Report for Sequence Feature Glyma.13g169500
| Feature Type: | gene_model |
| Chromosome: | Gm13 |
| Start: | 27769723 |
| stop: | 27777981 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.13g169500
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT3G01480.1 | AT |
ATCYP38,CYP38 |
JGI | N/A | IEA |
| 5.2.1.8 | EC |
peptidylprolyl isomerase |
JGI | N/A | IEA |
| GO:0000413 | GO-bp |
protein peptidyl-prolyl isomerization |
JGI | N/A | IEA |
| GO:0006457 | GO-bp |
protein folding |
JGI | N/A | IEA |
| GO:0003755 | GO-mf |
peptidyl-prolyl cis-trans isomerase activity |
JGI | N/A | IEA |
| KOG0884 |
KOG |
Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase |
JGI | N/A | IEA |
| PTHR11071 | PantherFam |
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
JGI | N/A | IEA |
| PF00160 | Pfam |
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD |
JGI | N/A | IEA |
Proteins Associated with Glyma.13g169500
| Locus | Gene Symbol | Protein Name |
|---|
| | CYP53 | peptidyl-prolyl cis-trans isomerase CYP53 |
Gene model name correspondences to Glyma.13g169500 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma13g23850 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.13g169500
>Glyma.13g169500.1 sequence-type=CDS polypeptide=Glyma.13g169500.1.p locus=Glyma.13g169500 id=Glyma.13g169500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGCCATCATCCCCTGCCACTACTGTGCTTCCCTCAGTCCTAGATGGTTCAATTCCAACAACACACATTCTAGGCGTTTATCCTACCCACTTCGAGGACTCCGAGGTTTGAATGCTCGTTGCTCTTACCAACCACCCCATCATTCTGAATCTCCGAACAACCATAATGGGAGGTCATTTTCCTTGAAGCAGTGTGCAATATCTATTGCACTGGCGGTTGGGTTAATAACAGGAGTTCCTACATTGGAGGGTCCCACCATTGCCCAAGCAGCTAATCCTGCATTGTCTGATCTGTCTGTTTTGATTTCTGGACCTCCAATTAAGGATCCTGGGGCATTGTTGAGATATGCTCTTCCTATTGACAATAAGGCCATTAGAGAAGTGCAAAAACCACTTGAAGATATCACAGAGAGTCTCAAGATTGCTGGAGTCAAGGCACTTGACTCTGTGGAAAGAAATGTGAGGCAGGCGTCTCGAGCTCTGAAGCAAGGGAAGACTTTAATTGTATCTGGTTTAGCTGAATCAAAGAAAGAACATGGAGTTGAACTGCTTAACAAGCTGGAAGCTGGTATAGATGAGCTTGAACTGATAGTACAGGATAGGAATCGAGATGCAGTTGCACCAAAACAGAAAGAGCTTCTTCAATATGTTGGAGGTGTTGAAGAAGACATGGTTGATGGCTTCCCATTTGAAGTACCTGAGGAATACCAAAATATGCCTTTATTGAAGGGGAGAGCAGCAGTGGATATGAAGGTCAAGGTTAAAGACAATCCAAACCTGGATGAATGTGTTTTCCACATCGTTCTTGATGGTTATAATGCCCCTGTAACTGCTGGAAATTTTGTTGATTTGGTAGAAAGGCACTTCTATGATGGCATGGAAATCCAAAGAGCGGATGGGTTTGTTGTCCAAACTGGTGATCCTGAAGGACCTGCTGAGGGTTTTATTGATCCAAGTACAGAGAAAATCAGGACAATACCATTAGAAATTACGGTGAATGGAGAAAAGGCACCTGTTTATGGATCAACTTTAGAGGAGCTTGGTCTATACAAGGCTCAAACAAAGCTTCCCTTTAATGCTTTCGGTACAATGGCAATGGCAAGAGATGAATTTGAGGACAACTCTGCCTCCAGCCAGATATTTTGGCTATTGAAAGAAAGTGAGCTAACTCCCAGTAATGCCAATATATTGGATGGTCGATATGCAGTCTTTGGCTATGTAACAGAAAATGAGGATTACTTGGCAGACCTCAAAGTTGGTGATGTCATAGAATCCATTAAAGTAGTTTCTGGGCTGGATAATTTGGTAAATCCAACCTACAAAATTGCTGGCTAG
Predicted protein sequences of Glyma.13g169500
>Glyma.13g169500.1.p sequence-type=predicted peptide transcript=Glyma.13g169500.1 locus=Glyma.13g169500 id=Glyma.13g169500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAIIPCHYCASLSPRWFNSNNTHSRRLSYPLRGLRGLNARCSYQPPHHSESPNNHNGRSFSLKQCAISIALAVGLITGVPTLEGPTIAQAANPALSDLSVLISGPPIKDPGALLRYALPIDNKAIREVQKPLEDITESLKIAGVKALDSVERNVRQASRALKQGKTLIVSGLAESKKEHGVELLNKLEAGIDELELIVQDRNRDAVAPKQKELLQYVGGVEEDMVDGFPFEVPEEYQNMPLLKGRAAVDMKVKVKDNPNLDECVFHIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKIRTIPLEITVNGEKAPVYGSTLEELGLYKAQTKLPFNAFGTMAMARDEFEDNSASSQIFWLLKESELTPSNANILDGRYAVFGYVTENEDYLADLKVGDVIESIKVVSGLDNLVNPTYKIAG*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
