Glyma.13g046600

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Report for Sequence Feature Glyma.13g046600

Feature Type:	gene_model
Chromosome:	Gm13
Start:	14105161
stop:	14115147
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.13g046600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G49190.1	AT	O-acyltransferase (WSD1-like) family protein	JGI	N/A	IEA
GO:0019432	GO-bp	triglyceride biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0045017	GO-bp	glycerolipid biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0045017	GO-bp	glycerolipid biosynthetic process	JGI	N/A	IEA
GO:0005886	GO-cc	plasma membrane	EnsemblGenomes	N/A	IEA
GO:0004144	GO-mf	diacylglycerol O-acyltransferase activity	EnsemblGenomes	N/A	IEA
GO:0004144	GO-mf	diacylglycerol O-acyltransferase activity	JGI	N/A	IEA
GO:0047196	GO-mf	long-chain-alcohol O-fatty-acyltransferase activity	EnsemblGenomes	N/A	IEA
PF03007	PFAM	Wax ester synthase-like Acyl-CoA acyltransferase domain	JGI	N/A	IEA
PF06974	PFAM	Protein of unknown function (DUF1298)	JGI	N/A	IEA
PWY-5884	SoyCyc9	wax esters biosynthesis I	Plant Metabolic Network		ISS
TRIGLSYN-PWY	SoyCyc9	diacylglycerol and triacylglycerol biosynthesis	Plant Metabolic Network		ISS
GN7V-52778	SoyCyc9-rxn	diacylglycerol O-acyltransferase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.13g046600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.13g046600 not represented in the dataset	Glyma.13g046600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.13g046600

Paralog	Evidence	Comments
Glyma.19g046000	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.13g046600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma13g07550	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.13g046600

Limit To All Plant Sequences

>Glyma.13g046600.2 sequence-type=transcript locus=Glyma.13g046600 ID=Glyma.13g046600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTCTCTCTCACAGTCTCTCTTCCCATTGTATATATCTGGCCCCAACTCAAGAAACTGAATCTCAACAACAAAACTTATTGTCACACTCCAACCTAGCTAGCTTTTTTCTTCTTGCTTGTTATAAGTGAAAGGATGGAAAGATTTGATGGAGAAGAAATTGAAGAGCCAGTGAGTCCAACAGGGCAATACTTGACAAGCTCTTCACTGAGTGTGTACATTCTTGGTGTCTTGGAAACTGAGGTTCCCATCGATGACTCTCAAACCGTGCCACTGCTTCAGAATCTCTTCCTTCCCATCAACTCACGTTTCTCGTCCATCATGATTAGGGACAAAAATGGGGAGAAAAAGTGGGAAAAAGTTGAAGTTAAGCTGGAGGACCATATCAAAGTTCCTACATTTCCCAATGGCAAGTCATCCAACTTCTTATATGATGAATACCTTGATGAGTACCTGTCCACAATAGCTGTGGAACATTTGCCACATAATAGGCCACTATGGGAACTTCACATTATTAAATACCCAACAAACAATGCTAAGGGTACCTTGGTGTTCAAACTCCACCATGCCCTTGGGGATGGCTTCTCTCTCATGGGTGCCCTTCTTTCATGCATGCAAAGAGCTGACAACACCTCTCTTCCCTTCACACTCCCATCAAGCCTAAGACCCAAAGCATCAATTTCCAACACCAAAGGGGTTTTCAAGAAATTGCCCTCCATTTTCTTCCAAACCATATCCGAATTTGGATGGAGTTTCTTGAAAAGTAACATGATTGAAGATGATCAAACACCAATAAGGTCTTGTGCGGAAGACTTCAAGACTCGCCAAATTACCATCTCAGATGTCACCTTCTCCTTGGATCTTATCAAAGAAGTGAAATCCAAACTTGGAGTGAGCATAAATGATGTGCTTGCCGGGGTAATTTTTTTTGGCATTCGGCTATACATGCAAGAAATTAATCTGAAATCGAGCCAAACCCAATCCACAGCACTGGTGTTGCTGAACACAAGAAATATTGAAGGTTACAAGTCTGTTAAGGAGATGATTAACAAGACCAATAGTCGTTCTTCATGGGGGAATCAATATGCCTTTTTGCATGTTCCAATTCCAGAGCTTAGTGATTCCAAATATGCAAACCCACTTGAGTTTATAAGGGAAGCCCATATGGATATGACCAAAAAGAAAAATTCTTTGGCCACTCCTCTCACTGGCATGCTTCTAGATATGCTCAGAAAACTCAGAGGTCCTGAGGCTGCAGCTAGATACCTGCGCAATACTTTAAGAAACTCAAGCACAACAATCTCAAACATCATTGGACCAGTGGAGCAAATGGCTGTGGCTAATCATCCAATTAAAGGGTTTTACTTCATGGTAGCTGGTTCACCTGAGgttgatgcagcgaatatggggtcccagaccttacacgtcggatttgaggtgtgtctttgataggaggggggacctgcaaaacaaaagactctgatactcaaAGTCTCACCATGACGATCATGAGCTACATGGGAAAGATAAGAATTGCATTTGGAGTAGAGAAGGACTTCATCGACAAGCAATTATTCAAGTCGTGTTTGGAGAATTCTCTTGAGATGATAAAGGAAGCAGCAAAAAAGATTTCGACATAAAACTAATCAAATATGGAAGATAAGTACTACCATTATATTCTATTGTTAACATATAATTATTTTATTTAAATATATGTGATGTAATGATTCTGTAATAGAATTTTGTTTGTGTGTGAAACGTATTTTTATTGAACTTGAACAGTATCATCACAGACATGTTTGTTTTTAGTTGGCAAGTCCCTACCATACATAAAAAAGTAAAATGTTTTTTTTTT

