Glyma.13g161900

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Report for Sequence Feature Glyma.13g161900

Feature Type:	gene_model
Chromosome:	Gm13
Start:	27748190
stop:	27752685
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.13g161900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G34850.1	AT	purple acid phosphatase 26	JGI	N/A	IEA
GO:0016311	GO-bp	dephosphorylation	EnsemblGenomes	N/A	IEA
GO:0003993	GO-mf	acid phosphatase activity	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	JGI	N/A	IEA
GO:0046872	GO-mf	metal ion binding	EnsemblGenomes	N/A	IEA
KOG1378	KOG	Purple acid phosphatase	JGI	N/A	IEA
PTHR22953	Panther	ACID PHOSPHATASE RELATED	JGI	N/A	IEA
PF00149	PFAM	Calcineurin-like phosphoesterase	JGI	N/A	IEA
PWY-6348	SoyCyc9	phosphate acquisition	Plant Metabolic Network		ISS
GN7V-43544	SoyCyc9-rxn	Enzyme name not determined	Plant Metabolic Network		ISS

Proteins Associated with Glyma.13g161900

Locus	Gene Symbol	Protein Name
	Phy	Phytase, bifunctional purple acid phosphatase 26-like

Expression Patterns of Glyma.13g161900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.13g161900 not represented in the dataset	Glyma.13g161900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.13g161900

Paralog	Evidence	Comments
Glyma.17g109400	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.13g161900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma13g23090	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.13g161900

Limit To All Plant Sequences

>Glyma.13g161900.2 sequence-type=transcript locus=Glyma.13g161900 ID=Glyma.13g161900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTATAAATCAATCAATTGGCTTCTTCTTTTTTCTCATCACTCGGGTGGCGTGCTTTGGCTTCCCTTCCCCCTCTTCTTAGCAAATGTTTCAATATTCCAAGGCCATGTTGCTTAATTTAGTTCTTGTTTCCTTTGTCCTCTTGAGTTCTATCAGAGATGGGAGTGCAGGGATCACCAGCTCTTTCGTTCGGCCACAGTGGCCAGGAGTTGACATTCCCGTGGATCATGAAGTATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATAGTCTCATGGGTGACCCCAGATGAACCAGGGACTCGCCATGTGCAATATGGCACATCAAAGGATAAGTTTAAAACTAGTGCAGAAGGCACAGTTGCAAACTACACTTTCTATAACTACAAGTCTGGCTACATTCATCATTGTCTTATTGAAGGCCTTGAGTATAAGACAAAATACTACTATAGAATTGGAAGTGGTGATTCTGCTCGAGACTTTTGGTTCGAAACACCTCCTAAAGTTGGGCCAGATACTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCGACCCTTGAGCATTATTTGGAGAGTGGAGGAGAGGCTGTGTTATATGTTGGAGATCTTTCTTATTCTGATGAACATGACTACAAAGATATGGGTTTACGGTGGGATACATGGGGCCGATTTGCTGAAAGGAGTGCAGCATATCAGCCATGGATGTGGAATGTGGGAAACCACGAAGTAGAGTTTTTGCCTGAAGTGGGAGAAGTTGAACCTTTCAAAAACTATCTTTACCGATATACTACTCCCTATTCGGCTTCCAAAAGCACCAGCCCCCTCTGGTATGCAGTCAGGCGTGCCTCTGCTCATATCATTGTGCTATCAAGCTATTCTCCATTTGTGAAGTACACGCCTCAATACATATGGCTTAAAGAAGAGCTGGCGCGGGTTGATAGAAAGAAGACACCTTGGCTCATTGTGCTCGTGCACAAGCCACTCTACAGCAGCAACGTAGCTCACTACATGGAGGGTGAAGCCATGCGATCAGTTTTTGAGACATGGTTCGTCCAATACAAAGTTGATGTCATCTTTGCCGGCCATGTCCATGCTTATGAAAGATCATATCGATACTCCAATATAGACTACAACATAACTGGCGGTAGAAGGTATCCCATACCTGACAAATCAGCACCTATTTACATAACAATCGGAGATGGAGGAAATCTAGAAGGTCTTGCCTCAAGTTATTTGGATCCACAGCCAGAATATTCTGCATTCAGAGAAGCGAGCTATGGACACGCCACACTGGAGATAAAAAACAGGACCCATGCTATCTACCACTGGTATCGCAATGATGACGGAAAGAAAGTCCCAGCTGACTCTCTCGTATTGCATAACCAGTATTGGTAGGTTCTTCATTCCACCTTTTCTTTGGCAGTGGCAAGGAAAAATATGAATGTCATTATCTCGTTGTTACGATGAATCATGAATTATAAGACCGACAGAAAGTAAGATGTCACGAATGATGTCATCGACATATTCTCCGCTACATGCATTTCCTCATCAATTTTGGTTGTGTTATATTTTCTTCTTTGTATCATGTTGGGAACCTCCGTAAGTTAATTAATCTCTCTCGTGGAGACTCAGAACTGCTATACATTATATCATAAACCGCCGGAAATTTCTTGCATGAAAAATAAAAGGAAGCCATACTTGATACTCCATTACTACtatatatatatatatatatatatatatG

>Glyma.13g161900.3 sequence-type=transcript locus=Glyma.13g161900 ID=Glyma.13g161900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGCTACTTAACCTAATACAAGTTGCTTGGATGCCATGTTGCTTAATTTAGTTCTTGTTTCCTTTGTCCTCTTGAGTTCTATCAGAGATGGGAGTGCAGGGATCACCAGCTCTTTCGTTCGGCCACAGTGGCCAGGAGTTGACATTCCCGTGGATCATGAAGTATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATAGTCTCATGGGTGACCCCAGATGAACCAGGGACTCGCCATGTGCAATATGGCACATCAAAGGATAAGTTTAAAACTAGTGCAGAAGGCACAGTTGCAAACTACACTTTCTATAACTACAAGTCTGGCTACATTCATCATTGTCTTATTGAAGGCCTTGAGTATAAGACAAAATACTACTATAGAATTGGAAGTGGTGATTCTGCTCGAGACTTTTGGTTCGAAACACCTCCTAAAGTTGGGCCAGATACTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCGACCCTTGAGCATTATTTGGAGAGTGGAGGAGAGGCTGTGTTATATGTTGGAGATCTTTCTTATTCTGATGAACATGACTACAAAGATATGGGTTTACGGTGGGATACATGGGGCCGATTTGCTGAAAGGAGTGCAGCATATCAGCCATGGATGTGGAATGTGGGAAACCACGAAGTAGAGTTTTTGCCTGAAGTGGGAGAAGTTGAACCTTTCAAAAACTATCTTTACCGATATACTACTCCCTATTCGGCTTCCAAAAGCACCAGCCCCCTCTGGTATGCAGTCAGGCGTGCCTCTGCTCATATCATTGTGCTATCAAGCTATTCTCCATTTGTGAAGTACACGCCTCAATACATATGGCTTAAAGAAGAGCTGGCGCGGGTTGATAGAAAGAAGACACCTTGGCTCATTGTGCTCGTGCACAAGCCACTCTACAGCAGCAACGTAGCTCACTACATGGAGGGTGAAGCCATGCGATCAGTTTTTGAGACATGGTTCGTCCAATACAAAGTTGATGTCATCTTTGCCGGCCATGTCCATGCTTATGAAAGATCATATCGATACTCCAATATAGACTACAACATAACTGGCGGTAGAAGGTATCCCATACCTGACAAATCAGCACCTATTTACATAACAATCGGAGATGGAGGAAATCTAGAAGGTCTTGCCTCAAGTTATTTGGATCCACAGCCAGAATATTCTGCATTCAGAGAAGCGAGCTATGGACACGCCACACTGGAGATAAAAAACAGGACCCATGCTATCTACCACTGGTATCGCAATGATGACGGAAAGAAAGTCCCAGCTGACTCTCTCGTATTGCATAACCAGTATTGGGGAAGCAATGGAAGAAAACAGAATGAGGTTATTGATGAAGTTGTCAATGTTAAATGAAGTTGGAGCACTCGTAAATCGTAAATATGGTGTTTTGAAAAGAATAAAAATGTGCCTATATATTGTAATGTATGTAGTTCAATAGTCTCCGAGCGTGCGAAAAGGTTCCATTCCATGTACTTGGCTTGTATTATACAGCTAGCGCTAAGAAATATTAAATAAACGCGCTTTTAGCAAGGAGAAAACAATCGAGACCAAGATATTATCTGTTCACATCTGTGTATAATTTTTGAAGCGTGGATTATTTTGCTGCTATTTGAGTGCTTTAGTGGGTATTATTATATCATGTCAACCTTCAGCAAAAATAATAATAATAAATTATATATATCATGTCAAC

Coding sequences of Glyma.13g161900

Limit To All Plant Sequences

>Glyma.13g161900.1 sequence-type=CDS polypeptide=Glyma.13g161900.1.p locus=Glyma.13g161900 ID=Glyma.13g161900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTCAATATTCCAAGGCCATGTTGCTTAATTTAGTTCTTGTTTCCTTTGTCCTCTTGAGTTCTATCAGAGATGGGAGTGCAGGGATCACCAGCTCTTTCGTTCGGCCACAGTGGCCAGGAGTTGACATTCCCGTGGATCATGAAGTATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATAGTCTCATGGGTGACCCCAGATGAACCAGGGACTCGCCATGTGCAATATGGCACATCAAAGGATAAGTTTAAAACTAGTGCAGAAGGCACAGTTGCAAACTACACTTTCTATAACTACAAGTCTGGCTACATTCATCATTGTCTTATTGAAGGCCTTGAGTATAAGACAAAATACTACTATAGAATTGGAAGTGGTGATTCTGCTCGAGACTTTTGGTTCGAAACACCTCCTAAAGTTGGGCCAGATACTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCGACCCTTGAGCATTATTTGGAGAGTGGAGGAGAGGCTGTGTTATATGTTGGAGATCTTTCTTATTCTGATGAACATGACTACAAAGATATGGGTTTACGGTGGGATACATGGGGCCGATTTGCTGAAAGGAGTGCAGCATATCAGCCATGGATGTGGAATGTGGGAAACCACGAAGTAGAGTTTTTGCCTGAAGTGGGAGAAGTTGAACCTTTCAAAAACTATCTTTACCGATATACTACTCCCTATTCGGCTTCCAAAAGCACCAGCCCCCTCTGGTATGCAGTCAGGCGTGCCTCTGCTCATATCATTGTGCTATCAAGCTATTCTCCATTTGTGAAGTACACGCCTCAATACATATGGCTTAAAGAAGAGCTGGCGCGGGTTGATAGAAAGAAGACACCTTGGCTCATTGTGCTCGTGCACAAGCCACTCTACAGCAGCAACGTAGCTCACTACATGGAGGGTGAAGCCATGCGATCAGTTTTTGAGACATGGTTCGTCCAATACAAAGTTGATGTCATCTTTGCCGGCCATGTCCATGCTTATGAAAGATCATATCGATACTCCAATATAGACTACAACATAACTGGCGGTAGAAGGTATCCCATACCTGACAAATCAGCACCTATTTACATAACAATCGGAGATGGAGGAAATCTAGAAGGTCTTGCCTCAAGTTATTTGGATCCACAGCCAGAATATTCTGCATTCAGAGAAGCGAGCTATGGACACGCCACACTGGAGATAAAAAACAGGACCCATGCTATCTACCACTGGTATCGCAATGATGACGGAAAGAAAGTCCCAGCTGACTCTCTCGTATTGCATAACCAGTATTGGGGAAGCAATGGAAGAAAACAGAATGAGGTTATTGATGAAGTTGTCAATGTTAAATGA

>Glyma.13g161900.2 sequence-type=CDS polypeptide=Glyma.13g161900.2.p locus=Glyma.13g161900 ID=Glyma.13g161900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTCAATATTCCAAGGCCATGTTGCTTAATTTAGTTCTTGTTTCCTTTGTCCTCTTGAGTTCTATCAGAGATGGGAGTGCAGGGATCACCAGCTCTTTCGTTCGGCCACAGTGGCCAGGAGTTGACATTCCCGTGGATCATGAAGTATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATAGTCTCATGGGTGACCCCAGATGAACCAGGGACTCGCCATGTGCAATATGGCACATCAAAGGATAAGTTTAAAACTAGTGCAGAAGGCACAGTTGCAAACTACACTTTCTATAACTACAAGTCTGGCTACATTCATCATTGTCTTATTGAAGGCCTTGAGTATAAGACAAAATACTACTATAGAATTGGAAGTGGTGATTCTGCTCGAGACTTTTGGTTCGAAACACCTCCTAAAGTTGGGCCAGATACTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCGACCCTTGAGCATTATTTGGAGAGTGGAGGAGAGGCTGTGTTATATGTTGGAGATCTTTCTTATTCTGATGAACATGACTACAAAGATATGGGTTTACGGTGGGATACATGGGGCCGATTTGCTGAAAGGAGTGCAGCATATCAGCCATGGATGTGGAATGTGGGAAACCACGAAGTAGAGTTTTTGCCTGAAGTGGGAGAAGTTGAACCTTTCAAAAACTATCTTTACCGATATACTACTCCCTATTCGGCTTCCAAAAGCACCAGCCCCCTCTGGTATGCAGTCAGGCGTGCCTCTGCTCATATCATTGTGCTATCAAGCTATTCTCCATTTGTGAAGTACACGCCTCAATACATATGGCTTAAAGAAGAGCTGGCGCGGGTTGATAGAAAGAAGACACCTTGGCTCATTGTGCTCGTGCACAAGCCACTCTACAGCAGCAACGTAGCTCACTACATGGAGGGTGAAGCCATGCGATCAGTTTTTGAGACATGGTTCGTCCAATACAAAGTTGATGTCATCTTTGCCGGCCATGTCCATGCTTATGAAAGATCATATCGATACTCCAATATAGACTACAACATAACTGGCGGTAGAAGGTATCCCATACCTGACAAATCAGCACCTATTTACATAACAATCGGAGATGGAGGAAATCTAGAAGGTCTTGCCTCAAGTTATTTGGATCCACAGCCAGAATATTCTGCATTCAGAGAAGCGAGCTATGGACACGCCACACTGGAGATAAAAAACAGGACCCATGCTATCTACCACTGGTATCGCAATGATGACGGAAAGAAAGTCCCAGCTGACTCTCTCGTATTGCATAACCAGTATTGGTAG

>Glyma.13g161900.3 sequence-type=CDS polypeptide=Glyma.13g161900.3.p locus=Glyma.13g161900 ID=Glyma.13g161900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGCTTAATTTAGTTCTTGTTTCCTTTGTCCTCTTGAGTTCTATCAGAGATGGGAGTGCAGGGATCACCAGCTCTTTCGTTCGGCCACAGTGGCCAGGAGTTGACATTCCCGTGGATCATGAAGTATTTGCAGTTCCAAAGGGTTATAATGCACCTCAACAAGTGCACATCACGCAAGGTGACTATGATGGAAAAGCAGTAATAGTCTCATGGGTGACCCCAGATGAACCAGGGACTCGCCATGTGCAATATGGCACATCAAAGGATAAGTTTAAAACTAGTGCAGAAGGCACAGTTGCAAACTACACTTTCTATAACTACAAGTCTGGCTACATTCATCATTGTCTTATTGAAGGCCTTGAGTATAAGACAAAATACTACTATAGAATTGGAAGTGGTGATTCTGCTCGAGACTTTTGGTTCGAAACACCTCCTAAAGTTGGGCCAGATACTCCCTACAAATTTGGGATCATTGGTGATTTGGGGCAAACGTTTAATTCTCTTTCGACCCTTGAGCATTATTTGGAGAGTGGAGGAGAGGCTGTGTTATATGTTGGAGATCTTTCTTATTCTGATGAACATGACTACAAAGATATGGGTTTACGGTGGGATACATGGGGCCGATTTGCTGAAAGGAGTGCAGCATATCAGCCATGGATGTGGAATGTGGGAAACCACGAAGTAGAGTTTTTGCCTGAAGTGGGAGAAGTTGAACCTTTCAAAAACTATCTTTACCGATATACTACTCCCTATTCGGCTTCCAAAAGCACCAGCCCCCTCTGGTATGCAGTCAGGCGTGCCTCTGCTCATATCATTGTGCTATCAAGCTATTCTCCATTTGTGAAGTACACGCCTCAATACATATGGCTTAAAGAAGAGCTGGCGCGGGTTGATAGAAAGAAGACACCTTGGCTCATTGTGCTCGTGCACAAGCCACTCTACAGCAGCAACGTAGCTCACTACATGGAGGGTGAAGCCATGCGATCAGTTTTTGAGACATGGTTCGTCCAATACAAAGTTGATGTCATCTTTGCCGGCCATGTCCATGCTTATGAAAGATCATATCGATACTCCAATATAGACTACAACATAACTGGCGGTAGAAGGTATCCCATACCTGACAAATCAGCACCTATTTACATAACAATCGGAGATGGAGGAAATCTAGAAGGTCTTGCCTCAAGTTATTTGGATCCACAGCCAGAATATTCTGCATTCAGAGAAGCGAGCTATGGACACGCCACACTGGAGATAAAAAACAGGACCCATGCTATCTACCACTGGTATCGCAATGATGACGGAAAGAAAGTCCCAGCTGACTCTCTCGTATTGCATAACCAGTATTGGGGAAGCAATGGAAGAAAACAGAATGAGGTTATTGATGAAGTTGTCAATGTTAAATGA

