SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g147800

Feature Type:gene_model
Chromosome:Gm13
Start:25214508
stop:25216927
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g147800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G32700.1AT JGI N/AIEA
PTHR31065PantherFam PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN JGI N/AIEA
PTHR31065:SF4PantherFam GH24370 JGI N/AIEA
PF04640Pfam PLATZ transcription factor JGI N/AIEA

Gene model name correspondences to Glyma.13g147800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g21140 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g147800
>Glyma.13g147800.1 sequence-type=CDS polypeptide=Glyma.13g147800.1.p locus=Glyma.13g147800 id=Glyma.13g147800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGCACAATGTTGGTGCCTCCATGGCTTGAGCCACTCCTAAACACATCCTTCTTCGATGTGTGTCGGATTCACGGAGATGCCGCGAGGAGCGAATGTAACATGTTTTGTCTCGACTGCAATGAGAATGCGTTTTGCTTCTATTGCCGTTCCTCAAAACACAAGGATCACCAAGTTATTCAGATACGGAGATCTTCGTATCACGATGTAGTGAGGGTGGCGGAAATTCAGACAGTGTTGGACATTAGTGGAGTTCAAACATATGTGATCAACAGTGCCAGGGTTTTGTTTCTGAATGAGAGGCCTCAACCAAAGTCTGGAAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGGTGTAAGCTTGTAGGAATAAAGAGAAATGGGGATGCAAGTTTTGCTTTGGATGCTAAAAATGAGGCATCAACAATGGAGGGCATGTCAAGGAGATCGGTTTCTTCAAGACATCATCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGATATGTACCCGGCCACGCCTTCTCCACCTGCTTCTTCAAACGCAAGGAGAAGAAAAGGGATTCCTCATAGGGCACCTTTTGGCTCCTAA

>Glyma.13g147800.3 sequence-type=CDS polypeptide=Glyma.13g147800.3.p locus=Glyma.13g147800 id=Glyma.13g147800.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGGTGCCTCCATGGCTTGAGCCACTCCTAAACACATCCTTCTTCGATGTGTGTCGGATTCACGGAGATGCCGCGAGGAGCGAATGTAACATGTTTTGTCTCGACTGCAATGAGAATGCGTTTTGCTTCTATTGCCGTTCCTCAAAACACAAGGATCACCAAGTTATTCAGATACGGAGATCTTCGTATCACGATGTAGTGAGGGTGGCGGAAATTCAGACAGTGTTGGACATTAGTGGAGTTCAAACATATGTGATCAACAGTGCCAGGGTTTTGTTTCTGAATGAGAGGCCTCAACCAAAGTCTGGAAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGCTTCTGTTCTTTGGGGTGTAAGCTTGTAGGAATAAAGAGAAATGGGGATGCAAGTTTTGCTTTGGATGCTAAAAATGAGGCATCAACAATGGAGGGCATGTCAAGGAGATCGGTTTCTTCAAGACATCATCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGATATGTACCCGGCCACGCCTTCTCCACCTGCTTCTTCAAACGCAAGGAGAAGAAAAGGGATTCCTCATAGGGCACCTTTTGGCTCCTAA
Predicted protein sequences of Glyma.13g147800
>Glyma.13g147800.1.p sequence-type=predicted peptide transcript=Glyma.13g147800.1 locus=Glyma.13g147800 id=Glyma.13g147800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGTMLVPPWLEPLLNTSFFDVCRIHGDAARSECNMFCLDCNENAFCFYCRSSKHKDHQVIQIRRSSYHDVVRVAEIQTVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGDASFALDAKNEASTMEGMSRRSVSSRHHQEEELREGSQQDMYPATPSPPASSNARRRKGIPHRAPFGS*

>Glyma.13g147800.3.p sequence-type=predicted peptide transcript=Glyma.13g147800.3 locus=Glyma.13g147800 id=Glyma.13g147800.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLVPPWLEPLLNTSFFDVCRIHGDAARSECNMFCLDCNENAFCFYCRSSKHKDHQVIQIRRSSYHDVVRVAEIQTVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRNGDASFALDAKNEASTMEGMSRRSVSSRHHQEEELREGSQQDMYPATPSPPASSNARRRKGIPHRAPFGS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo