SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g053100

Feature Type:gene_model
Chromosome:Gm13
Start:14122279
stop:14129705
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g053100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G15810.1AT JGI N/AIEA
2.1.1.216EC tRNA (guanine26-N2)-dimethyltransferase JGI N/AIEA
GO:0008033GO-bp tRNA processing JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0004809GO-mf tRNA (guanine-N2-)-methyltransferase activity JGI N/AIEA
K00555KEGG Transfer RNA biogenesis JGI N/AIEA
PTHR10631PantherFam N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE JGI N/AIEA
PTHR10631:SF3PantherFam TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE JGI N/AIEA
PF02005Pfam N2,N2-dimethylguanosine tRNA methyltransferase JGI N/AIEA

Gene model name correspondences to Glyma.13g053100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g06680 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g053100
>Glyma.13g053100.1 sequence-type=CDS polypeptide=Glyma.13g053100.1.p locus=Glyma.13g053100 id=Glyma.13g053100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTTCAGATCTCAGTGATTATAAAATCATCAAGGAAGGAGAAGCTGAGATTCTTATGCACGCAAAGAATGAAGTCTTCTACAACAAAACTCAGGTCAATAACAGGGATATATCAATCGCTGTCTTGAGAACATTTATATCGAAACGGAAGCAAGAGCATGAGGCATATTTGTCCAAAAGAACAAAAGGGGCACAAAAGGCATCTGAAAATGGTGATTCTTCTGAATTGGTTAAGGAGGAAGTACCTGACACAACTGCACAAGAATATCATAAATCTAATGGGGAATGCGAAGTAGAGGAAGAGATATCTCCAGAAGAACGATGCAGCACCGTGGAAGAAGGTTCAGTTAAGGTCACTGAAGAATGCAGCACCGCAGAAGGGCACACCAATCTTTCAGAAGGAAAAGGAAAGAGGGAACTGAAGCCCCCAAGAGTTCTTGAGGCCTTGTCTGCTTCTGGGCTAAGGTCTCTCAGATATGCTCGTGAAGTAGAAGGAATTGGTCAGGTTATTGCTGTGGACAATGATAAAGCTTCTGTTGAAGCTTGTAGAAGGAACATCAAATTCAATGGTTCAGTTGCAGCTTCAAAAGTGGAGTCTCATCTTGATGATGCTCGTGTATATATGCTAACCCATCCTAAAGAATTTGATGTGGTTGATCTTGATCCTTATGGTTCACCTTCAGTGTTTCTGGATTCAGCAGTTCAATCTACTGTTGATGGAGGTATGCTGATGTGTACTGCAACAGACATGGCTGTGCTCTGTGGGGGAAATGGGGAGGTCTGCTATTCAAAATATGGATCATACCCATTGAGAGGGAAATATTGCCATGAAATGGCTTTGAGGATCGTGCTGGCTTGCATTGAGAGTCATGCTAATCGGTATAAGCGGTATATCGTTCCCGTGTTATCTGTTCAGATGGATTTTTATCTTCGTGTGTTTGTTCGCATATATACTTCTGCCAGTGCTATGAAAAACACTCCCCTAAAGCTTTCATATGTTTATCAGTGCACCGGTTGTGATTCTTTCCACCTACAGCCCATTGGGAGGACCATTTCCAAGAATACTAGCGTCAGATATTTGCCTGGCTTTGGTCCTGTTGTTCCTCAAGAATGCAGTGATTGTGGGAAAAAATTCAACATGGGTGGCCCTATATGGTCTGCTCCTATCCATGACCAAGAATGGGTGGCTGCTATTCTGGCTGATGTAAAATATATGAAAGACAGATATCCAGCTTATGATCGCATTTCAGCTGTGTTGACTACAATATCAGAGGAATTGCCTGATGTTCCCCTCTTTTTGAGTCTGCACAACCTCTGTGCAACCCTCAAATGCACTTCTCCGTCAGCAATTATTTTCCGTTCTGCGGTGATCAATGCAGGCTATCGTATATCTGGAACTCATGTTAATCCATTGGGGCTTAAATCAGATGCACCCATGGATGTTATTTGGGATATTATGCGTTGTTGGGTAAAAAATCATCCAGTGAAGCCTCAGCCAGCAGATCAACCAGGAAGTATTATACTTGCAAAGGAACCTGCTCTTCAGGCTAATTTTGCTCGAGCTGTAGCATCTCTTAGTAAGGCACAAGCAAAGAAGGTTGCTCGATTTCTTCCAAATCCTGAAAGACACTGGGGTCCAAAACTAAGGGCTGGACGTCAAATTACTAGCAAACATGTCTCTCTTTTGGGTCCTGACGCTATTAATGGAGCTCTCAATCAGGAAGACGATGAAGAACCTAAAAGTAAGAAGTCAAGGACTGAAGATAGTGTCACATCTTAG
Predicted protein sequences of Glyma.13g053100
>Glyma.13g053100.1.p sequence-type=predicted peptide transcript=Glyma.13g053100.1 locus=Glyma.13g053100 id=Glyma.13g053100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSDLSDYKIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVLRTFISKRKQEHEAYLSKRTKGAQKASENGDSSELVKEEVPDTTAQEYHKSNGECEVEEEISPEERCSTVEEGSVKVTEECSTAEGHTNLSEGKGKRELKPPRVLEALSASGLRSLRYAREVEGIGQVIAVDNDKASVEACRRNIKFNGSVAASKVESHLDDARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSTVDGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRIVLACIESHANRYKRYIVPVLSVQMDFYLRVFVRIYTSASAMKNTPLKLSYVYQCTGCDSFHLQPIGRTISKNTSVRYLPGFGPVVPQECSDCGKKFNMGGPIWSAPIHDQEWVAAILADVKYMKDRYPAYDRISAVLTTISEELPDVPLFLSLHNLCATLKCTSPSAIIFRSAVINAGYRISGTHVNPLGLKSDAPMDVIWDIMRCWVKNHPVKPQPADQPGSIILAKEPALQANFARAVASLSKAQAKKVARFLPNPERHWGPKLRAGRQITSKHVSLLGPDAINGALNQEDDEEPKSKKSRTEDSVTS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo