Glyma.13g153300

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Report for Sequence Feature Glyma.13g153300

Feature Type:	gene_model
Chromosome:	Gm13
Start:	26837992
stop:	26844939
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.13g153300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G36250.1	AT	Tubulin/FtsZ family protein	JGI	N/A	IEA
GO:0010020	GO-bp	chloroplast fission	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0009507	GO-cc	chloroplast	EnsemblGenomes	N/A	IEA
GO:0000166	GO-mf	nucleotide binding	EnsemblGenomes	N/A	IEA
GO:0003924	GO-mf	GTPase activity	EnsemblGenomes	N/A	IEA
GO:0005525	GO-mf	GTP binding	EnsemblGenomes	N/A	IEA
PF00091	PFAM	Tubulin/FtsZ family, GTPase domain	JGI	N/A	IEA
PF12327	PFAM	FtsZ family, C-terminal domain	JGI	N/A	IEA

Expression Patterns of Glyma.13g153300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.13g153300 not represented in the dataset	Glyma.13g153300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.13g153300

Paralog	Evidence	Comments
Glyma.10g071800	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.13g153300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma13g22070	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.13g153300

Limit To All Plant Sequences

>Glyma.13g153300.2 sequence-type=transcript locus=Glyma.13g153300 ID=Glyma.13g153300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CCACTCTCTTCTTCATTACAATTTTATGCATTTGCTCTTATCTTCAAAACATCGCACTGAGCTTGCACATTGTTGGTTTTATGATTCCAAGAACAGGTATTCGAAGAAAGAATTCTGGGTGAATTGAAAGTTTGGATCTTTTAAGCCTTTAAATTTCCTCTATACATTTACCTACATATCCCAACTTTGAAGTTTGGATACAGTAATAATCAAAATGGCCACTTGTGTGTCAACAATTTTTGCACCATCTAATACTAGAAATTCCGCAAGGGTGCTTTCTGTTGGAGGAACAAATCTCACTTGGAATTATCCTGGGAGAGCTTGTTTTACGAAAATGTATGACCGCAGGAATGGGTTTTCTGGTGGCATCCAGATGTCGGGTTTACTTCAAGTTAAGTGTTCAGCCAATTCGCACAGTGTAAGTCCATATAATAATAGCCAAGGTCCTTTTCTAGATTTACATCCTGAGGTGTCAATGCTTAGAGGAGAAGCGAGCAGTACAGTGAACAGCCCTAGAAAGGATAGCTCAGGTGGGGATTTATCTGAGAGCCTGGGAACTACATCTAGTCAAAGTGATTACAATGAAGCAAAGATCAAAGTTATTGGTGTTGGAGGTGGTGGGTCAAATGCAGTCAATCGCATGATAGAGAGCGAAATGCATGGCGTGGAGTTTTGGATTGTTAATACTGATGTTCAAGCCATGAGAATGTCACCTGTCTATCCTGAGAACCGTTTGCAAATTGGTCAAGAGCTTACACGAGGTCTTGGTGCTGGTGGTAACCCTGAGACTGGAATGAATGCTGCGAAAGAAAGCAAAGAATCAATAGAAGAGGCAGTCTATGGAGCCGATATGGTCTTTGTTACTGCTGGAATGGGTGGGGGAACTGGCACAGGTGGTGCTCCAATTATTGCTAGTATTGCAAAGTCAATGGGTATACTGACGGTTGGTATTGTCACCACCCCCTTCTCGTTTGAAGGGAGAAAGAGAGCTATTCAAGCCCAAGAAGGAATTACAGCCTTAAGAGATAATGTTGACACACTTATAGTTATTCCAAATGACAAGCTACTAACAGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACAGGGTGTTCGTGGCATATCTGATATTATTACGATACCAGGGTTGGTGAATGTAGATTTTGCTGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCACTAATGGGGATAGGAACTGCAACTGggaaatcaagggcaagagatgctgcattaaatgccatccagtcacctttactggatattggtatagagagggctactggaattgtttggaacataactggtgggactgatctgaccttgtttgagGTAAACACGGCAGCAGAGGTTATATATGACCTCGTGGACCCTACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCAGTGGTCAAGTGAGCATAACATTGATTGCAACTGGGTTCAAGCGTCAAGAGGAGAGCCAAGGGAGGCCTCTGCAGGTCAGTCAACTCACTCAAGCGGATACAACCTATGGCACCAACCGGCGGTCTTCCTCTTTCGCTGATGGTGGTTTGTTTGAGATACCAGAATTCCTAAAGAAGAAAGGAGGAGGTTCACGCTATCCAAGGGCGTAATACTCTTCATCCTAATTTCTTTGATCCCTTGCATTTCTTCACCTTTGGATATACATAGCATTGGTCTAGTTCTTAGGTCCCTGTCTTGCCCTTTTTTGGATTTTAGTCAGAGTAGTGAATACAGTTTGTTCATGAAAGTTGATTACTTTCCACTGTCCAGTCTTGTGCGCCTAACTGGAGGTATTGCAGCATGGATGCTTTTCTTGGCATATTTGAATAAGTTTGTTAGCTTGTACAGAGAATATTTCAGTAATGCTGAGAGCTTGTTATAGAA

