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Report for Sequence Feature Glyma.13g040600

Feature Type:gene_model
Chromosome:Gm13
Start:12931343
stop:12943367
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.13g040600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53310.1AT myosin heavy chain-related JGI N/AIEA
GO:0016459GO-cc myosin complex EnsemblGenomesN/AIEA
GO:0016459GO-cc myosin complex JGI N/AIEA
GO:0003774GO-mf motor activity EnsemblGenomesN/AIEA
GO:0003774GO-mf motor activity JGI N/AIEA
PF06017PFAM Myosin tail JGI N/AIEA

Expression Patterns of Glyma.13g040600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.13g040600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g08460 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.13g040600
>Glyma.13g040600.2 sequence-type=transcript locus=Glyma.13g040600 ID=Glyma.13g040600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTACAATTTTATTACTCCAACCACAAGGCAAGCACATAAGCACAATCATCGATATCTTCAACTTCATCGCACCTGGTGGGGTCCACCTCCACCACCAGCACATGCTCCTACCTCTCTTTTTCCAATTCGAACAGGACCTTCTTTAATCGCCACCCATTCGATACCACCCTCTCCCTCCGGTTCCGATTCAACGGTTCTAGAAGATGCCTCGGCGGGTCCAGATCGAAGATCCCAAATACGACGACGTTCCTGACGCCGACGAACCGGAGGAAACGATCCGTTTCAAATCCTCCAACAGCAACGTCTCCGACGACCAAGAACCCTTCATGGGCATCAAGGTTCGCCGAAAAGCCTCTCTCCACAGAGACCACAAAGGAGACTACCTCAACGTCCCTTCCCACCCTTTCCTAATCAAAATTCTACAGAAACAAGGGGACAATGAGGTTCTGTTTGCGGACAGGGTTCTGAAGTTTACGGGCTCCGGGAAGATGAAACGCTGCGTTCTGATGATCACGGATTCTGCGATTTACATCGTTGACCCTGAGGTGGACGCGCTGAAGCGGAGAATAGTGCTTGCGGCGGTGGAGAGGGTTTGTCTGAGTGAACTGAGTGATAATTTTTTCGCGGTGATTGTTCCGTCGGAGTATGATTTGCTCATGGCTAGTACTCGGAAGACGGAGATTGTCACGGTGCTGGTCGAGGCTACCAAGGCCAAGAGTGCGACGGGGTTCGAACTCGATGTCGTTTTCTCCAATAGATTTGAGTATAACGCGGCATCTGACTTGGTGAAGGAAGTTCAATTTGAGGAAGTTGAAGGTATGTGACAAATTTTATTTTCTCCCTCCCCACTTTTTGACAGGCATATATAGGTGGTGATTATAATCAATGCCACCATTCCATCCAATCCATTTTTATATTTCTTTGTTATAGGGTTCTTTCTGCCTCATTCGTTTTAAGGTTCATTTATTTCTTACTAAATTTCAGGGGGTGTCAAAACAAGAATTTTGAGGAAGTGAATTATGGTCCAAAATTTTGATGAACTTGTCTGTAAACTATGTAAGAGATACAGAGTCTGATTTTTGAGTGGTATTATGGAATGTGTTCTTCTGGCAACAGGTTTTCCACTCAAAAATGACTTTGTTTATAATTATGATGTCAGAAATTTTAAGAGAAAAAGAAAGATATGTCTGATATATGTTTAACTTGAAAATTGAAAAGAGATTCATATGTACTGGACTTGTTGAATGTGATTATATCAGTTTCTCGGATGAAAATATGAACATTTTTGTTATTTTTCA

>Glyma.13g040600.3 sequence-type=transcript locus=Glyma.13g040600 ID=Glyma.13g040600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTTACAATTTTATTACTCCAACCACAAGGCAAGCACATAAGCACAATCATCGATATCTTCAACTTCATCGCACCTGGTGGGGTCCACCTCCACCACCAGCACATGCTCCTACCTCTCTTTTTCCAATTCGAACAGGACCTTCTTTAATCGCCACCCATTCGATACCACCCTCTCCCTCCGGTTCCGATTCAACGGTTCTAGAAGATGCCTCGGCGGGTCCAGATCGAAGATCCCAAATACGACGACGTTCCTGACGCCGACGAACCGGAGGAAACGATCCGTTTCAAATCCTCCAACAGCAACGTCTCCGACGACCAAGAACCCTTCATGGGCATCAAGGTTCGCCGAAAAGCCTCTCTCCACAGAGACCACAAAGGAGACTACCTCAACGTCCCTTCCCACCCTTTCCTAATCAAAATTCTACAGAAACAAGGGGACAATGAGGTTCTGTTTGCGGACAGGGTTCTGAAGTTTACGGGCTCCGGGAAGATGAAACGCTGCGTTCTGATGATCACGGATTCTGCGATTTACATCGTTGACCCTGAGGTGGACGCGCTGAAGCGGAGAATAGTGCTTGCGGCGGTGGAGAGGGTTTGTCTGAGTGAACTGAGTGATAATTTTTTCGCGGTGATTGTTCCGTCGGAGTATGATTTGCTCATGGCTAGTACTCGGAAGACGGAGATTGTCACGGTGCTGGTCGAGGCTACCAAGGCCAAGAGTGCGACGGGGTTCGAACTCGATGTCGTTTTCTCCAATAGATTTGAGTATAACGCGGCATCTGACTTGGTGAAGGAAGTTCAATTTGAGGAAGTTGAAGGGGGTGTCAAAACAAGAATTTTGAGGAAGTGAATTATGGTCCAAAATTTTGATGAACTTGTCTGTAAACTATGTAAGAGATACAGAGTCTGATTTTTGAGTGGTATTATGGAATGTGTTCTTCTGGCAACAGGTTTTCCACTCAAAAATGACTTTGTTTATAATTATGATGTCAGAAATTTTAAGAGAAAAAGAAAGATATGTCTGATATATGTTTAACTTGAAAATTGAAAAGAGATTCATATGTACTGGACTTGTTGAATGTGATTATATCAGTTTCTCGGATGAAAATATGAACATTTTTGTTATTTTTCA
Coding sequences of Glyma.13g040600
>Glyma.13g040600.1 sequence-type=CDS polypeptide=Glyma.13g040600.1.p locus=Glyma.13g040600 ID=Glyma.13g040600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCTCGGCGGGTCCAGATCGAAGATCCCAAATACGACGACGTTCCTGACGCCGACGAACCGGAGGAAACGATCCGTTTCAAATCCTCCAACAGCAACGTCTCCGACGACCAAGAACCCTTCATGGGCATCAAGGTTCGCCGAAAAGCCTCTCTCCACAGAGACCACAAAGGAGACTACCTCAACGTCCCTTCCCACCCTTTCCTAATCAAAATTCTACAGAAACAAGGGGACAATGAGGTTCTGTTTGCGGACAGGGTTCTGAAGTTTACGGGCTCCGGGAAGATGAAACGCTGCGTTCTGATGATCACGGATTCTGCGATTTACATCGTTGACCCTGAGGTGGACGCGCTGAAGCGGAGAATAGTGCTTGCGGCGGTGGAGAGGGTTTGTCTGAGTGAACTGAGTGATAATTTTTTCGCGGTGATTGTTCCGTCGGAGTATGATTTGCTCATGGCTAGTACTCGGAAGACGGAGATTGTCACGGTGCTGGTCGAGGCTACCAAGGCCAAGAGTGCGACGGGGTTCGAACTCGATGTCGTTTTCTCCAATAGATTTGAGTATAACGCGGCATCTGACTTGGTGAAGGAAGTTCAATTTGAGGAAGTTGAAGGCCGATCCAGCTTTACCACAACAGTTTTGTGCAATAACGATCTGCAGTTATAG

>Glyma.13g040600.2 sequence-type=CDS polypeptide=Glyma.13g040600.2.p locus=Glyma.13g040600 ID=Glyma.13g040600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCTCGGCGGGTCCAGATCGAAGATCCCAAATACGACGACGTTCCTGACGCCGACGAACCGGAGGAAACGATCCGTTTCAAATCCTCCAACAGCAACGTCTCCGACGACCAAGAACCCTTCATGGGCATCAAGGTTCGCCGAAAAGCCTCTCTCCACAGAGACCACAAAGGAGACTACCTCAACGTCCCTTCCCACCCTTTCCTAATCAAAATTCTACAGAAACAAGGGGACAATGAGGTTCTGTTTGCGGACAGGGTTCTGAAGTTTACGGGCTCCGGGAAGATGAAACGCTGCGTTCTGATGATCACGGATTCTGCGATTTACATCGTTGACCCTGAGGTGGACGCGCTGAAGCGGAGAATAGTGCTTGCGGCGGTGGAGAGGGTTTGTCTGAGTGAACTGAGTGATAATTTTTTCGCGGTGATTGTTCCGTCGGAGTATGATTTGCTCATGGCTAGTACTCGGAAGACGGAGATTGTCACGGTGCTGGTCGAGGCTACCAAGGCCAAGAGTGCGACGGGGTTCGAACTCGATGTCGTTTTCTCCAATAGATTTGAGTATAACGCGGCATCTGACTTGGTGAAGGAAGTTCAATTTGAGGAAGTTGAAGGTATGTGA

>Glyma.13g040600.3 sequence-type=CDS polypeptide=Glyma.13g040600.3.p locus=Glyma.13g040600 ID=Glyma.13g040600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCTCGGCGGGTCCAGATCGAAGATCCCAAATACGACGACGTTCCTGACGCCGACGAACCGGAGGAAACGATCCGTTTCAAATCCTCCAACAGCAACGTCTCCGACGACCAAGAACCCTTCATGGGCATCAAGGTTCGCCGAAAAGCCTCTCTCCACAGAGACCACAAAGGAGACTACCTCAACGTCCCTTCCCACCCTTTCCTAATCAAAATTCTACAGAAACAAGGGGACAATGAGGTTCTGTTTGCGGACAGGGTTCTGAAGTTTACGGGCTCCGGGAAGATGAAACGCTGCGTTCTGATGATCACGGATTCTGCGATTTACATCGTTGACCCTGAGGTGGACGCGCTGAAGCGGAGAATAGTGCTTGCGGCGGTGGAGAGGGTTTGTCTGAGTGAACTGAGTGATAATTTTTTCGCGGTGATTGTTCCGTCGGAGTATGATTTGCTCATGGCTAGTACTCGGAAGACGGAGATTGTCACGGTGCTGGTCGAGGCTACCAAGGCCAAGAGTGCGACGGGGTTCGAACTCGATGTCGTTTTCTCCAATAGATTTGAGTATAACGCGGCATCTGACTTGGTGAAGGAAGTTCAATTTGAGGAAGTTGAAGGGGGTGTCAAAACAAGAATTTTGAGGAAGTGA
Predicted protein sequences of Glyma.13g040600
>Glyma.13g040600.1.p sequence-type=predicted peptide transcript=Glyma.13g040600.1 locus=Glyma.13g040600 ID=Glyma.13g040600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPRRVQIEDPKYDDVPDADEPEETIRFKSSNSNVSDDQEPFMGIKVRRKASLHRDHKGDYLNVPSHPFLIKILQKQGDNEVLFADRVLKFTGSGKMKRCVLMITDSAIYIVDPEVDALKRRIVLAAVERVCLSELSDNFFAVIVPSEYDLLMASTRKTEIVTVLVEATKAKSATGFELDVVFSNRFEYNAASDLVKEVQFEEVEGRSSFTTTVLCNNDLQL*

>Glyma.13g040600.2.p sequence-type=predicted peptide transcript=Glyma.13g040600.2 locus=Glyma.13g040600 ID=Glyma.13g040600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPRRVQIEDPKYDDVPDADEPEETIRFKSSNSNVSDDQEPFMGIKVRRKASLHRDHKGDYLNVPSHPFLIKILQKQGDNEVLFADRVLKFTGSGKMKRCVLMITDSAIYIVDPEVDALKRRIVLAAVERVCLSELSDNFFAVIVPSEYDLLMASTRKTEIVTVLVEATKAKSATGFELDVVFSNRFEYNAASDLVKEVQFEEVEGM*

>Glyma.13g040600.3.p sequence-type=predicted peptide transcript=Glyma.13g040600.3 locus=Glyma.13g040600 ID=Glyma.13g040600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPRRVQIEDPKYDDVPDADEPEETIRFKSSNSNVSDDQEPFMGIKVRRKASLHRDHKGDYLNVPSHPFLIKILQKQGDNEVLFADRVLKFTGSGKMKRCVLMITDSAIYIVDPEVDALKRRIVLAAVERVCLSELSDNFFAVIVPSEYDLLMASTRKTEIVTVLVEATKAKSATGFELDVVFSNRFEYNAASDLVKEVQFEEVEGGVKTRILRK*






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