>Glyma.13g046600.3 sequence-type=transcript locus=Glyma.13g046600 ID=Glyma.13g046600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTCTCTCTCACAGTCTCTCTTCCCATTGTATATATCTGGCCCCAACTCAAGAAACTGAATCTCAACAACAAAACTTATTGTCACACTCCAACCTAGCTAGCTTTTTTCTTCTTGCTTGTTATAAGTGAAAGGATGGAAAGATTTGATGGAGAAGAAATTGAAGAGCCAGTGAGTCCAACAGGGCAATACTTGACAAGCTCTTCACTGAGTGTGTACATTCTTGGTGTCTTGGAAACTGAGGTTCCCATCGATGACTCTCAAACCGTGCCACTGCTTCAGAATCTCTTCCTTCCCATCAACTCACGTTTCTCGTCCATCATGATTAGGGACAAAAATGGGGAGAAAAAGTGGGAAAAAGTTGAAGTTAAGCTGGAGGACCATATCAAAGTTCCTACATTTCCCAATGGCAAGTCATCCAACTTCTTATATGATGAATACCTTGATGAGTACCTGTCCACAATAGCTGTGGAACATTTGCCACATAATAGGCCACTATGGGAACTTCACATTATTAAATACCCAACAAACAATGCTAAGGGTACCTTGGTGTTCAAACTCCACCATGCCCTTGGGGATGGCTTCTCTCTCATGGGTGCCCTTCTTTCATGCATGCAAAGAGCTGACAACACCTCTCTTCCCTTCACACTCCCATCAAGCCTAAGACCCAAAGCATCAATTTCCAACACCAAAGGGGTTTTCAAGAAATTGCCCTCCATTTTCTTCCAAACCATATCCGAATTTGGATGGAGTTTCTTGAAAAGTAACATGATTGAAGATGATCAAACACCAATAAGGTCTTGTGCGGAAGACTTCAAGACTCGCCAAATTACCATCTCAGATGTCACCTTCTCCTTGGATCTTATCAAAGAAGTGAAATCCAAACTTGGAGTGAGCATAAATGATGTGCTTGCCGGGGTAATTTTTTTTGGCATTCGGCTATACATGCAAGAAATTAATCTGAAATCGAGCCAAACCCAATCCACAGCACTGGTGTTGCTGAACACAAGAAATATTGAAGGTTACAAGTCTGTTAAGGAGATGATTAACAAGACCAATAGTCGTTCTTCATGGGGGAATCAATATGCCTTTTTGCATGTTCCAATTCCAGAGCTTAGTGATTCCAAATATGCAAACCCACTTGAGTTTATAAGGGAAGCCCATATGGATATGACCAAAAAGAAAAATTCTTTGGCCACTCCTCTCACTGGCATGCTTCTAGATATGCTCAGAAAACTCAGAGGTCCTGAGGCTGCAGCTAGATACCTGCGCAATACTTTAAGAAACTCAAGCACAACAATCTCAAACATCATTGGACCAGTGGAGCAAATGGCTGTGGCTAATCATCCAATTAAAGGGTTTTACTTCATGGTAGCTGGTTCACCTGAGagataacctatttgttggggagtccagctgttaagaatcaggtgtccatgctcctataacagggtagtcacatgtctctgagtgtcatgtaagatgccacatgtattttgtgggtcctgtacaatacacaTCTATTAGTTATATTTGGTTTTTCGTTTGGGGAGTTTCAAATCCAGAGTAGAGAGAAAATTTGTTTTGGTGGTATGTTTGATTATCTTTAAAAGTACCTTTATACATAAAAAAAATTTGGCTAAAAAACTCAGTTTTATAGAAGCAGAACTTGGATTACTTTTGCAATTTGCAAACTTTAATTCAAATATACGCTGCATCATAGAAAGAAACTAGTAGTATTGAAGTTAAATAGACAAATAAAAAATTATTTATATATAACACTTCTTTTTTGTACTCGCTAAT

Coding sequences of Glyma.13g046600

Limit To All Plant Sequences

>Glyma.13g046600.1 sequence-type=CDS polypeptide=Glyma.13g046600.1.p locus=Glyma.13g046600 ID=Glyma.13g046600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAGATTTGATGGAGAAGAAATTGAAGAGCCAGTGAGTCCAACAGGGCAATACTTGACAAGCTCTTCACTGAGTGTGTACATTCTTGGTGTCTTGGAAACTGAGGTTCCCATCGATGACTCTCAAACCGTGCCACTGCTTCAGAATCTCTTCCTTCCCATCAACTCACGTTTCTCGTCCATCATGATTAGGGACAAAAATGGGGAGAAAAAGTGGGAAAAAGTTGAAGTTAAGCTGGAGGACCATATCAAAGTTCCTACATTTCCCAATGGCAAGTCATCCAACTTCTTATATGATGAATACCTTGATGAGTACCTGTCCACAATAGCTGTGGAACATTTGCCACATAATAGGCCACTATGGGAACTTCACATTATTAAATACCCAACAAACAATGCTAAGGGTACCTTGGTGTTCAAACTCCACCATGCCCTTGGGGATGGCTTCTCTCTCATGGGTGCCCTTCTTTCATGCATGCAAAGAGCTGACAACACCTCTCTTCCCTTCACACTCCCATCAAGCCTAAGACCCAAAGCATCAATTTCCAACACCAAAGGGGTTTTCAAGAAATTGCCCTCCATTTTCTTCCAAACCATATCCGAATTTGGATGGAGTTTCTTGAAAAGTAACATGATTGAAGATGATCAAACACCAATAAGGTCTTGTGCGGAAGACTTCAAGACTCGCCAAATTACCATCTCAGATGTCACCTTCTCCTTGGATCTTATCAAAGAAGTGAAATCCAAACTTGGAGTGAGCATAAATGATGTGCTTGCCGGGGTAATTTTTTTTGGCATTCGGCTATACATGCAAGAAATTAATCTGAAATCGAGCCAAACCCAATCCACAGCACTGGTGTTGCTGAACACAAGAAATATTGAAGGTTACAAGTCTGTTAAGGAGATGATTAACAAGACCAATAGTCGTTCTTCATGGGGGAATCAATATGCCTTTTTGCATGTTCCAATTCCAGAGCTTAGTGATTCCAAATATGCAAACCCACTTGAGTTTATAAGGGAAGCCCATATGGATATGACCAAAAAGAAAAATTCTTTGGCCACTCCTCTCACTGGCATGCTTCTAGATATGCTCAGAAAACTCAGAGGTCCTGAGGCTGCAGCTAGATACCTGCGCAATACTTTAAGAAACTCAAGCACAACAATCTCAAACATCATTGGACCAGTGGAGCAAATGGCTGTGGCTAATCATCCAATTAAAGGGTTTTACTTCATGGTAGCTGGTTCACCTGAGAGTCTCACCATGACGATCATGAGCTACATGGGAAAGATAAGAATTGCATTTGGAGTAGAGAAGGACTTCATCGACAAGCAATTATTCAAGTCGTGTTTGGAGAATTCTCTTGAGATGATAAAGGAAGCAGCAAAAAAGATTTCGACATAA