Coding sequences of Glyma.13g153300

Limit To All Plant Sequences

>Glyma.13g153300.1 sequence-type=CDS polypeptide=Glyma.13g153300.1.p locus=Glyma.13g153300 ID=Glyma.13g153300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCACTTGTGTGTCAACAATTTTTGCACCATCTAATACTAGAAATTCCGCAAGGGTGCTTTCTGTTGGAGGAACAAATCTCACTTGGAATTATCCTGGGAGAGCTTGTTTTACGAAAATGTATGACCGCAGGAATGGGTTTTCTGGTGGCATCCAGATGTCGGGTTTACTTCAAGTTAAGTGTTCAGCCAATTCGCACAGTGTAAGTCCATATAATAATAGCCAAGGTCCTTTTCTAGATTTACATCCTGAGGTGTCAATGCTTAGAGGAGAAGCGAGCAGTACAGTGAACAGCCCTAGAAAGGATAGCTCAGGTGGGGATTTATCTGAGAGCCTGGGAACTACATCTAGTCAAAGTGATTACAATGAAGCAAAGATCAAAGTTATTGGTGTTGGAGGTGGTGGGTCAAATGCAGTCAATCGCATGATAGAGAGCGAAATGCATGGCGTGGAGTTTTGGATTGTTAATACTGATGTTCAAGCCATGAGAATGTCACCTGTCTATCCTGAGAACCGTTTGCAAATTGGTCAAGAGCTTACACGAGGTCTTGGTGCTGGTGGTAACCCTGAGACTGGAATGAATGCTGCGAAAGAAAGCAAAGAATCAATAGAAGAGGCAGTCTATGGAGCCGATATGGTCTTTGTTACTGCTGGAATGGGTGGGGGAACTGGCACAGGTGGTGCTCCAATTATTGCTAGTATTGCAAAGTCAATGGGTATACTGACGGTTGGTATTGTCACCACCCCCTTCTCGTTTGAAGGGAGAAAGAGAGCTATTCAAGCCCAAGAAGGAATTACAGCCTTAAGAGATAATGTTGACACACTTATAGTTATTCCAAATGACAAGCTACTAACAGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACAGGGTGTTCGTGGCATATCTGATATTATTACGATACCAGGGTTGGTGAATGTAGATTTTGCTGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCACTAATGGGGATAGGAACTGCAACTGGGAAATCAAGGGCAAGAGATGCTGCATTAAATGCCATCCAGTCACCTTTACTGGATATTGGTATAGAGAGGGCTACTGGAATTGTTTGGAACATAACTGGTGGGACTGATCTGACCTTGTTTGAGGTAAACACGGCAGCAGAGGTTATATATGACCTCGTGGACCCTACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCAGTGGTCAAGTGAGCATAACATTGATTGCAACTGGGTTCAAGCGTCAAGAGGAGAGCCAAGGGAGGCCTCTGCAGGTCAGTCAACTCACTCAAGCGGATACAACCTATGGCACCAACCGGCGGTCTTCCTCTTTCGCTGATGGTGGTTTGTTTGAGATACCAGAATTCCTAAAGAAGAAAGGAGGAGGTTCACGCTATCCAAGGGCGTAA

>Glyma.13g153300.2 sequence-type=CDS polypeptide=Glyma.13g153300.2.p locus=Glyma.13g153300 ID=Glyma.13g153300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCACTTGTGTGTCAACAATTTTTGCACCATCTAATACTAGAAATTCCGCAAGGGTGCTTTCTGTTGGAGGAACAAATCTCACTTGGAATTATCCTGGGAGAGCTTGTTTTACGAAAATGTATGACCGCAGGAATGGGTTTTCTGGTGGCATCCAGATGTCGGGTTTACTTCAAGTTAAGTGTTCAGCCAATTCGCACAGTGTAAGTCCATATAATAATAGCCAAGGTCCTTTTCTAGATTTACATCCTGAGGTGTCAATGCTTAGAGGAGAAGCGAGCAGTACAGTGAACAGCCCTAGAAAGGATAGCTCAGGTGGGGATTTATCTGAGAGCCTGGGAACTACATCTAGTCAAAGTGATTACAATGAAGCAAAGATCAAAGTTATTGGTGTTGGAGGTGGTGGGTCAAATGCAGTCAATCGCATGATAGAGAGCGAAATGCATGGCGTGGAGTTTTGGATTGTTAATACTGATGTTCAAGCCATGAGAATGTCACCTGTCTATCCTGAGAACCGTTTGCAAATTGGTCAAGAGCTTACACGAGGTCTTGGTGCTGGTGGTAACCCTGAGACTGGAATGAATGCTGCGAAAGAAAGCAAAGAATCAATAGAAGAGGCAGTCTATGGAGCCGATATGGTCTTTGTTACTGCTGGAATGGGTGGGGGAACTGGCACAGGTGGTGCTCCAATTATTGCTAGTATTGCAAAGTCAATGGGTATACTGACGGTTGGTATTGTCACCACCCCCTTCTCGTTTGAAGGGAGAAAGAGAGCTATTCAAGCCCAAGAAGGAATTACAGCCTTAAGAGATAATGTTGACACACTTATAGTTATTCCAAATGACAAGCTACTAACAGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACAGGGTGTTCGTGGCATATCTGATATTATTACGATACCAGGGTTGGTGAATGTAGATTTTGCTGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCACTAATGGGGATAGGAACTGCAACTGGGAAATCAAGGGCAAGAGATGCTGCATTAAATGCCATCCAGTCACCTTTACTGGATATTGGTATAGAGAGGGCTACTGGAATTGTTTGGAACATAACTGGTGGGACTGATCTGACCTTGTTTGAGGTAAACACGGCAGCAGAGGTTATATATGACCTCGTGGACCCTACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCAGTGGTCAAGTGAGCATAACATTGATTGCAACTGGGTTCAAGCGTCAAGAGGAGAGCCAAGGGAGGCCTCTGCAGGTCAGTCAACTCACTCAAGCGGATACAACCTATGGCACCAACCGGCGGTCTTCCTCTTTCGCTGATGGTGGTTTGTTTGAGATACCAGAATTCCTAAAGAAGAAAGGAGGAGGTTCACGCTATCCAAGGGCGTAA

Predicted protein sequences of Glyma.13g153300

Limit To All Plant Sequences

>Glyma.13g153300.1.p sequence-type=predicted peptide transcript=Glyma.13g153300.1 locus=Glyma.13g153300 ID=Glyma.13g153300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATCVSTIFAPSNTRNSARVLSVGGTNLTWNYPGRACFTKMYDRRNGFSGGIQMSGLLQVKCSANSHSVSPYNNSQGPFLDLHPEVSMLRGEASSTVNSPRKDSSGGDLSESLGTTSSQSDYNEAKIKVIGVGGGGSNAVNRMIESEMHGVEFWIVNTDVQAMRMSPVYPENRLQIGQELTRGLGAGGNPETGMNAAKESKESIEEAVYGADMVFVTAGMGGGTGTGGAPIIASIAKSMGILTVGIVTTPFSFEGRKRAIQAQEGITALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGTDLTLFEVNTAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESQGRPLQVSQLTQADTTYGTNRRSSSFADGGLFEIPEFLKKKGGGSRYPRA*

>Glyma.13g153300.2.p sequence-type=predicted peptide transcript=Glyma.13g153300.2 locus=Glyma.13g153300 ID=Glyma.13g153300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATCVSTIFAPSNTRNSARVLSVGGTNLTWNYPGRACFTKMYDRRNGFSGGIQMSGLLQVKCSANSHSVSPYNNSQGPFLDLHPEVSMLRGEASSTVNSPRKDSSGGDLSESLGTTSSQSDYNEAKIKVIGVGGGGSNAVNRMIESEMHGVEFWIVNTDVQAMRMSPVYPENRLQIGQELTRGLGAGGNPETGMNAAKESKESIEEAVYGADMVFVTAGMGGGTGTGGAPIIASIAKSMGILTVGIVTTPFSFEGRKRAIQAQEGITALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGTDLTLFEVNTAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESQGRPLQVSQLTQADTTYGTNRRSSSFADGGLFEIPEFLKKKGGGSRYPRA*

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