Predicted protein sequences of Glyma.13g161900

Limit To All Plant Sequences

>Glyma.13g161900.1.p sequence-type=predicted peptide transcript=Glyma.13g161900.1 locus=Glyma.13g161900 ID=Glyma.13g161900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFQYSKAMLLNLVLVSFVLLSSIRDGSAGITSSFVRPQWPGVDIPVDHEVFAVPKGYNAPQQVHITQGDYDGKAVIVSWVTPDEPGTRHVQYGTSKDKFKTSAEGTVANYTFYNYKSGYIHHCLIEGLEYKTKYYYRIGSGDSARDFWFETPPKVGPDTPYKFGIIGDLGQTFNSLSTLEHYLESGGEAVLYVGDLSYSDEHDYKDMGLRWDTWGRFAERSAAYQPWMWNVGNHEVEFLPEVGEVEPFKNYLYRYTTPYSASKSTSPLWYAVRRASAHIIVLSSYSPFVKYTPQYIWLKEELARVDRKKTPWLIVLVHKPLYSSNVAHYMEGEAMRSVFETWFVQYKVDVIFAGHVHAYERSYRYSNIDYNITGGRRYPIPDKSAPIYITIGDGGNLEGLASSYLDPQPEYSAFREASYGHATLEIKNRTHAIYHWYRNDDGKKVPADSLVLHNQYWGSNGRKQNEVIDEVVNVK*

>Glyma.13g161900.2.p sequence-type=predicted peptide transcript=Glyma.13g161900.2 locus=Glyma.13g161900 ID=Glyma.13g161900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFQYSKAMLLNLVLVSFVLLSSIRDGSAGITSSFVRPQWPGVDIPVDHEVFAVPKGYNAPQQVHITQGDYDGKAVIVSWVTPDEPGTRHVQYGTSKDKFKTSAEGTVANYTFYNYKSGYIHHCLIEGLEYKTKYYYRIGSGDSARDFWFETPPKVGPDTPYKFGIIGDLGQTFNSLSTLEHYLESGGEAVLYVGDLSYSDEHDYKDMGLRWDTWGRFAERSAAYQPWMWNVGNHEVEFLPEVGEVEPFKNYLYRYTTPYSASKSTSPLWYAVRRASAHIIVLSSYSPFVKYTPQYIWLKEELARVDRKKTPWLIVLVHKPLYSSNVAHYMEGEAMRSVFETWFVQYKVDVIFAGHVHAYERSYRYSNIDYNITGGRRYPIPDKSAPIYITIGDGGNLEGLASSYLDPQPEYSAFREASYGHATLEIKNRTHAIYHWYRNDDGKKVPADSLVLHNQYW*

>Glyma.13g161900.3.p sequence-type=predicted peptide transcript=Glyma.13g161900.3 locus=Glyma.13g161900 ID=Glyma.13g161900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLLNLVLVSFVLLSSIRDGSAGITSSFVRPQWPGVDIPVDHEVFAVPKGYNAPQQVHITQGDYDGKAVIVSWVTPDEPGTRHVQYGTSKDKFKTSAEGTVANYTFYNYKSGYIHHCLIEGLEYKTKYYYRIGSGDSARDFWFETPPKVGPDTPYKFGIIGDLGQTFNSLSTLEHYLESGGEAVLYVGDLSYSDEHDYKDMGLRWDTWGRFAERSAAYQPWMWNVGNHEVEFLPEVGEVEPFKNYLYRYTTPYSASKSTSPLWYAVRRASAHIIVLSSYSPFVKYTPQYIWLKEELARVDRKKTPWLIVLVHKPLYSSNVAHYMEGEAMRSVFETWFVQYKVDVIFAGHVHAYERSYRYSNIDYNITGGRRYPIPDKSAPIYITIGDGGNLEGLASSYLDPQPEYSAFREASYGHATLEIKNRTHAIYHWYRNDDGKKVPADSLVLHNQYWGSNGRKQNEVIDEVVNVK*

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