SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g085100

Feature Type:gene_model
Chromosome:Gm13
Start:18687058
stop:18692732
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g085100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G77920.1AT JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0043565GO-mf sequence-specific DNA binding JGI N/AIEA
K14431KEGG Transcription factors JGI N/AIEA
PTHR22952PantherFam CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED JGI N/AIEA
PF00170Pfam bZIP transcription factor JGI N/AIEA
PF14144Pfam Seed dormancy control JGI N/AIEA

Proteins Associated with Glyma.13g085100
LocusGene SymbolProtein Name
BZIP83 bZIP transcription factor
bZIP109 Basic leucine zipper transcription factor-like protein gene 109

Gene model name correspondences to Glyma.13g085100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g02351 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g085100
>Glyma.13g085100.9 sequence-type=CDS polypeptide=Glyma.13g085100.9.p locus=Glyma.13g085100 id=Glyma.13g085100.9.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAACTCTTCATCAACTCAACTAGTCCTCACGAAAAGGATGGGTATATATGACCCATTCCATCAAGTGAACATGTGGGGGGACAGCTTTAAAATTGATGGAAGCTTGAACTCAATTGCTCCCCAAATGTTAATGATTAAGCCTAGCATGCAGAACAAGTCTGAATGTACTCCTCACGAATCAAGGGAACCTTCTGGAGATGATCAAGAGACTAATGAAAAAGCTGATACTAAGGCACTAAGACGTCAAGCTCAAAATCGCGAGGCTGCTCGGAAATGTCGGCTGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCCGTGTGAAGCTCATGCAATTGGAGTTGGAGATTGAGAAAGCAAGAAAGCAGCAGGGTATGTACATACGTAGTGCACTAGATGTCAGCTATATGGGATCATCCGGAACAATTAACCCAGGGATAACTTTGTTTGAACTTGAATATGCACAATGGATTGAAGAGCAAGATAGACAGAATCAAGAACTGAGAAATACATTACAAACTCAAGCATCTGAAATGCAGCTTCATCTACTTGTTGAGAGTTGCTTGAGCCACTACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGGCTGATGTCTTCTATTTAATCTCTGGTGCATGGAAAGCATCAGTGGAACGCCTTTTTCTTTGGATTGGAGGATCCCGTCCATCACAACTTCTAAATATCATTGCACCACAGCTTGAGCCTTTGACTGATCAACAAATTGTGAGCATTAACAACCTCCGGCTTTCATCTCAGCAAGCTGAAGATGCTCTTTCACTAGGATTGGACAAACTCCAGCAGAGTCTGGTCCACAACATACCATCAGATCCATTGGCTGTAGGACACTACGGGTTTGAGATAGCTGCTGCCATGGAAAAAGGTGAAGCACTAGAACGTTTTGTAAACCAGGCAGATCACCTTAGGCAACAAACTCTGATTCACATGTCTCGGATCCTGACAACTGCTCAAGCTGCTAAAGGCTTGCTGGCTATGGGAGAATACTTTCATCGTCTTCGCACCCTTAGTTCTTTATGGACTGCTCGTTCATGTGATCCTTCCTTTCCCACTCAACTCTCAAACTGA
Predicted protein sequences of Glyma.13g085100
>Glyma.13g085100.9.p sequence-type=predicted peptide transcript=Glyma.13g085100.9 locus=Glyma.13g085100 id=Glyma.13g085100.9.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNSSSTQLVLTKRMGIYDPFHQVNMWGDSFKIDGSLNSIAPQMLMIKPSMQNKSECTPHESREPSGDDQETNEKADTKALRRQAQNREAARKCRLRKKAYVQQLETSRVKLMQLELEIEKARKQQGMYIRSALDVSYMGSSGTINPGITLFELEYAQWIEEQDRQNQELRNTLQTQASEMQLHLLVESCLSHYSNLFRMKAEAAKADVFYLISGAWKASVERLFLWIGGSRPSQLLNIIAPQLEPLTDQQIVSINNLRLSSQQAEDALSLGLDKLQQSLVHNIPSDPLAVGHYGFEIAAAMEKGEALERFVNQADHLRQQTLIHMSRILTTAQAAKGLLAMGEYFHRLRTLSSLWTARSCDPSFPTQLSN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo