Glyma.13g154600

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Report for Sequence Feature Glyma.13g154600

Feature Type:	gene_model
Chromosome:	Gm13
Start:	27007329
stop:	27011304
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.13g154600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G11470.1	AT	4'-phosphopantetheinyl transferase superfamily	JGI	N/A	IEA
GO:0009059	GO-bp	macromolecule biosynthetic process	JGI	N/A	IEA
GO:0019878	GO-bp	lysine biosynthetic process via aminoadipic acid	EnsemblGenomes	N/A	IEA
GO:0000287	GO-mf	magnesium ion binding	EnsemblGenomes	N/A	IEA
GO:0000287	GO-mf	magnesium ion binding	JGI	N/A	IEA
GO:0008897	GO-mf	holo-[acyl-carrier-protein] synthase activity	EnsemblGenomes	N/A	IEA
GO:0008897	GO-mf	holo-[acyl-carrier-protein] synthase activity	JGI	N/A	IEA
KOG0945	KOG	Alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase	JGI	N/A	IEA
PTHR12215	Panther	PHOSPHOPANTETHEINE TRANSFERASE	JGI	N/A	IEA
PTHR12215:SF3	Panther		JGI	N/A	IEA
PF01648	PFAM	4'-phosphopantetheinyl transferase superfamily	JGI	N/A	IEA
PWY-6012	SoyCyc9	acyl carrier protein metabolism	Plant Metabolic Network		ISS
GN7V-58680	SoyCyc9-rxn	holo-[acyl-carrier-protein] synthase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.13g154600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.13g154600 not represented in the dataset	Glyma.13g154600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.13g154600

Paralog	Evidence	Comments
Glyma.10g074300	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.13g154600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma13g22230	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.13g154600

Limit To All Plant Sequences

>Glyma.13g154600.2 sequence-type=transcript locus=Glyma.13g154600 ID=Glyma.13g154600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CAAGTGAACATGAAACTATGAGGGGAAGGCGGAAAGAAAGATCCCATGGGGACCTTCAAATTAAATTGACCCTATCAACTAACCCATTACTAAATGATCCCTCAATTTTGTATTTGTAATTGACAGAAAGGGGACATCTCCATCGCTTACGAAAATCAACTTCATTCGCAACTTCTCCCACCAATTGGTCTCAAGCTCCTATCTCCTTTTGCTTCAATTCAAATCATATGCTAAGTCCCCCCTTCCTGTGACGCGTACTCACAACAGGAATCTAGTCACTACTGCTGCATCCTATTTACCTCCTGTTCAACTCCCAACACAAAGGGAAGTGCATTTTTGGTATATTTTACCTGATGAGGTAAAGAGCACAACCCTATTGAACCGATATTTAGAAATTCTATCACCTTGTGAGAAAGAAAATATATTTCGCATGCGTGGGGAACAACTGAGAAAAGGAGCACTCCTGGCCCGTGCATTGGTTCGCACTACATTGGCAAGATATCAGACGAATTTTCAAATTGATCCAAAATCCTTAAAGTTTATGAAGAACAATTATGGCAAGCCTGAGTTGGACTGGCAATATGCTGATGATTGGAGCCTACCGCATCTGCATTTTAATATCTCACACACTTCTTCTTTGATAGCTTGTGGAGTGACTGTGGGTTCACCTATTGGTATTGATGTGGAAGAGAAACAAAGGAGGTTAAAGAATGATATTTTAGCCTTTGCACAACGATTCTTTTCTCCCCATGAAATAGAAATGCTGACTCACATTGCAGACCCTGAACTTCGGCTTCAGGAGTTTATTAAATTATGGACTCTGAAGGAGTCTTATGTGAAAGCAATAGGGAGGGGCTTCTCAGCCTCACCTTTTAAGACTTTCACTATTCGATTAAGAGACCACCATGTGAAAGGAGACATCCATGCTCCACCTCTTATAACTTCTAAGGCACCTGATATTACTGTTGTTGAGGCTTCTGATGACGTGAAGAATCCGTCGAACAATTGGCAGTTTGTGCTTCTTGAGTTAGCTGGTTCTCACTACGCTGCCATTTGTATAGAACAGAACAGCGTCAATACAGGAAATGGACGTATTCCAATAAACCTGACCCTAAGGAAAACAATACCATACGTGGAGGATGAATGTATTTCTGCAACAGACAGTGCTGTAGTGATTGGTGGCTTGACTAGACTGTCAGATTAGTGATTCTGTGATGAAATGGAAATTTCGGCCTTCTTTTAGCGTTTTGGAACAAATGGTTCCAATCTATTTTAATGCTTCATTTGTGTTCTTGTTGCCTAGAATTCGTCCTCTTGAGGTGTGCTGCCATATTGCACACCCGATTTCGTGGTCTCTACTTTTAGTTGTGTAACTCTAGTCAACAAAGTTGCATATTGCAATCCATGACAAATTTATTTATTTATATATGGAAATGTATGAAAATTGATATTGATATGACAAATTTATTTATTTTACCGTAGGCAGCTGA

