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Report for Sequence Feature Glyma.13g053300

Feature Type:gene_model
Chromosome:Gm13
Start:14133962
stop:14138723
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g053300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G60920.1AT COB JGI N/AIEA
GO:0010215GO-bp cellulose microfibril organization JGI N/AIEA
GO:0016049GO-bp cell growth JGI N/AIEA
GO:0031225GO-cc anchored component of membrane JGI N/AIEA
PTHR31673PantherFam PROTEIN COBRA JGI N/AIEA
PTHR31673:SF3PantherFam PROTEIN COBRA JGI N/AIEA
PF04833Pfam COBRA-like protein JGI N/AIEA

Proteins Associated with Glyma.13g053300
LocusGene SymbolProtein Name
COBL16 Regulates cell wall expansion and cellulose depostion

Gene model name correspondences to Glyma.13g053300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g06660 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g053300
>Glyma.13g053300.1 sequence-type=CDS polypeptide=Glyma.13g053300.1.p locus=Glyma.13g053300 id=Glyma.13g053300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTTTTCCGTTTCAGCTTCCCCTTCACGATCCGATTCTTCTTCATACCCCCTCCATGCATTCTGCTTTTCGTTCTCTTCTCTTTCACGTGCTTCAATTCCACAGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGCTGGACACCTGATGGCTATGTTGCTGTTGTTACAATGTACAACTTCCAACAATATCGTCATATCTCAGCGCCTGGGTGGTCATTAGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATATAAGGCAAACATCCCACATTGCTGTAAAAAGAACCCTATAGTTGTTGATTTACTTCCCGGAACACCTTACAACCAACAAATTTCAAACTGCTGCAAAGGTGGTGTACTCAGCTCGTGGGCACAGGACCAATCCAAGGCGGTTGCAGCATTTCAAGTCAGTGTAGGTAGTGCCAGTACCACTAACAAAACTGTCAAAGTGCCAAAAGATTTCACACTGAAAGCGCCAGGACCCGGTTACACGTGTGGGCCGGCAACAATTGTGAAACCAACTCAATTTTTACAACCAGACAAAAGGAGAGTGACCCAAGCACTCATGACATGGAATGTGACATGCACATATTCACAATTTCTTGCTCAGAGAACACCCAGTTGCTGTGTCTCGCTCTCATCTTTCTATAACAATACAGTTGTACCCTGCACTACATGTGCATGTGGCTGCCAGGGCAACTCATCTCAATCAGGAGAATGTGTAGATCCAGATTCACCACATTTGCAATCAGTTGTTTCCAACGCTGGACCTGGAAAGAGTAGTATCACACCTTTGGTTCGATGCACTCGTCATATGTGCCCAATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTGTTACTAATTTTAATTACGGGATGAATTATTCTGATTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAAGCAATAACTCCCTACGGGTCAATAAATGATACAGCAATGCTTTGGGGACTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGCCCTCTTGGTAATGTACAATCAGAGCTACTATTCAGAAAGGATAAATCAACCTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGCGACGTTTGTGTGATGTCGCCACCTGATGCTTATCCATGGTTACCTAATGCGGGTTCCAGGCAAGTGGTTTCCCTGCTTGCTTTGGTGATGTCCTCTTTGGTAGCCTTGGTATTATATGCAGATACTTAA
Predicted protein sequences of Glyma.13g053300
>Glyma.13g053300.1.p sequence-type=predicted peptide transcript=Glyma.13g053300.1 locus=Glyma.13g053300 id=Glyma.13g053300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLFRFSFPFTIRFFFIPPPCILLFVLFSFTCFNSTEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMYNFQQYRHISAPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKYKANIPHCCKKNPIVVDLLPGTPYNQQISNCCKGGVLSSWAQDQSKAVAAFQVSVGSASTTNKTVKVPKDFTLKAPGPGYTCGPATIVKPTQFLQPDKRRVTQALMTWNVTCTYSQFLAQRTPSCCVSLSSFYNNTVVPCTTCACGCQGNSSQSGECVDPDSPHLQSVVSNAGPGKSSITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYGMNYSDWNLVVQHPNFDNLTQLFSFNYKAITPYGSINDTAMLWGLKFYNDFLMQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDVCVMSPPDAYPWLPNAGSRQVVSLLALVMSSLVALVLYADT*






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