>Glyma.13g046600.2 sequence-type=CDS polypeptide=Glyma.13g046600.2.p locus=Glyma.13g046600 ID=Glyma.13g046600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAGATTTGATGGAGAAGAAATTGAAGAGCCAGTGAGTCCAACAGGGCAATACTTGACAAGCTCTTCACTGAGTGTGTACATTCTTGGTGTCTTGGAAACTGAGGTTCCCATCGATGACTCTCAAACCGTGCCACTGCTTCAGAATCTCTTCCTTCCCATCAACTCACGTTTCTCGTCCATCATGATTAGGGACAAAAATGGGGAGAAAAAGTGGGAAAAAGTTGAAGTTAAGCTGGAGGACCATATCAAAGTTCCTACATTTCCCAATGGCAAGTCATCCAACTTCTTATATGATGAATACCTTGATGAGTACCTGTCCACAATAGCTGTGGAACATTTGCCACATAATAGGCCACTATGGGAACTTCACATTATTAAATACCCAACAAACAATGCTAAGGGTACCTTGGTGTTCAAACTCCACCATGCCCTTGGGGATGGCTTCTCTCTCATGGGTGCCCTTCTTTCATGCATGCAAAGAGCTGACAACACCTCTCTTCCCTTCACACTCCCATCAAGCCTAAGACCCAAAGCATCAATTTCCAACACCAAAGGGGTTTTCAAGAAATTGCCCTCCATTTTCTTCCAAACCATATCCGAATTTGGATGGAGTTTCTTGAAAAGTAACATGATTGAAGATGATCAAACACCAATAAGGTCTTGTGCGGAAGACTTCAAGACTCGCCAAATTACCATCTCAGATGTCACCTTCTCCTTGGATCTTATCAAAGAAGTGAAATCCAAACTTGGAGTGAGCATAAATGATGTGCTTGCCGGGGTAATTTTTTTTGGCATTCGGCTATACATGCAAGAAATTAATCTGAAATCGAGCCAAACCCAATCCACAGCACTGGTGTTGCTGAACACAAGAAATATTGAAGGTTACAAGTCTGTTAAGGAGATGATTAACAAGACCAATAGTCGTTCTTCATGGGGGAATCAATATGCCTTTTTGCATGTTCCAATTCCAGAGCTTAGTGATTCCAAATATGCAAACCCACTTGAGTTTATAAGGGAAGCCCATATGGATATGACCAAAAAGAAAAATTCTTTGGCCACTCCTCTCACTGGCATGCTTCTAGATATGCTCAGAAAACTCAGAGGTCCTGAGGCTGCAGCTAGATACCTGCGCAATACTTTAAGAAACTCAAGCACAACAATCTCAAACATCATTGGACCAGTGGAGCAAATGGCTGTGGCTAATCATCCAATTAAAGGGTTTTACTTCATGGTAGCTGGTTCACCTGAGGTTGATGCAGCGAATATGGGGTCCCAGACCTTACACGTCGGATTTGAGGTGTGTCTTTGA

>Glyma.13g046600.3 sequence-type=CDS polypeptide=Glyma.13g046600.3.p locus=Glyma.13g046600 ID=Glyma.13g046600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAGATTTGATGGAGAAGAAATTGAAGAGCCAGTGAGTCCAACAGGGCAATACTTGACAAGCTCTTCACTGAGTGTGTACATTCTTGGTGTCTTGGAAACTGAGGTTCCCATCGATGACTCTCAAACCGTGCCACTGCTTCAGAATCTCTTCCTTCCCATCAACTCACGTTTCTCGTCCATCATGATTAGGGACAAAAATGGGGAGAAAAAGTGGGAAAAAGTTGAAGTTAAGCTGGAGGACCATATCAAAGTTCCTACATTTCCCAATGGCAAGTCATCCAACTTCTTATATGATGAATACCTTGATGAGTACCTGTCCACAATAGCTGTGGAACATTTGCCACATAATAGGCCACTATGGGAACTTCACATTATTAAATACCCAACAAACAATGCTAAGGGTACCTTGGTGTTCAAACTCCACCATGCCCTTGGGGATGGCTTCTCTCTCATGGGTGCCCTTCTTTCATGCATGCAAAGAGCTGACAACACCTCTCTTCCCTTCACACTCCCATCAAGCCTAAGACCCAAAGCATCAATTTCCAACACCAAAGGGGTTTTCAAGAAATTGCCCTCCATTTTCTTCCAAACCATATCCGAATTTGGATGGAGTTTCTTGAAAAGTAACATGATTGAAGATGATCAAACACCAATAAGGTCTTGTGCGGAAGACTTCAAGACTCGCCAAATTACCATCTCAGATGTCACCTTCTCCTTGGATCTTATCAAAGAAGTGAAATCCAAACTTGGAGTGAGCATAAATGATGTGCTTGCCGGGGTAATTTTTTTTGGCATTCGGCTATACATGCAAGAAATTAATCTGAAATCGAGCCAAACCCAATCCACAGCACTGGTGTTGCTGAACACAAGAAATATTGAAGGTTACAAGTCTGTTAAGGAGATGATTAACAAGACCAATAGTCGTTCTTCATGGGGGAATCAATATGCCTTTTTGCATGTTCCAATTCCAGAGCTTAGTGATTCCAAATATGCAAACCCACTTGAGTTTATAAGGGAAGCCCATATGGATATGACCAAAAAGAAAAATTCTTTGGCCACTCCTCTCACTGGCATGCTTCTAGATATGCTCAGAAAACTCAGAGGTCCTGAGGCTGCAGCTAGATACCTGCGCAATACTTTAAGAAACTCAAGCACAACAATCTCAAACATCATTGGACCAGTGGAGCAAATGGCTGTGGCTAATCATCCAATTAAAGGGTTTTACTTCATGGTAGCTGGTTCACCTGAGAGATAA

Predicted protein sequences of Glyma.13g046600

Limit To All Plant Sequences

>Glyma.13g046600.1.p sequence-type=predicted peptide transcript=Glyma.13g046600.1 locus=Glyma.13g046600 ID=Glyma.13g046600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERFDGEEIEEPVSPTGQYLTSSSLSVYILGVLETEVPIDDSQTVPLLQNLFLPINSRFSSIMIRDKNGEKKWEKVEVKLEDHIKVPTFPNGKSSNFLYDEYLDEYLSTIAVEHLPHNRPLWELHIIKYPTNNAKGTLVFKLHHALGDGFSLMGALLSCMQRADNTSLPFTLPSSLRPKASISNTKGVFKKLPSIFFQTISEFGWSFLKSNMIEDDQTPIRSCAEDFKTRQITISDVTFSLDLIKEVKSKLGVSINDVLAGVIFFGIRLYMQEINLKSSQTQSTALVLLNTRNIEGYKSVKEMINKTNSRSSWGNQYAFLHVPIPELSDSKYANPLEFIREAHMDMTKKKNSLATPLTGMLLDMLRKLRGPEAAARYLRNTLRNSSTTISNIIGPVEQMAVANHPIKGFYFMVAGSPESLTMTIMSYMGKIRIAFGVEKDFIDKQLFKSCLENSLEMIKEAAKKIST*

>Glyma.13g046600.2.p sequence-type=predicted peptide transcript=Glyma.13g046600.2 locus=Glyma.13g046600 ID=Glyma.13g046600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERFDGEEIEEPVSPTGQYLTSSSLSVYILGVLETEVPIDDSQTVPLLQNLFLPINSRFSSIMIRDKNGEKKWEKVEVKLEDHIKVPTFPNGKSSNFLYDEYLDEYLSTIAVEHLPHNRPLWELHIIKYPTNNAKGTLVFKLHHALGDGFSLMGALLSCMQRADNTSLPFTLPSSLRPKASISNTKGVFKKLPSIFFQTISEFGWSFLKSNMIEDDQTPIRSCAEDFKTRQITISDVTFSLDLIKEVKSKLGVSINDVLAGVIFFGIRLYMQEINLKSSQTQSTALVLLNTRNIEGYKSVKEMINKTNSRSSWGNQYAFLHVPIPELSDSKYANPLEFIREAHMDMTKKKNSLATPLTGMLLDMLRKLRGPEAAARYLRNTLRNSSTTISNIIGPVEQMAVANHPIKGFYFMVAGSPEVDAANMGSQTLHVGFEVCL*

>Glyma.13g046600.3.p sequence-type=predicted peptide transcript=Glyma.13g046600.3 locus=Glyma.13g046600 ID=Glyma.13g046600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERFDGEEIEEPVSPTGQYLTSSSLSVYILGVLETEVPIDDSQTVPLLQNLFLPINSRFSSIMIRDKNGEKKWEKVEVKLEDHIKVPTFPNGKSSNFLYDEYLDEYLSTIAVEHLPHNRPLWELHIIKYPTNNAKGTLVFKLHHALGDGFSLMGALLSCMQRADNTSLPFTLPSSLRPKASISNTKGVFKKLPSIFFQTISEFGWSFLKSNMIEDDQTPIRSCAEDFKTRQITISDVTFSLDLIKEVKSKLGVSINDVLAGVIFFGIRLYMQEINLKSSQTQSTALVLLNTRNIEGYKSVKEMINKTNSRSSWGNQYAFLHVPIPELSDSKYANPLEFIREAHMDMTKKKNSLATPLTGMLLDMLRKLRGPEAAARYLRNTLRNSSTTISNIIGPVEQMAVANHPIKGFYFMVAGSPER*

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