>Glyma.13g154600.3 sequence-type=transcript locus=Glyma.13g154600 ID=Glyma.13g154600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CAAGTGAACATGAAACTATGAGGGGAAGGCGGAAAGAAAGATCCCATGGGGACCTTCAAATTAAATTGACCCTATCAACTAACCCATTACTAAATGATCCCTCAATTTTGTATTTGTAATTGACAGAAAGGGGACATCTCCATCGCTTACGAAAATCAACTTCATTCGCAACTTCTCCCACCAATTGGTCTCAAGCTCCTATCTCCTTTTGCTTCAATTCAAATCATATGCTAAGTCCCCCCTTCCTGTGACGCGTACTCACAACAGGTTTGCTTTGTCCTGTGCATGATTTCTTTGCGAGACAAAGCACGGCTGATGATGAATATATATTGCTTTGGAAGGAATCTAGTCACTACTGCTGCATCCTATTTACCTCCTGTTCAACTCCCAACACAAAGGGAAGTGCATTTTTGGTATATTTTACCTGATGAGGTAAAGAGCACAACCCTATTGAACCGATATTTAGAAATTCTATCACCTTGTGAGAAAGAAAATATATTTCGCATGCGTGGGGAACAACTGAGAAAAGGAGCACTCCTGGCCCGTGCATTGGTTCGCACTACATTGGCAAGATATCAGACGAATTTTCAAATTGATCCAAAATCCTTAAAGTTTATGAAGAACAATTATGGCAAGCCTGAGTTGGACTGGCAATATGCTGATGATTGGAGCCTACCGCATCTGCATTTTAATATCTCACACACTTCTTCTTTGATAGCTTGTGGAGTGACTGTGGGTTCACCTATTGGTATTGATGTGGAAGAGAAACAAAGGAGGTTAAAGAATGATATTTTAGCCTTTGCACAACGATTCTTTTCTCCCCATGAAATAGAAATGCTGACTCACATTGCAGACCCTGAACTTCGGCTTCAGGAGTTTATTAAATTATGGACTCTGAAGGAGTCTTATGTGAAAGCAATAGGGAGGGGCTTCTCAGCCTCACCTTTTAAGACTTTCACTATTCGATTAAGAGACCACCATGTGAAAGGAGACATCCATGCTCCACCTCTTATAACTTCTAAGGCACCTGATATTACTGTTGTTGAGGCTTCTGATGACGTGAAGAATCCGTCGAACAATTGGCAGTTTGTGCTTCTTGAGTTAGCTGGTTCTCACTACGCTGCCATTTGTATAGAACAGAACAGCGTCAATACAGGAAATGGACGTATTCCAATAAACCTGACCCTAAGGAAAACAATACCATACGTGGAGGATGAATGTATTTCTGCAACAGACAGTGCTGTAGTGATTGGTGGCTTGACTAGACTGTCAGATTAGTGATTCTGTGATGAAATGGAAATTTCGGCCTTCTTTTAGCGTTTTGGAACAAATGGTTCCAATCTATTTTAATGCTTCATTTGTGTTCTTGTTGCCTAGAATTCGTCCTCTTGAGGTGTGCTGCCATATTGCACACCCGATTTCGTGGTCTCTACTTTTAGTTGTGTAACTCTAGTCAACAAAGTTGCATATTGCAATCCATGACAAATTTATTTATTTATATATGGAAATGTATGAAAATTGATATTGATATGACAAATTTATTTATTTTACCGTAGGCAGCTGA

