SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g123000

Feature Type:gene_model
Chromosome:Gm13
Start:22648976
stop:22650623
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g123000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G23230.1AT JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
PTHR31190PantherFam DNA-BINDING DOMAIN JGI N/AIEA
PF00847Pfam AP2 domain JGI N/AIEA

Proteins Associated with Glyma.13g123000
LocusGene SymbolProtein Name
ERF102 Ethylene-responsive factor gene 102

Gene model name correspondences to Glyma.13g123000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g18400 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g123000
>Glyma.13g123000.1 sequence-type=CDS polypeptide=Glyma.13g123000.1.p locus=Glyma.13g123000 id=Glyma.13g123000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGGGTGGAAGATCATCTGCTTCAAATGGGAATTGTGAGGTTCGGTATAGAGGGATTAGAAGAAGGCCATGGGGCAAGTTTGCAGCAGAGATTCGTGACCCTACGAGAAAAGGGACAAGGATATGGCTTGGAACATTTGACACTGCGGAACAAGCTGCTCGAGCTTATGATGCTGCTGCTTTTCATTTTCGTGGTCATAGAGCAATTCTCAACTTCCCAAATGAGTACCAATCTCATAATCCAAACTCTTCTTTGCCTATGCCTCTAATTGTGCCTCCTCCTTCTTATTCTTCTTCTTTCACTTCTAATTATTCTGGTGATGATAATAACCACCTTGTGAGACCTGGAGAAATAATGCAAGGTGGTGATCTTGATGACACTTTTGAGTTGGAGTACTTGGATAATAAGTTGCTCGAGGAACTCCTTCAGATGCAAGATAACAGACACTTCTACAAGTGA
Predicted protein sequences of Glyma.13g123000
>Glyma.13g123000.1.p sequence-type=predicted peptide transcript=Glyma.13g123000.1 locus=Glyma.13g123000 id=Glyma.13g123000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEGGRSSASNGNCEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQSHNPNSSLPMPLIVPPPSYSSSFTSNYSGDDNNHLVRPGEIMQGGDLDDTFELEYLDNKLLEELLQMQDNRHFYK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo