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Report for Sequence Feature Glyma.13g040100

Feature Type:gene_model
Chromosome:Gm13
Start:11598603
stop:11602584
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.13g040100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53210.1AT SPCH JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
PTHR11514PantherFam MYC JGI N/AIEA
PF00010Pfam Helix-loop-helix DNA-binding domain JGI N/AIEA

Proteins Associated with Glyma.13g040100
LocusGene SymbolProtein Name
SPCH3 transcription factor SPEECHLESS-like

Gene model name correspondences to Glyma.13g040100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g08740 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.13g040100
>Glyma.13g040100.1 sequence-type=CDS polypeptide=Glyma.13g040100.1.p locus=Glyma.13g040100 id=Glyma.13g040100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAACCCCAGAAAAGTCTATTAATGGATGAAAGCTTATGTGATATTTTCAAAGACACAGAATTTGGGGACACACACTTTGGTGGAGGGGATCTCTTTTCCATTTTGGAGAGCATAGATGACTTGAAAGATTTTCCTCCCACCAACAACAATGAAGCTGTTATTGGCCGAACTTCAAAAGAAAATGAGCAAAATTCAAGAATGGTGTCCCAAAAGGTTTTAATATCTTCAAGTGCCCCACAAGATTCTGAAACTGAGCATGAAATCTCACCCAAAAGCAAGAGACAAAAGCTTCGTTCCACATCGCCAGAGGAACTACAGAAGGTGTCTCACATAACCGTGGAGCGCAACCGAAGAAAGCAAATGAATGAGAACCTGTTGGTCTTGAGGTCTCTTATGCCTTCCTTTTATGTCAAACGGGGAGACCAAGCATCAATAATTGGAGGCGTGGTTGATTACATCAACGAAATGCAGCAGCTGCTGCAGTGCCTAGAGGCCAAGAAACAAAGAAAAGTTTACATTGAAGTCCTAAGCCCTAGGCTAGTTTCAAGCCCAAGGCCCTCACCACTGAGCCCTAGAAAACCACCCTTGAGCCCTAGAATAAGCCTCCCCATTAGTCCAAGGACTCCACAACAACCTAGTAGCCCTTACAAGCCCAGGTTGCAGCCAGGATACCTTTCCCCAACCATAGCCAACTCTCCTACTTCTTCAGCTTCTTCTTCCATCAATGATAATATTAATGAGCTTGTTGCTAATTCAAAGTCCATTATAGCTGATGTTGAGGTCAAGTTTTCAGGTCCACATGTGCTTCTGAAGACTGTGTCACCACCAATTCCTGGCCAGGCCATGAGAATAATATCAGCTCTTGAAGACCTAGCACTAGAAATCCTCCATGTGAACATTAGCACTGCTGATGAAACCATGCTAAACTCATTCACTATTAAGATTGGAATTGAATGCCAACTCAGTGCTGAAGAACTCGCTCAACAAATCCAACAAACATTCTGCTAA
Predicted protein sequences of Glyma.13g040100
>Glyma.13g040100.1.p sequence-type=predicted peptide transcript=Glyma.13g040100.1 locus=Glyma.13g040100 id=Glyma.13g040100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEPQKSLLMDESLCDIFKDTEFGDTHFGGGDLFSILESIDDLKDFPPTNNNEAVIGRTSKENEQNSRMVSQKVLISSSAPQDSETEHEISPKSKRQKLRSTSPEELQKVSHITVERNRRKQMNENLLVLRSLMPSFYVKRGDQASIIGGVVDYINEMQQLLQCLEAKKQRKVYIEVLSPRLVSSPRPSPLSPRKPPLSPRISLPISPRTPQQPSSPYKPRLQPGYLSPTIANSPTSSASSSINDNINELVANSKSIIADVEVKFSGPHVLLKTVSPPIPGQAMRIISALEDLALEILHVNISTADETMLNSFTIKIGIECQLSAEELAQQIQQTFC*






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