Coding sequences of Glyma.13g154600

Limit To All Plant Sequences

>Glyma.13g154600.1 sequence-type=CDS polypeptide=Glyma.13g154600.1.p locus=Glyma.13g154600 ID=Glyma.13g154600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATTTCTTTGCGAGACAAAGCACGGCTGATGATGAATATATATTGCTTTGGAAGGAATCTAGTCACTACTGCTGCATCCTATTTACCTCCTGTTCAACTCCCAACACAAAGGGAAGTGCATTTTTGGTATATTTTACCTGATGAGGTAAAGAGCACAACCCTATTGAACCGATATTTAGAAATTCTATCACCTTGTGAGAAAGAAAATATATTTCGCATGCGTGGGGAACAACTGAGAAAAGGAGCACTCCTGGCCCGTGCATTGGTTCGCACTACATTGGCAAGATATCAGACGAATTTTCAAATTGATCCAAAATCCTTAAAGTTTATGAAGAACAATTATGGCAAGCCTGAGTTGGACTGGCAATATGCTGATGATTGGAGCCTACCGCATCTGCATTTTAATATCTCACACACTTCTTCTTTGATAGCTTGTGGAGTGACTGTGGGTTCACCTATTGGTATTGATGTGGAAGAGAAACAAAGGAGGTTAAAGAATGATATTTTAGCCTTTGCACAACGATTCTTTTCTCCCCATGAAATAGAAATGCTGACTCACATTGCAGACCCTGAACTTCGGCTTCAGGAGTTTATTAAATTATGGACTCTGAAGGAGTCTTATGTGAAAGCAATAGGGAGGGGCTTCTCAGCCTCACCTTTTAAGACTTTCACTATTCGATTAAGAGACCACCATGTGAAAGGAGACATCCATGCTCCACCTCTTATAACTTCTAAGGCACCTGATATTACTGTTGTTGAGGCTTCTGATGACGTGAAGAATCCGTCGAACAATTGGCAGTTTGTGCTTCTTGAGTTAGCTGGTTCTCACTACGCTGCCATTTGTATAGAACAGAACAGCGTCAATACAGGAAATGGACGTATTCCAATAAACCTGACCCTAAGGAAAACAATACCATACGTGGAGGATGAATGTATTTCTGCAACAGACAGTGCTGTAGTGATTGGTGGCTTGACTAGACTGTCAGATTAG

>Glyma.13g154600.2 sequence-type=CDS polypeptide=Glyma.13g154600.2.p locus=Glyma.13g154600 ID=Glyma.13g154600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCGTGGGGAACAACTGAGAAAAGGAGCACTCCTGGCCCGTGCATTGGTTCGCACTACATTGGCAAGATATCAGACGAATTTTCAAATTGATCCAAAATCCTTAAAGTTTATGAAGAACAATTATGGCAAGCCTGAGTTGGACTGGCAATATGCTGATGATTGGAGCCTACCGCATCTGCATTTTAATATCTCACACACTTCTTCTTTGATAGCTTGTGGAGTGACTGTGGGTTCACCTATTGGTATTGATGTGGAAGAGAAACAAAGGAGGTTAAAGAATGATATTTTAGCCTTTGCACAACGATTCTTTTCTCCCCATGAAATAGAAATGCTGACTCACATTGCAGACCCTGAACTTCGGCTTCAGGAGTTTATTAAATTATGGACTCTGAAGGAGTCTTATGTGAAAGCAATAGGGAGGGGCTTCTCAGCCTCACCTTTTAAGACTTTCACTATTCGATTAAGAGACCACCATGTGAAAGGAGACATCCATGCTCCACCTCTTATAACTTCTAAGGCACCTGATATTACTGTTGTTGAGGCTTCTGATGACGTGAAGAATCCGTCGAACAATTGGCAGTTTGTGCTTCTTGAGTTAGCTGGTTCTCACTACGCTGCCATTTGTATAGAACAGAACAGCGTCAATACAGGAAATGGACGTATTCCAATAAACCTGACCCTAAGGAAAACAATACCATACGTGGAGGATGAATGTATTTCTGCAACAGACAGTGCTGTAGTGATTGGTGGCTTGACTAGACTGTCAGATTAG

