Report for Sequence Feature Glyma.13g111100
Feature Type: gene_model
Chromosome: Gm13
Start: 22468371
stop: 22469170
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.13g111100
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G05910.1 AT
Protein of unknown function (DUF567)
JGI N/A IEA
PF04525 PFAM
Tubby C 2
JGI N/A IEA
Expression Patterns of Glyma.13g111100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.13g111100
Paralog Evidence Comments
Glyma.17g048500 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.13g111100 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma13g17090 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.13g111100
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.13g111100.1 sequence-type=CDS polypeptide=Glyma.13g111100.1.p locus=Glyma.13g111100 ID=Glyma.13g111100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTGAGGCCCTGAGCATTTACAAGAAGTGGAAAGGTTATAGCTTAGACTACGAAGGATCAAGGAAGCTGATTTTCAGCTTGAGAGAATCCAATTCTTGTTTTGTTAAGAACAATGCAATCAGAATCTTCACTAGGAACAGAGGCTGTGACTTTAAGATCAGTGGCTGTTTCCCGGATAAGTGTTGTAGCATTGTTGACTCCAAAGGCAACGAGGTAGCCCAGGTGAGGATGATGAAGGAAGTGGAGAAATTGATTGAAAGCAAGGATTTGTACCATGTAGTGGTGAATCCTGGGATGGATCAAGCTTTTGTCTTTGGAGTCATCGCTATCCTTGATTACATTTATGGCGAATCTACCCACTGCTAA
Predicted protein sequences of Glyma.13g111100
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.13g111100.1.p sequence-type=predicted peptide transcript=Glyma.13g111100.1 locus=Glyma.13g111100 ID=Glyma.13g111100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVEALSIYKKWKGYSLDYEGSRKLIFSLRESNSCFVKNNAIRIFTRNRGCDFKISGCFPDKCCSIVDSKGNEVAQVRMMKEVEKLIESKDLYHVVVNPGMDQAFVFGVIAILDYIYGESTHC*