGATGGTATCGTGGATGTTTCTAGTATTGATTCTTAGCTCAAGCTACACTGCTAGTCTTTCTTCGATTCTCACAGTTCAACGACTGCAACCAACTGTGACAGACATCCAGATCCTGAAGAACAACAACAAGAAAATTGGTTGTGACGGAGATTCATTTGTTAGGACATACCTGGAGACAGTCGAAGAGTTCAAGCCAGAGAACATCATAAACATTGGCAGTGAAAACAGTTATGATGATGCATTCAAAAACAACTCAATAGCAGCTGCTTTTCTCGAACTCCCTTATGAGAAAGTATATATCAGTAAATACTGCAAGGGATACTATGCCTTTGCAATCAACAAAAAATTTGGAGGACTGGGATTTATCTTCCAGAAAGGCTCACCAGTGGCCAGAGATTTTTCCAAAGCTATACTGCGTCTCTTGGAGGATGGAACAGTGAAGGAATTAGAAGACAAATGGTTGAAACCTGATGGAGACTGCCACAATAATTCGACCTCACAGGGTACAGAAAGTTTGAGGCTTGAAAGTTTCTGGGTTCTGTATGTGATCTATGGTGCCGCTTCTACTATTTGTTTTCTACTTCATACAATCCTGTCGCTGAAATCTAGACAAACAACCCGGGATGAGGCACGAGAAGGTAATGCCAACCCAGGTGAGGAAAGCCGATGA
Predicted protein sequences of Glyma.13g172100
>Glyma.13g172100.1.p sequence-type=predicted peptide transcript=Glyma.13g172100.1 locus=Glyma.13g172100 id=Glyma.13g172100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNLPSTIPLALPTYLFISFVLVNCYHAEATNGDDMVISIGAIIDVNSRVGKEQLVAMDLAAQSHNNTSKSHKMALHFQEPTKDPFGPTSLARNMIKTQKAQVIIGMHTWTEAASVAELGRETLVPVISFAAPTITPPLMPTRWPFSVRMANNGTAYAKCVADVVHAYGWQRVVVIYEDGDYEMLALLSETLQEVGSMIEYRLALPSPSYLPNPGEFIREELYNLIKNIQSRVFIVLQSSLEMVIHLFREASHMGLVERESAWIIPESITNLLDTVNKSAISYMEGALGIKTYYSNHSNEYQDFEAQFRKSFRAKYPEEDNCDPGFYALQAYDSIKIVAQAIDRTASGRKTLLTEILSSNFPGLSGEIRFEAAQLLQNPTFRMVNVDKKSYRELDFWTLKRGFITSLTTEQGSDSVSRNTESLRGVIWPGKLVRFPKGWNLPTKQNPMQIAVPGRTSFPAFVKVDPDEHHNSYKFNGFCIELFNKVIGILKYDLPHEFHPINGTYNDLVQLVYNKSYAAAIGDVTITEDRLKYVDFTASYAESGLSMIVTEEFKAPTWMFTKPFTWQMWLATGAVLIYTMVVVWYLEREPNPEFHGNLQSQISTALTFTFSSLFFAHREKIYSHLSRMVMVSWMFLVLILSSSYTASLSSILTVQRLQPTVTDIQILKNNNKKIGCDGDSFVRTYLETVEEFKPENIINIGSENSYDDAFKNNSIAAAFLELPYEKVYISKYCKGYYAFAINKKFGGLGFIFQKGSPVARDFSKAILRLLEDGTVKELEDKWLKPDGDCHNNSTSQGTESLRLESFWVLYVIYGAASTICFLLHTILSLKSRQTTRDEAREGNANPGEESR*






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