>Glyma.13g154600.3 sequence-type=CDS polypeptide=Glyma.13g154600.3.p locus=Glyma.13g154600 ID=Glyma.13g154600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATTTCTTTGCGAGACAAAGCACGGCTGATGATGAATATATATTGCTTTGGAAGGAATCTAGTCACTACTGCTGCATCCTATTTACCTCCTGTTCAACTCCCAACACAAAGGGAAGTGCATTTTTGGTATATTTTACCTGATGAGGTAAAGAGCACAACCCTATTGAACCGATATTTAGAAATTCTATCACCTTGTGAGAAAGAAAATATATTTCGCATGCGTGGGGAACAACTGAGAAAAGGAGCACTCCTGGCCCGTGCATTGGTTCGCACTACATTGGCAAGATATCAGACGAATTTTCAAATTGATCCAAAATCCTTAAAGTTTATGAAGAACAATTATGGCAAGCCTGAGTTGGACTGGCAATATGCTGATGATTGGAGCCTACCGCATCTGCATTTTAATATCTCACACACTTCTTCTTTGATAGCTTGTGGAGTGACTGTGGGTTCACCTATTGGTATTGATGTGGAAGAGAAACAAAGGAGGTTAAAGAATGATATTTTAGCCTTTGCACAACGATTCTTTTCTCCCCATGAAATAGAAATGCTGACTCACATTGCAGACCCTGAACTTCGGCTTCAGGAGTTTATTAAATTATGGACTCTGAAGGAGTCTTATGTGAAAGCAATAGGGAGGGGCTTCTCAGCCTCACCTTTTAAGACTTTCACTATTCGATTAAGAGACCACCATGTGAAAGGAGACATCCATGCTCCACCTCTTATAACTTCTAAGGCACCTGATATTACTGTTGTTGAGGCTTCTGATGACGTGAAGAATCCGTCGAACAATTGGCAGTTTGTGCTTCTTGAGTTAGCTGGTTCTCACTACGCTGCCATTTGTATAGAACAGAACAGCGTCAATACAGGAAATGGACGTATTCCAATAAACCTGACCCTAAGGAAAACAATACCATACGTGGAGGATGAATGTATTTCTGCAACAGACAGTGCTGTAGTGATTGGTGGCTTGACTAGACTGTCAGATTAG

Predicted protein sequences of Glyma.13g154600

Limit To All Plant Sequences

>Glyma.13g154600.1.p sequence-type=predicted peptide transcript=Glyma.13g154600.1 locus=Glyma.13g154600 ID=Glyma.13g154600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MISLRDKARLMMNIYCFGRNLVTTAASYLPPVQLPTQREVHFWYILPDEVKSTTLLNRYLEILSPCEKENIFRMRGEQLRKGALLARALVRTTLARYQTNFQIDPKSLKFMKNNYGKPELDWQYADDWSLPHLHFNISHTSSLIACGVTVGSPIGIDVEEKQRRLKNDILAFAQRFFSPHEIEMLTHIADPELRLQEFIKLWTLKESYVKAIGRGFSASPFKTFTIRLRDHHVKGDIHAPPLITSKAPDITVVEASDDVKNPSNNWQFVLLELAGSHYAAICIEQNSVNTGNGRIPINLTLRKTIPYVEDECISATDSAVVIGGLTRLSD*

>Glyma.13g154600.2.p sequence-type=predicted peptide transcript=Glyma.13g154600.2 locus=Glyma.13g154600 ID=Glyma.13g154600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRGEQLRKGALLARALVRTTLARYQTNFQIDPKSLKFMKNNYGKPELDWQYADDWSLPHLHFNISHTSSLIACGVTVGSPIGIDVEEKQRRLKNDILAFAQRFFSPHEIEMLTHIADPELRLQEFIKLWTLKESYVKAIGRGFSASPFKTFTIRLRDHHVKGDIHAPPLITSKAPDITVVEASDDVKNPSNNWQFVLLELAGSHYAAICIEQNSVNTGNGRIPINLTLRKTIPYVEDECISATDSAVVIGGLTRLSD*

>Glyma.13g154600.3.p sequence-type=predicted peptide transcript=Glyma.13g154600.3 locus=Glyma.13g154600 ID=Glyma.13g154600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MISLRDKARLMMNIYCFGRNLVTTAASYLPPVQLPTQREVHFWYILPDEVKSTTLLNRYLEILSPCEKENIFRMRGEQLRKGALLARALVRTTLARYQTNFQIDPKSLKFMKNNYGKPELDWQYADDWSLPHLHFNISHTSSLIACGVTVGSPIGIDVEEKQRRLKNDILAFAQRFFSPHEIEMLTHIADPELRLQEFIKLWTLKESYVKAIGRGFSASPFKTFTIRLRDHHVKGDIHAPPLITSKAPDITVVEASDDVKNPSNNWQFVLLELAGSHYAAICIEQNSVNTGNGRIPINLTLRKTIPYVEDECISATDSAVVIGGLTRLSD*

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