SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.13g053000

Feature Type:gene_model
Chromosome:Gm13
Start:14116364
stop:14119532
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g053000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G15650.1AT ATRGP2,RGP2 JGI N/AIEA
5.4.99.30EC UDP-arabinopyranose mutase JGI N/AIEA
GO:0030244GO-bp cellulose biosynthetic process JGI N/AIEA
GO:0016866GO-mf intramolecular transferase activity JGI N/AIEA
K13379KEGG Glycosyltransferases JGI N/AIEA
PTHR31682PantherFam UDP-ARABINOSE MUTASE JGI N/AIEA
PF03214Pfam Reversibly glycosylated polypeptide JGI N/AIEA

Gene model name correspondences to Glyma.13g053000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g06690 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g053000
>Glyma.13g053000.1 sequence-type=CDS polypeptide=Glyma.13g053000.1.p locus=Glyma.13g053000 id=Glyma.13g053000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGATGCTTCTGTGGCACCACCACCTCCACTGAAAGATGAGCTTGACATTGTGATCCCCACCATAAGGAACCTTGACTTTCTTGAGATGTGGAGGCCATTCTTTCAGCCTTACCATTTGATCATTGTTCAAGATGGTGACCCCACCAAAACCATCAAGGTTCCTCCTGGCTTTGACTATGAGCTCTACAACCGCAATGACATCAACAAGCTTTTGGGTCCAAGGGCCTCTTGCATCTCCTTCAAGGACTCCGCGTGTCGCTGCTTCGGCTACATGGTGTCCAAGAAGAAGTACATCTTCACCATTGATGATGACTGCTTTGTTGCCAATGATCCATCTGGAAAAGCGATCAATGCACTCGAGCAGCATATTAAAAACCTTTTGTGTCCATCCACTCCCTTGTTCTTCAATACCCTTTATGACCCCTTCAGAGAAGGTGCAGATTTTGTTCGTGGATACCCTTTCAGTCTTCGTGAAGGTGTGCCAACTGCTATCTCCCATGGACTTTGGCTCAACATCCCAGACTATGATGCTCCAACACAGCTTGTGAAGCCTCTCGAGAGAAACACTAGGTATGTGGACGCTGTTCTGACCATACCAAAGGGCACTTTATTCCCCATGTGTGGAATGAACTTGGCATTCGACCGTGATCTCATTGGACCAGCAATGTACTTTGGTCTCATGGGAGATGGTCAACCAATTGGACGCTACGATGATATGTGGGCTGGCTGGTGCTGCAAGGTGATCACTGATCATTTGGGGCTAGGAGTCAAGACTGGTCTGCCCTATATCTATCACAGCAAGGCCAGTAACCCATTTGTTAACCTGAGGAAAGAGTACAAAGGCATATTCTGGCAGGAAGACATCATTCCATTCTTCCAGAATGTTGTTCTTCCAAAAGAATGCACCACTGTTCAGAAGTGCTACATTGAGCTCTCCAAGCAAGTCAAGGAAAAGCTCTCAAAGATAGATCCTTACTTCGACAAGCTGGCTGATGCAATGGTCACTTGGATTGAAGCTTGGGATGAGCTTAACCCTGAAGGAGCATCTCAGGCCAATGGCAAAGCATAA
Predicted protein sequences of Glyma.13g053000
>Glyma.13g053000.1.p sequence-type=predicted peptide transcript=Glyma.13g053000.1 locus=Glyma.13g053000 id=Glyma.13g053000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADASVAPPPPLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIKVPPGFDYELYNRNDINKLLGPRASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVANDPSGKAINALEQHIKNLLCPSTPLFFNTLYDPFREGADFVRGYPFSLREGVPTAISHGLWLNIPDYDAPTQLVKPLERNTRYVDAVLTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCCKVITDHLGLGVKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQNVVLPKECTTVQKCYIELSKQVKEKLSKIDPYFDKLADAMVTWIEAWDELNPEGASQANGKA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo